RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 PUS10Q3MIT2 529 aaKnown RBP6.76□□□□□ -1.33
CLIP4-211ENST00000491701 CCDC18Q5T9S5 1454 aa6.75□□□□□ -1.33
CLIP4-211ENST00000491701 GPATCH8Q9UKJ3 1502 aaKnown RBP6.75□□□□□ -1.33
CLIP4-211ENST00000491701 AEBP1Q8IUX7 1158 aa6.75□□□□□ -1.33
CLIP4-211ENST00000491701 CLUAP1Q96AJ1 413 aa6.75□□□□□ -1.33
CLIP4-211ENST00000491701 CDC42BPAQ5VT25 1732 aa6.75□□□□□ -1.33
CLIP4-211ENST00000491701 ZNF644Q9H582 1327 aaPredicted RBP6.74□□□□□ -1.33
CLIP4-211ENST00000491701 CDC42BPBQ9Y5S2 1711 aa6.74□□□□□ -1.33
CLIP4-211ENST00000491701 PLEKHG3A1L390 1219 aa6.74□□□□□ -1.33
CLIP4-211ENST00000491701 KDM4AO75164 1064 aa6.74□□□□□ -1.33
CLIP4-211ENST00000491701 GCGRP47871 477 aa6.74□□□□□ -1.33
CLIP4-211ENST00000491701 FUT2Q10981 343 aa6.74□□□□□ -1.33
CLIP4-211ENST00000491701 CRIPAKQ8N1N5 446 aa6.74□□□□□ -1.33
CLIP4-211ENST00000491701 DDRGK1Q96HY6 314 aa6.74□□□□□ -1.33
CLIP4-211ENST00000491701 SPSB2Q99619 263 aa6.74□□□□□ -1.33
CLIP4-211ENST00000491701 MTMR7Q9Y216 660 aa6.74□□□□□ -1.33
CLIP4-211ENST00000491701 TCOF1Q13428 1488 aaKnown RBP6.74□□□□□ -1.33
CLIP4-211ENST00000491701 EHBP1L1Q8N3D4 1523 aa6.73□□□□□ -1.33
CLIP4-211ENST00000491701 SUPT6HQ7KZ85 1726 aaKnown RBP6.73□□□□□ -1.33
CLIP4-211ENST00000491701 CSPP1Q1MSJ5 1256 aa6.73□□□□□ -1.33
CLIP4-211ENST00000491701 TMCO4Q5TGY1 634 aa6.73□□□□□ -1.33
CLIP4-211ENST00000491701 POLR3EQ9NVU0 708 aa6.73□□□□□ -1.33
CLIP4-211ENST00000491701 TOR4AQ9NXH8 423 aa6.73□□□□□ -1.33
CLIP4-211ENST00000491701 GMPR2Q9P2T1 348 aaKnown RBP6.73□□□□□ -1.33
CLIP4-211ENST00000491701 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.72□□□□□ -1.33
CLIP4-211ENST00000491701 AVPP01185 164 aa6.72□□□□□ -1.33
CLIP4-211ENST00000491701 SPIRE2Q8WWL2 714 aa6.72□□□□□ -1.33
CLIP4-211ENST00000491701 TBC1D2Q9BYX2 928 aa6.72□□□□□ -1.33
CLIP4-211ENST00000491701 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.72□□□□□ -1.33
CLIP4-211ENST00000491701 MYOM3Q5VTT5 1437 aa6.72□□□□□ -1.33
CLIP4-211ENST00000491701 FGD6Q6ZV73 1430 aa6.72□□□□□ -1.33
CLIP4-211ENST00000491701 CCNB3Q8WWL7 1395 aa6.71□□□□□ -1.33
CLIP4-211ENST00000491701 NDUFV2P19404 249 aa6.71□□□□□ -1.34
CLIP4-211ENST00000491701 GUCA2AQ02747 115 aa6.71□□□□□ -1.34
CLIP4-211ENST00000491701 HLA-CQ95604 372 aa6.71□□□□□ -1.34
CLIP4-211ENST00000491701 TSPOAP1O95153 1857 aa6.7□□□□□ -1.34
CLIP4-211ENST00000491701 MTUS2Q5JR59 1369 aa6.7□□□□□ -1.34
CLIP4-211ENST00000491701 WFS1O76024 890 aa6.7□□□□□ -1.34
CLIP4-211ENST00000491701 ATP6V1AP38606 617 aa6.7□□□□□ -1.34
CLIP4-211ENST00000491701 RPIAP49247 311 aa6.7□□□□□ -1.34
CLIP4-211ENST00000491701 GRIPAP1Q4V328 841 aa6.7□□□□□ -1.34
CLIP4-211ENST00000491701 TTC37Q6PGP7 1564 aa6.7□□□□□ -1.34
CLIP4-211ENST00000491701 PTPN23Q9H3S7 1636 aa6.7□□□□□ -1.34
CLIP4-211ENST00000491701 ARHGEF12Q9NZN5 1544 aa6.7□□□□□ -1.34
CLIP4-211ENST00000491701 PLEKHD1A6NEE1 506 aa6.69□□□□□ -1.34
CLIP4-211ENST00000491701 MOXD2PA6NHM9 499 aa6.69□□□□□ -1.34
CLIP4-211ENST00000491701 AXIN1O15169 862 aa6.69□□□□□ -1.34
CLIP4-211ENST00000491701 NFX1Q12986 1120 aaKnown RBP6.69□□□□□ -1.34
CLIP4-211ENST00000491701 GOPCQ9HD26 462 aa6.69□□□□□ -1.34
CLIP4-211ENST00000491701 SERPINA10Q9UK55 444 aa6.69□□□□□ -1.34
CLIP4-211ENST00000491701 FCF1Q9Y324 198 aaKnown RBP6.69□□□□□ -1.34
CLIP4-211ENST00000491701 ABCC5O15440 1437 aa6.68□□□□□ -1.34
CLIP4-211ENST00000491701 MIA2Q96PC5 1412 aa6.68□□□□□ -1.34
CLIP4-211ENST00000491701 C11orf95C9JLR9 678 aaPredicted RBP6.68□□□□□ -1.34
CLIP4-211ENST00000491701 RBM25P49756 843 aaKnown RBP6.68□□□□□ -1.34
CLIP4-211ENST00000491701 MFAP1P55081 439 aaKnown RBP6.68□□□□□ -1.34
CLIP4-211ENST00000491701 DIXDC1Q155Q3 683 aa6.68□□□□□ -1.34
CLIP4-211ENST00000491701 CYP4X1Q8N118 509 aa6.68□□□□□ -1.34
CLIP4-211ENST00000491701 GZF1Q9H116 711 aaPredicted RBP6.68□□□□□ -1.34
CLIP4-211ENST00000491701 ZNF777Q9ULD5 760 aaPredicted RBP6.68□□□□□ -1.34
CLIP4-211ENST00000491701 MBD5Q9P267 1494 aa6.68□□□□□ -1.34
CLIP4-211ENST00000491701 MAPKBP1O60336 1514 aa6.68□□□□□ -1.34
CLIP4-211ENST00000491701 ASXL2Q76L83 1435 aa6.68□□□□□ -1.34
CLIP4-211ENST00000491701 KDM6BO15054 1643 aa6.68□□□□□ -1.34
CLIP4-211ENST00000491701 HOXA2O43364 376 aa6.67□□□□□ -1.34
CLIP4-211ENST00000491701 USP46P62068 366 aa6.67□□□□□ -1.34
CLIP4-211ENST00000491701 MYSM1Q5VVJ2 828 aa6.67□□□□□ -1.34
CLIP4-211ENST00000491701 RIC3Q7Z5B4 369 aa6.67□□□□□ -1.34
CLIP4-211ENST00000491701 FAM160A2Q8N612 972 aaPredicted RBP6.67□□□□□ -1.34
CLIP4-211ENST00000491701 THAP11Q96EK4 314 aa6.67□□□□□ -1.34
CLIP4-211ENST00000491701 CCDC97Q96F63 343 aaPredicted RBP6.67□□□□□ -1.34
CLIP4-211ENST00000491701 SAMD9LQ8IVG5 1584 aa6.67□□□□□ -1.34
CLIP4-211ENST00000491701 DIP2BQ9P265 1576 aa6.67□□□□□ -1.34
CLIP4-211ENST00000491701 NUTM2BA6NNL0 878 aaPredicted RBP6.67□□□□□ -1.34
CLIP4-211ENST00000491701 NUTM2EB1AL46 878 aaPredicted RBP6.67□□□□□ -1.34
CLIP4-211ENST00000491701 C6orf229H3BNL8 230 aa6.67□□□□□ -1.34
CLIP4-211ENST00000491701 HMGB1P09429 215 aaKnown RBP6.67□□□□□ -1.34
CLIP4-211ENST00000491701 FDX1P10109 184 aa6.67□□□□□ -1.34
CLIP4-211ENST00000491701 CTC1Q2NKJ3 1217 aa6.67□□□□□ -1.34
CLIP4-211ENST00000491701 MORN1Q5T089 497 aa6.67□□□□□ -1.34
CLIP4-211ENST00000491701 LCE2CQ5TA81 110 aa6.67□□□□□ -1.34
CLIP4-211ENST00000491701 NUTM2DQ5VT03 806 aaPredicted RBP6.67□□□□□ -1.34
CLIP4-211ENST00000491701 FOXD4L5Q5VV16 416 aaPredicted RBP6.67□□□□□ -1.34
CLIP4-211ENST00000491701 NUTM2AQ8IVF1 878 aaPredicted RBP6.67□□□□□ -1.34
CLIP4-211ENST00000491701 FOXD4L4Q8WXT5 416 aaPredicted RBP6.67□□□□□ -1.34
CLIP4-211ENST00000491701 PRDM9Q9NQV7 894 aa6.67□□□□□ -1.34
CLIP4-211ENST00000491701 ABCA9Q8IUA7 1624 aa6.66□□□□□ -1.34
CLIP4-211ENST00000491701 PLCH2O75038 1416 aa6.66□□□□□ -1.34
CLIP4-211ENST00000491701 CD2BP2O95400 341 aaKnown RBP6.66□□□□□ -1.34
CLIP4-211ENST00000491701 CLK2P49760 499 aaKnown RBP6.66□□□□□ -1.34
CLIP4-211ENST00000491701 SMCPP49901 116 aaPredicted RBP6.66□□□□□ -1.34
CLIP4-211ENST00000491701 PCMTD1Q96MG8 357 aaPredicted RBP6.66□□□□□ -1.34
CLIP4-211ENST00000491701 SLC27A5Q9Y2P5 690 aa6.66□□□□□ -1.34
CLIP4-211ENST00000491701 PREX2Q70Z35 1606 aa6.66□□□□□ -1.34
CLIP4-211ENST00000491701 PPRC1Q5VV67 1664 aaKnown RBP6.65□□□□□ -1.34
CLIP4-211ENST00000491701 DENND4BO75064 1496 aaPredicted RBP6.65□□□□□ -1.34
CLIP4-211ENST00000491701 WDR7Q9Y4E6 1490 aa6.65□□□□□ -1.34
CLIP4-211ENST00000491701 WIPF1O43516 503 aa6.65□□□□□ -1.35
CLIP4-211ENST00000491701 FAM69CQ0P6D2 419 aa6.65□□□□□ -1.35
CLIP4-211ENST00000491701 PROCA1Q8NCQ7 364 aaPredicted RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms