RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 ERBINQ96RT1 1412 aa19.41■□□□□ 0.7
BRAT1-206ENST00000493232 PHF23Q9BUL5 403 aaPredicted RBP19.41■□□□□ 0.7
BRAT1-206ENST00000493232 C1orf115Q9H7X2 142 aa19.41■□□□□ 0.7
BRAT1-206ENST00000493232 FAM13BQ9NYF5 915 aa19.41■□□□□ 0.7
BRAT1-206ENST00000493232 HSP90AB2PQ58FF8 381 aa19.41■□□□□ 0.7
BRAT1-206ENST00000493232 ZFYVE27Q5T4F4 411 aa19.41■□□□□ 0.7
BRAT1-206ENST00000493232 ANKLE2Q86XL3 938 aa19.41■□□□□ 0.7
BRAT1-206ENST00000493232 TSPY26PQ9H489 355 aa19.41■□□□□ 0.7
BRAT1-206ENST00000493232 ZNF428Q96B54 188 aa19.41■□□□□ 0.7
BRAT1-206ENST00000493232 TRAK2O60296 914 aa19.4■□□□□ 0.7
BRAT1-206ENST00000493232 HECW1Q76N89 1606 aa19.4■□□□□ 0.7
BRAT1-206ENST00000493232 WWC2Q6AWC2 1192 aa19.4■□□□□ 0.7
BRAT1-206ENST00000493232 KRT18P05783 430 aaKnown RBP19.39■□□□□ 0.7
BRAT1-206ENST00000493232 ATF7IPQ6VMQ6 1270 aa19.39■□□□□ 0.7
BRAT1-206ENST00000493232 HMGB2P26583 209 aaKnown RBP19.39■□□□□ 0.69
BRAT1-206ENST00000493232 SMC2O95347 1197 aa19.39■□□□□ 0.69
BRAT1-206ENST00000493232 CCDC57Q2TAC2 916 aa19.39■□□□□ 0.69
BRAT1-206ENST00000493232 CAVIN1Q6NZI2 390 aaKnown RBP19.39■□□□□ 0.69
BRAT1-206ENST00000493232 PATL2C9JE40 543 aaKnown RBP19.38■□□□□ 0.69
BRAT1-206ENST00000493232 RNF214Q8ND24 703 aa19.38■□□□□ 0.69
BRAT1-206ENST00000493232 MPHOSPH8Q99549 860 aa19.38■□□□□ 0.69
BRAT1-206ENST00000493232 KDM4AO75164 1064 aa19.38■□□□□ 0.69
BRAT1-206ENST00000493232 TMEM132AQ24JP5 1023 aa19.37■□□□□ 0.69
BRAT1-206ENST00000493232 DACH1Q9UI36 760 aa19.37■□□□□ 0.69
BRAT1-206ENST00000493232 TOPBP1Q92547 1522 aa19.37■□□□□ 0.69
BRAT1-206ENST00000493232 MVPQ14764 893 aaKnown RBP19.37■□□□□ 0.69
BRAT1-206ENST00000493232 DDX54Q8TDD1 881 aaKnown RBP19.37■□□□□ 0.69
BRAT1-206ENST00000493232 FIBPO43427 364 aa19.36■□□□□ 0.69
BRAT1-206ENST00000493232 PRPF40AO75400 957 aaKnown RBP19.36■□□□□ 0.69
BRAT1-206ENST00000493232 FCHSD2O94868 740 aa19.36■□□□□ 0.69
BRAT1-206ENST00000493232 WDR33Q9C0J8 1336 aaKnown RBP19.36■□□□□ 0.69
BRAT1-206ENST00000493232 CCDC69A6NI79 296 aa19.36■□□□□ 0.69
BRAT1-206ENST00000493232 SF3B2Q13435 895 aaKnown RBP19.36■□□□□ 0.69
BRAT1-206ENST00000493232 SYCP1Q15431 976 aa19.36■□□□□ 0.69
BRAT1-206ENST00000493232 PRDM11Q9NQV5 511 aa19.35■□□□□ 0.69
BRAT1-206ENST00000493232 CTNNA3Q9UI47 895 aa19.35■□□□□ 0.69
BRAT1-206ENST00000493232 BCAR3O75815 825 aa19.34■□□□□ 0.69
BRAT1-206ENST00000493232 CDKL5O76039 1030 aa19.34■□□□□ 0.69
BRAT1-206ENST00000493232 STIM1Q13586 685 aa19.34■□□□□ 0.69
BRAT1-206ENST00000493232 SIL1Q9H173 461 aa19.34■□□□□ 0.69
BRAT1-206ENST00000493232 ZNHIT6Q9NWK9 470 aaKnown RBP19.34■□□□□ 0.69
BRAT1-206ENST00000493232 SOGA3Q5TF21 947 aa19.34■□□□□ 0.69
BRAT1-206ENST00000493232 NOL7Q9UMY1 257 aaKnown RBP19.34■□□□□ 0.69
BRAT1-206ENST00000493232 MTERF4Q7Z6M4 381 aaKnown RBP19.33■□□□□ 0.69
BRAT1-206ENST00000493232 DCTN1Q14203 1278 aa19.33■□□□□ 0.69
BRAT1-206ENST00000493232 CEP126Q9P2H0 1117 aa19.33■□□□□ 0.69
BRAT1-206ENST00000493232 LUC7LQ9NQ29 371 aaKnown RBP19.33■□□□□ 0.68
BRAT1-206ENST00000493232 NBPF8Q3BBV2 869 aa19.33■□□□□ 0.68
BRAT1-206ENST00000493232 DAPK1P53355 1430 aa19.32■□□□□ 0.68
BRAT1-206ENST00000493232 RPAP2Q8IXW5 612 aaPredicted RBP19.32■□□□□ 0.68
BRAT1-206ENST00000493232 ZSCAN31Q96LW9 406 aaPredicted RBP19.32■□□□□ 0.68
BRAT1-206ENST00000493232 FMNL2Q96PY5 1086 aa19.32■□□□□ 0.68
BRAT1-206ENST00000493232 BTBD11A6QL63 1104 aa19.32■□□□□ 0.68
BRAT1-206ENST00000493232 KRT85P78386 507 aa19.32■□□□□ 0.68
BRAT1-206ENST00000493232 KRT32Q14532 448 aa19.32■□□□□ 0.68
BRAT1-206ENST00000493232 AACSQ86V21 672 aa19.32■□□□□ 0.68
BRAT1-206ENST00000493232 CCDC192P0DO97 292 aa19.32■□□□□ 0.68
BRAT1-206ENST00000493232 PDIA4P13667 645 aaKnown RBP19.32■□□□□ 0.68
BRAT1-206ENST00000493232 MYL6BP14649 208 aa19.32■□□□□ 0.68
BRAT1-206ENST00000493232 NOM1Q5C9Z4 860 aaKnown RBP19.32■□□□□ 0.68
BRAT1-206ENST00000493232 CHD1LQ86WJ1 897 aa19.32■□□□□ 0.68
BRAT1-206ENST00000493232 K7ELQ4 463 aaPredicted RBP19.31■□□□□ 0.68
BRAT1-206ENST00000493232 ATP2B2Q01814 1243 aa19.31■□□□□ 0.68
BRAT1-206ENST00000493232 TXLNBQ8N3L3 684 aa19.31■□□□□ 0.68
BRAT1-206ENST00000493232 SRGAP3O43295 1099 aa19.31■□□□□ 0.68
BRAT1-206ENST00000493232 KCNH5Q8NCM2 988 aa19.31■□□□□ 0.68
BRAT1-206ENST00000493232 BLOC1S2Q6QNY1 142 aa19.31■□□□□ 0.68
BRAT1-206ENST00000493232 NFE2L2Q16236 605 aa19.3■□□□□ 0.68
BRAT1-206ENST00000493232 TTLL5Q6EMB2 1281 aa19.3■□□□□ 0.68
BRAT1-206ENST00000493232 POLA1P09884 1462 aaPredicted RBP19.3■□□□□ 0.68
BRAT1-206ENST00000493232 CEBPZQ03701 1054 aaKnown RBP19.29■□□□□ 0.68
BRAT1-206ENST00000493232 ME1P48163 572 aa19.29■□□□□ 0.68
BRAT1-206ENST00000493232 SLC26A8Q96RN1 970 aa19.29■□□□□ 0.68
BRAT1-206ENST00000493232 MAP7D2Q96T17 732 aa19.29■□□□□ 0.68
BRAT1-206ENST00000493232 BRPF1P55201 1214 aaPredicted RBP19.29■□□□□ 0.68
BRAT1-206ENST00000493232 SERPINC1P01008 464 aa19.28■□□□□ 0.68
BRAT1-206ENST00000493232 TNMDQ9H2S6 317 aa19.28■□□□□ 0.68
BRAT1-206ENST00000493232 NUTM2BA6NNL0 878 aaPredicted RBP19.28■□□□□ 0.68
BRAT1-206ENST00000493232 NUTM2EB1AL46 878 aaPredicted RBP19.28■□□□□ 0.68
BRAT1-206ENST00000493232 LARP1BQ659C4 914 aaKnown RBP19.28■□□□□ 0.68
BRAT1-206ENST00000493232 NUTM2AQ8IVF1 878 aaPredicted RBP19.28■□□□□ 0.68
BRAT1-206ENST00000493232 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
BRAT1-206ENST00000493232 STK3Q13188 491 aa19.28■□□□□ 0.68
BRAT1-206ENST00000493232 CCDC61Q9Y6R9 512 aa19.28■□□□□ 0.68
BRAT1-206ENST00000493232 HMGN5P82970 282 aaKnown RBP19.28■□□□□ 0.68
BRAT1-206ENST00000493232 FKBP4Q02790 459 aaKnown RBP eCLIP19.28■□□□□ 0.68
BRAT1-206ENST00000493232 UBAC1Q9BSL1 405 aa19.28■□□□□ 0.68
BRAT1-206ENST00000493232 PPFIBP1Q86W92 1011 aa19.27■□□□□ 0.68
BRAT1-206ENST00000493232 SYNJ1O43426 1573 aa19.27■□□□□ 0.68
BRAT1-206ENST00000493232 GNAT3A8MTJ3 354 aa19.27■□□□□ 0.68
BRAT1-206ENST00000493232 NUP133Q8WUM0 1156 aa19.27■□□□□ 0.68
BRAT1-206ENST00000493232 PRXQ9BXM0 1461 aa19.27■□□□□ 0.68
BRAT1-206ENST00000493232 WASF1Q92558 559 aa19.27■□□□□ 0.67
BRAT1-206ENST00000493232 TDO2P48775 406 aa19.26■□□□□ 0.67
BRAT1-206ENST00000493232 VSIG10Q8N0Z9 540 aa19.26■□□□□ 0.67
BRAT1-206ENST00000493232 PDRG1Q9NUG6 133 aa19.26■□□□□ 0.67
BRAT1-206ENST00000493232 SUPT6HQ7KZ85 1726 aaKnown RBP19.26■□□□□ 0.67
BRAT1-206ENST00000493232 IGHMBP2P38935 993 aaKnown RBP19.26■□□□□ 0.67
BRAT1-206ENST00000493232 RRS1Q15050 365 aaKnown RBP19.26■□□□□ 0.67
BRAT1-206ENST00000493232 CBFA2T2O43439 604 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms