RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 PDE3AQ14432 1141 aa16.25■□□□□ 0.19
TRIM11-204ENST00000493030 POLA1P09884 1462 aaPredicted RBP16.25■□□□□ 0.19
TRIM11-204ENST00000493030 MPHOSPH8Q99549 860 aa16.24■□□□□ 0.19
TRIM11-204ENST00000493030 MCM2P49736 904 aa16.24■□□□□ 0.19
TRIM11-204ENST00000493030 PNISRQ8TF01 805 aaKnown RBP16.24■□□□□ 0.19
TRIM11-204ENST00000493030 PRDM11Q9NQV5 511 aa16.24■□□□□ 0.19
TRIM11-204ENST00000493030 CDR1P51861 262 aa16.24■□□□□ 0.19
TRIM11-204ENST00000493030 CCDC173Q0VFZ6 552 aa16.24■□□□□ 0.19
TRIM11-204ENST00000493030 CCDC57Q2TAC2 916 aa16.24■□□□□ 0.19
TRIM11-204ENST00000493030 RTEL1-TNFRSF6BF6WH68 1400 aa16.24■□□□□ 0.19
TRIM11-204ENST00000493030 PRXQ9BXM0 1461 aa16.24■□□□□ 0.19
TRIM11-204ENST00000493030 RAPGEF3O95398 923 aa16.23■□□□□ 0.19
TRIM11-204ENST00000493030 ZNF396Q96N95 335 aaPredicted RBP16.23■□□□□ 0.19
TRIM11-204ENST00000493030 CCDC39Q9UFE4 941 aa16.23■□□□□ 0.19
TRIM11-204ENST00000493030 CYP46A1Q9Y6A2 500 aa16.23■□□□□ 0.19
TRIM11-204ENST00000493030 HFM1A2PYH4 1435 aa16.23■□□□□ 0.19
TRIM11-204ENST00000493030 C9orf84Q5VXU9 1444 aa16.23■□□□□ 0.19
TRIM11-204ENST00000493030 MRE11P49959 708 aa16.23■□□□□ 0.19
TRIM11-204ENST00000493030 FKBP4Q02790 459 aaKnown RBP eCLIP16.23■□□□□ 0.19
TRIM11-204ENST00000493030 LAMC3Q9Y6N6 1575 aa16.23■□□□□ 0.19
TRIM11-204ENST00000493030 NACAP1Q9BZK3 213 aa16.23■□□□□ 0.19
TRIM11-204ENST00000493030 NBPF8Q3BBV2 869 aa16.23■□□□□ 0.19
TRIM11-204ENST00000493030 MAGEC2Q9UBF1 373 aaPredicted RBP16.23■□□□□ 0.19
TRIM11-204ENST00000493030 MBD3O95983 291 aa16.22■□□□□ 0.19
TRIM11-204ENST00000493030 SF3B2Q13435 895 aaKnown RBP16.22■□□□□ 0.19
TRIM11-204ENST00000493030 HSP90B2PQ58FF3 399 aa16.22■□□□□ 0.19
TRIM11-204ENST00000493030 ACBD3Q9H3P7 528 aa16.22■□□□□ 0.19
TRIM11-204ENST00000493030 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
TRIM11-204ENST00000493030 LETM1O95202 739 aaPredicted RBP16.22■□□□□ 0.19
TRIM11-204ENST00000493030 FILIP1LQ4L180 1135 aa16.22■□□□□ 0.19
TRIM11-204ENST00000493030 SLC52A1Q9NWF4 448 aa16.22■□□□□ 0.19
TRIM11-204ENST00000493030 RBM5P52756 815 aaKnown RBP eCLIP16.21■□□□□ 0.19
TRIM11-204ENST00000493030 NUP133Q8WUM0 1156 aa16.21■□□□□ 0.19
TRIM11-204ENST00000493030 AACSQ86V21 672 aa16.21■□□□□ 0.19
TRIM11-204ENST00000493030 ANKLE2Q86XL3 938 aa16.21■□□□□ 0.19
TRIM11-204ENST00000493030 BTBD11A6QL63 1104 aa16.21■□□□□ 0.19
TRIM11-204ENST00000493030 TSPY26PQ9H489 355 aa16.21■□□□□ 0.19
TRIM11-204ENST00000493030 ATF7IPQ6VMQ6 1270 aa16.21■□□□□ 0.18
TRIM11-204ENST00000493030 SRGAP3O43295 1099 aa16.2■□□□□ 0.18
TRIM11-204ENST00000493030 TRIM22Q8IYM9 498 aa16.2■□□□□ 0.18
TRIM11-204ENST00000493030 CCDC69A6NI79 296 aa16.2■□□□□ 0.18
TRIM11-204ENST00000493030 PIP4K2BP78356 416 aa16.2■□□□□ 0.18
TRIM11-204ENST00000493030 CCDC85AQ96PX6 553 aaPredicted RBP16.2■□□□□ 0.18
TRIM11-204ENST00000493030 ZHX3Q9H4I2 956 aa16.2■□□□□ 0.18
TRIM11-204ENST00000493030 KIAA1107Q9UPP5 1409 aa16.2■□□□□ 0.18
TRIM11-204ENST00000493030 ZC3H6P61129 1189 aaKnown RBP16.19■□□□□ 0.18
TRIM11-204ENST00000493030 BICDL1Q6ZP65 573 aa16.19■□□□□ 0.18
TRIM11-204ENST00000493030 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
TRIM11-204ENST00000493030 WWC2Q6AWC2 1192 aa16.19■□□□□ 0.18
TRIM11-204ENST00000493030 WDR63Q8IWG1 891 aa16.19■□□□□ 0.18
TRIM11-204ENST00000493030 SMARCE1Q969G3 411 aa16.19■□□□□ 0.18
TRIM11-204ENST00000493030 SKIDA1Q1XH10 827 aa16.18■□□□□ 0.18
TRIM11-204ENST00000493030 JMYQ8N9B5 988 aa16.18■□□□□ 0.18
TRIM11-204ENST00000493030 IL1RAPL2Q9NP60 686 aa16.18■□□□□ 0.18
TRIM11-204ENST00000493030 ME1P48163 572 aa16.18■□□□□ 0.18
TRIM11-204ENST00000493030 AKNAQ7Z591 1439 aa16.17■□□□□ 0.18
TRIM11-204ENST00000493030 SYCP1Q15431 976 aa16.17■□□□□ 0.18
TRIM11-204ENST00000493030 PAF1Q8N7H5 531 aa16.17■□□□□ 0.18
TRIM11-204ENST00000493030 ARAP1Q96P48 1450 aa16.17■□□□□ 0.18
TRIM11-204ENST00000493030 ERBINQ96RT1 1412 aa16.17■□□□□ 0.18
TRIM11-204ENST00000493030 MVPQ14764 893 aaKnown RBP16.17■□□□□ 0.18
TRIM11-204ENST00000493030 ANKRD1Q15327 319 aa16.17■□□□□ 0.18
TRIM11-204ENST00000493030 SPC24Q8NBT2 197 aa16.17■□□□□ 0.18
TRIM11-204ENST00000493030 CEP126Q9P2H0 1117 aa16.16■□□□□ 0.18
TRIM11-204ENST00000493030 CWC27Q6UX04 472 aaKnown RBP16.16■□□□□ 0.18
TRIM11-204ENST00000493030 ZSCAN29Q8IWY8 852 aaPredicted RBP16.16■□□□□ 0.18
TRIM11-204ENST00000493030 ZSCAN25Q6NSZ9 544 aa16.16■□□□□ 0.18
TRIM11-204ENST00000493030 SERPINC1P01008 464 aa16.16■□□□□ 0.18
TRIM11-204ENST00000493030 SOGA3Q5TF21 947 aa16.16■□□□□ 0.18
TRIM11-204ENST00000493030 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
TRIM11-204ENST00000493030 TDO2P48775 406 aa16.15■□□□□ 0.18
TRIM11-204ENST00000493030 RAI14Q9P0K7 980 aa16.15■□□□□ 0.18
TRIM11-204ENST00000493030 LARP1BQ659C4 914 aaKnown RBP16.15■□□□□ 0.18
TRIM11-204ENST00000493030 MIS18AQ9NYP9 233 aa16.15■□□□□ 0.18
TRIM11-204ENST00000493030 EFCAB5A4FU69 1503 aa16.15■□□□□ 0.18
TRIM11-204ENST00000493030 RDXP35241 583 aaKnown RBP16.14■□□□□ 0.17
TRIM11-204ENST00000493030 PIP4K2AP48426 406 aaPredicted RBP16.14■□□□□ 0.17
TRIM11-204ENST00000493030 AEBP1Q8IUX7 1158 aa16.14■□□□□ 0.17
TRIM11-204ENST00000493030 CT47B1P0C2W7 299 aaPredicted RBP16.14■□□□□ 0.17
TRIM11-204ENST00000493030 BLOC1S2Q6QNY1 142 aa16.14■□□□□ 0.17
TRIM11-204ENST00000493030 PDCL3Q9H2J4 239 aa16.14■□□□□ 0.17
TRIM11-204ENST00000493030 TNMDQ9H2S6 317 aa16.14■□□□□ 0.17
TRIM11-204ENST00000493030 PLEKHH2Q8IVE3 1493 aa16.13■□□□□ 0.17
TRIM11-204ENST00000493030 K7ELQ4 463 aaPredicted RBP16.13■□□□□ 0.17
TRIM11-204ENST00000493030 PIBF1Q8WXW3 757 aa16.13■□□□□ 0.17
TRIM11-204ENST00000493030 JAKMIP1Q96N16 626 aaKnown RBP16.13■□□□□ 0.17
TRIM11-204ENST00000493030 UBAC1Q9BSL1 405 aa16.13■□□□□ 0.17
TRIM11-204ENST00000493030 TANGO6Q9C0B7 1094 aa16.13■□□□□ 0.17
TRIM11-204ENST00000493030 LRP2BPQ9P2M1 347 aa16.13■□□□□ 0.17
TRIM11-204ENST00000493030 ABCA10Q8WWZ4 1543 aa16.13■□□□□ 0.17
TRIM11-204ENST00000493030 IDH1O75874 414 aaKnown RBP16.13■□□□□ 0.17
TRIM11-204ENST00000493030 ZNHIT6Q9NWK9 470 aaKnown RBP16.13■□□□□ 0.17
TRIM11-204ENST00000493030 WDR33Q9C0J8 1336 aaKnown RBP16.12■□□□□ 0.17
TRIM11-204ENST00000493030 MPNDQ8N594 471 aa16.12■□□□□ 0.17
TRIM11-204ENST00000493030 ATAD2Q6PL18 1390 aa16.12■□□□□ 0.17
TRIM11-204ENST00000493030 FCHSD2O94868 740 aa16.12■□□□□ 0.17
TRIM11-204ENST00000493030 KRT85P78386 507 aa16.12■□□□□ 0.17
TRIM11-204ENST00000493030 NUDT16Q96DE0 195 aaKnown RBP16.12■□□□□ 0.17
TRIM11-204ENST00000493030 PDRG1Q9NUG6 133 aa16.12■□□□□ 0.17
TRIM11-204ENST00000493030 MYO6Q9UM54 1294 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms