RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 PRIM1P49642 420 aaKnown RBP17.08■□□□□ 0.33
TFE3-204ENST00000493583 POGZQ7Z3K3 1410 aa17.08■□□□□ 0.32
TFE3-204ENST00000493583 SYCE3A1L190 88 aa17.08■□□□□ 0.32
TFE3-204ENST00000493583 HDGFL2Q7Z4V5 671 aaPredicted RBP17.08■□□□□ 0.32
TFE3-204ENST00000493583 TSPOAP1O95153 1857 aa17.07■□□□□ 0.32
TFE3-204ENST00000493583 GOLGA6L22H0YM25 854 aa17.07■□□□□ 0.32
TFE3-204ENST00000493583 ZBTB7BO15156 539 aaPredicted RBP17.07■□□□□ 0.32
TFE3-204ENST00000493583 CALD1Q05682 793 aaKnown RBP17.07■□□□□ 0.32
TFE3-204ENST00000493583 ZNF830Q96NB3 372 aaPredicted RBP17.07■□□□□ 0.32
TFE3-204ENST00000493583 RBSNQ9H1K0 784 aa17.07■□□□□ 0.32
TFE3-204ENST00000493583 MYOM1P52179 1685 aa17.07■□□□□ 0.32
TFE3-204ENST00000493583 KIDINS220Q9ULH0 1771 aa17.07■□□□□ 0.32
TFE3-204ENST00000493583 PPRC1Q5VV67 1664 aaKnown RBP17.07■□□□□ 0.32
TFE3-204ENST00000493583 ABCA6Q8N139 1617 aa17.07■□□□□ 0.32
TFE3-204ENST00000493583 NPC1L1Q9UHC9 1359 aa17.06■□□□□ 0.32
TFE3-204ENST00000493583 A0A1W2PP64 1363 aa17.06■□□□□ 0.32
TFE3-204ENST00000493583 TERF2IPQ9NYB0 399 aa17.06■□□□□ 0.32
TFE3-204ENST00000493583 NINLQ9Y2I6 1382 aa17.06■□□□□ 0.32
TFE3-204ENST00000493583 RBM25P49756 843 aaKnown RBP17.05■□□□□ 0.32
TFE3-204ENST00000493583 MBIPQ9NS73 344 aa17.05■□□□□ 0.32
TFE3-204ENST00000493583 KDM5AP29375 1690 aaKnown RBP17.05■□□□□ 0.32
TFE3-204ENST00000493583 MROH2AA6NES4 1674 aa17.04■□□□□ 0.32
TFE3-204ENST00000493583 F6X3S4 739 aa17.04■□□□□ 0.32
TFE3-204ENST00000493583 TWISTNBQ3B726 338 aaPredicted RBP17.04■□□□□ 0.32
TFE3-204ENST00000493583 C17orf53Q8N3J3 647 aaPredicted RBP17.04■□□□□ 0.32
TFE3-204ENST00000493583 PPIP5K1Q6PFW1 1433 aa17.04■□□□□ 0.32
TFE3-204ENST00000493583 VAMP4O75379 141 aa17.03■□□□□ 0.32
TFE3-204ENST00000493583 NGEFQ8N5V2 710 aa17.03■□□□□ 0.32
TFE3-204ENST00000493583 MCM10Q7L590 875 aa17.03■□□□□ 0.32
TFE3-204ENST00000493583 STAC3Q96MF2 364 aa17.03■□□□□ 0.32
TFE3-204ENST00000493583 TET3O43151 1660 aa17.02■□□□□ 0.32
TFE3-204ENST00000493583 MAP4K4O95819 1239 aaPredicted RBP17.02■□□□□ 0.32
TFE3-204ENST00000493583 ZSCAN23Q3MJ62 389 aa17.02■□□□□ 0.32
TFE3-204ENST00000493583 CCDC27Q2M243 656 aa17.02■□□□□ 0.32
TFE3-204ENST00000493583 BMP2KLQ5H9B9 411 aa17.02■□□□□ 0.32
TFE3-204ENST00000493583 RNF17Q9BXT8 1623 aaKnown RBP17.02■□□□□ 0.32
TFE3-204ENST00000493583 KIF16BQ96L93 1317 aa17.02■□□□□ 0.32
TFE3-204ENST00000493583 DDIT3P35638 169 aa17.02■□□□□ 0.31
TFE3-204ENST00000493583 LTV1Q96GA3 475 aaPredicted RBP17.02■□□□□ 0.31
TFE3-204ENST00000493583 UPF3BQ9BZI7 483 aaKnown RBP17.02■□□□□ 0.31
TFE3-204ENST00000493583 IQGAP1P46940 1657 aa17.02■□□□□ 0.31
TFE3-204ENST00000493583 AEBP1Q8IUX7 1158 aa17.01■□□□□ 0.31
TFE3-204ENST00000493583 PTMAP06454 111 aaKnown RBP17.01■□□□□ 0.31
TFE3-204ENST00000493583 DNTTIP2Q5QJE6 756 aaKnown RBP17.01■□□□□ 0.31
TFE3-204ENST00000493583 ABCA9Q8IUA7 1624 aa17.01■□□□□ 0.31
TFE3-204ENST00000493583 EFCAB6Q5THR3 1501 aa17.01■□□□□ 0.31
TFE3-204ENST00000493583 INO80Q9ULG1 1556 aaPredicted RBP17■□□□□ 0.31
TFE3-204ENST00000493583 PLEKHM2Q8IWE5 1019 aa17■□□□□ 0.31
TFE3-204ENST00000493583 DDX54Q8TDD1 881 aaKnown RBP17■□□□□ 0.31
TFE3-204ENST00000493583 SLC52A1Q9NWF4 448 aa17■□□□□ 0.31
TFE3-204ENST00000493583 EXOC6BQ9Y2D4 811 aa17■□□□□ 0.31
TFE3-204ENST00000493583 CDC45O75419 566 aa17■□□□□ 0.31
TFE3-204ENST00000493583 MRPL50Q8N5N7 158 aaKnown RBP17■□□□□ 0.31
TFE3-204ENST00000493583 MAP3K4Q9Y6R4 1608 aa17■□□□□ 0.31
TFE3-204ENST00000493583 NEK4P51957 841 aa16.99■□□□□ 0.31
TFE3-204ENST00000493583 GPT2Q8TD30 523 aa16.99■□□□□ 0.31
TFE3-204ENST00000493583 MROH1Q8NDA8 1641 aa16.99■□□□□ 0.31
TFE3-204ENST00000493583 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.99■□□□□ 0.31
TFE3-204ENST00000493583 RILPL2Q969X0 211 aa16.99■□□□□ 0.31
TFE3-204ENST00000493583 KIF1BO60333 1816 aa16.99■□□□□ 0.31
TFE3-204ENST00000493583 SDSP20132 328 aa16.99■□□□□ 0.31
TFE3-204ENST00000493583 MEIS3Q99687 375 aa16.99■□□□□ 0.31
TFE3-204ENST00000493583 ZSCAN30Q86W11 494 aa16.98■□□□□ 0.31
TFE3-204ENST00000493583 SNX21Q969T3 373 aa16.98■□□□□ 0.31
TFE3-204ENST00000493583 POLKQ9UBT6 870 aa16.97■□□□□ 0.31
TFE3-204ENST00000493583 CHMP3Q9Y3E7 222 aa16.97■□□□□ 0.31
TFE3-204ENST00000493583 TMEM63CQ9P1W3 806 aa16.97■□□□□ 0.31
TFE3-204ENST00000493583 IQSEC2Q5JU85 1478 aa16.97■□□□□ 0.31
TFE3-204ENST00000493583 ZHX1Q9UKY1 873 aaPredicted RBP16.97■□□□□ 0.31
TFE3-204ENST00000493583 TRIM6-TRIM34B2RNG4 842 aa16.96■□□□□ 0.31
TFE3-204ENST00000493583 LMBRD1Q9NUN5 540 aa16.96■□□□□ 0.31
TFE3-204ENST00000493583 UQCRHLA0A096LP55 91 aa16.95■□□□□ 0.3
TFE3-204ENST00000493583 UQCRHP07919 91 aa16.95■□□□□ 0.3
TFE3-204ENST00000493583 RPGRIP1LQ68CZ1 1315 aa16.95■□□□□ 0.3
TFE3-204ENST00000493583 CCDC173Q0VFZ6 552 aa16.95■□□□□ 0.3
TFE3-204ENST00000493583 FRMPD1Q5SYB0 1578 aa16.95■□□□□ 0.3
TFE3-204ENST00000493583 SKOR2Q2VWA4 1001 aaPredicted RBP16.94■□□□□ 0.3
TFE3-204ENST00000493583 LMOD2Q6P5Q4 547 aa16.94■□□□□ 0.3
TFE3-204ENST00000493583 ABCC3O15438 1527 aa16.94■□□□□ 0.3
TFE3-204ENST00000493583 LAMC1P11047 1609 aa16.94■□□□□ 0.3
TFE3-204ENST00000493583 AAMPQ13685 434 aa16.94■□□□□ 0.3
TFE3-204ENST00000493583 KLHL40Q2TBA0 621 aa16.94■□□□□ 0.3
TFE3-204ENST00000493583 NUDT16Q96DE0 195 aaKnown RBP16.94■□□□□ 0.3
TFE3-204ENST00000493583 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
TFE3-204ENST00000493583 USP26Q9BXU7 913 aa16.93■□□□□ 0.3
TFE3-204ENST00000493583 ANKRD36BQ8N2N9 1353 aa16.93■□□□□ 0.3
TFE3-204ENST00000493583 FOXO3O43524 673 aa16.93■□□□□ 0.3
TFE3-204ENST00000493583 ANO2Q9NQ90 1003 aa16.93■□□□□ 0.3
TFE3-204ENST00000493583 SHPRHQ149N8 1683 aa16.93■□□□□ 0.3
TFE3-204ENST00000493583 GCC1Q96CN9 775 aa16.92■□□□□ 0.3
TFE3-204ENST00000493583 PALD1Q9ULE6 856 aa16.92■□□□□ 0.3
TFE3-204ENST00000493583 VIRMAQ69YN4 1812 aaKnown RBP16.92■□□□□ 0.3
TFE3-204ENST00000493583 GADD45BO75293 160 aaPredicted RBP16.92■□□□□ 0.3
TFE3-204ENST00000493583 G2E3Q7L622 706 aa16.92■□□□□ 0.3
TFE3-204ENST00000493583 NFE2L2Q16236 605 aa16.91■□□□□ 0.3
TFE3-204ENST00000493583 SULT6B1Q6IMI4 303 aa16.91■□□□□ 0.3
TFE3-204ENST00000493583 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.91■□□□□ 0.3
TFE3-204ENST00000493583 IL1RAPL2Q9NP60 686 aa16.91■□□□□ 0.3
TFE3-204ENST00000493583 SLC4A2P04920 1241 aa16.91■□□□□ 0.3
TFE3-204ENST00000493583 TTC22Q5TAA0 569 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms