RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 QRICH2Q9H0J4 1663 aa16.08■□□□□ 0.17
SRGAP3-210ENST00000491467 PNISRQ8TF01 805 aaKnown RBP16.08■□□□□ 0.16
SRGAP3-210ENST00000491467 SGIP1Q9BQI5 828 aa16.08■□□□□ 0.16
SRGAP3-210ENST00000491467 PANK3Q9H999 370 aa16.08■□□□□ 0.16
SRGAP3-210ENST00000491467 MAP3K5Q99683 1374 aa16.08■□□□□ 0.16
SRGAP3-210ENST00000491467 CDC42BPGQ6DT37 1551 aa16.08■□□□□ 0.16
SRGAP3-210ENST00000491467 KIF1AQ12756 1690 aa16.08■□□□□ 0.16
SRGAP3-210ENST00000491467 SUPT16HQ9Y5B9 1047 aaKnown RBP16.07■□□□□ 0.16
SRGAP3-210ENST00000491467 ADGRB1O14514 1584 aa16.07■□□□□ 0.16
SRGAP3-210ENST00000491467 PSME1Q06323 249 aa16.06■□□□□ 0.16
SRGAP3-210ENST00000491467 ARHGEF28Q8N1W1 1705 aaKnown RBP16.05■□□□□ 0.16
SRGAP3-210ENST00000491467 ERICH6BQ5W0A0 696 aa16.05■□□□□ 0.16
SRGAP3-210ENST00000491467 STK32BQ9NY57 414 aa16.05■□□□□ 0.16
SRGAP3-210ENST00000491467 WDR90Q96KV7 1748 aa16.05■□□□□ 0.16
SRGAP3-210ENST00000491467 SPATA31A1Q5TZJ5 1347 aa16.04■□□□□ 0.16
SRGAP3-210ENST00000491467 CENPJQ9HC77 1338 aaPredicted RBP16.04■□□□□ 0.16
SRGAP3-210ENST00000491467 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
SRGAP3-210ENST00000491467 RGPD8O14715 1765 aaPredicted RBP16.03■□□□□ 0.16
SRGAP3-210ENST00000491467 PLSCR1O15162 318 aa16.03■□□□□ 0.16
SRGAP3-210ENST00000491467 GRIN3BO60391 1043 aa16.03■□□□□ 0.16
SRGAP3-210ENST00000491467 SBF2Q86WG5 1849 aa16.03■□□□□ 0.16
SRGAP3-210ENST00000491467 AATKQ6ZMQ8 1374 aa16.02■□□□□ 0.16
SRGAP3-210ENST00000491467 USP35Q9P2H5 1018 aa16.02■□□□□ 0.16
SRGAP3-210ENST00000491467 ARHGEF10O15013 1369 aa16■□□□□ 0.15
SRGAP3-210ENST00000491467 SLC15A2Q16348 729 aa16■□□□□ 0.15
SRGAP3-210ENST00000491467 KLRG1Q96E93 195 aa16■□□□□ 0.15
SRGAP3-210ENST00000491467 JMYQ8N9B5 988 aa15.99■□□□□ 0.15
SRGAP3-210ENST00000491467 STRN4Q9NRL3 753 aa15.99■□□□□ 0.15
SRGAP3-210ENST00000491467 SMG6Q86US8 1419 aaKnown RBP15.97■□□□□ 0.15
SRGAP3-210ENST00000491467 FKBP8Q14318 412 aa15.97■□□□□ 0.15
SRGAP3-210ENST00000491467 KIF3CO14782 793 aa15.96■□□□□ 0.15
SRGAP3-210ENST00000491467 YBX3P16989 372 aaKnown RBP eCLIP15.96■□□□□ 0.15
SRGAP3-210ENST00000491467 AMER1Q5JTC6 1135 aaPredicted RBP15.96■□□□□ 0.15
SRGAP3-210ENST00000491467 FMN2Q9NZ56 1722 aa15.96■□□□□ 0.15
SRGAP3-210ENST00000491467 TECPR2O15040 1411 aa15.95■□□□□ 0.14
SRGAP3-210ENST00000491467 PROM2Q8N271 834 aa15.95■□□□□ 0.14
SRGAP3-210ENST00000491467 SBNO1A3KN83 1393 aa15.95■□□□□ 0.14
SRGAP3-210ENST00000491467 PCNTO95613 3336 aa15.94■□□□□ 0.14
SRGAP3-210ENST00000491467 HTRA3P83110 453 aa15.94■□□□□ 0.14
SRGAP3-210ENST00000491467 CC2D1BQ5T0F9 858 aaKnown RBP15.94■□□□□ 0.14
SRGAP3-210ENST00000491467 NLGN2Q8NFZ4 835 aa15.94■□□□□ 0.14
SRGAP3-210ENST00000491467 TRAK1Q9UPV9 953 aa15.94■□□□□ 0.14
SRGAP3-210ENST00000491467 EVC2Q86UK5 1308 aa15.94■□□□□ 0.14
SRGAP3-210ENST00000491467 PRDM11Q9NQV5 511 aa15.93■□□□□ 0.14
SRGAP3-210ENST00000491467 CNGB1Q14028 1251 aaPredicted RBP15.92■□□□□ 0.14
SRGAP3-210ENST00000491467 BARGINQ6ZT62 677 aa15.92■□□□□ 0.14
SRGAP3-210ENST00000491467 PHF8Q9UPP1 1060 aa15.92■□□□□ 0.14
SRGAP3-210ENST00000491467 FAM161AQ3B820 660 aa15.91■□□□□ 0.14
SRGAP3-210ENST00000491467 NUDCQ9Y266 331 aa15.91■□□□□ 0.14
SRGAP3-210ENST00000491467 ADCY9O60503 1353 aa15.9■□□□□ 0.14
SRGAP3-210ENST00000491467 PPP2R1AP30153 589 aa15.9■□□□□ 0.14
SRGAP3-210ENST00000491467 TMEM132EQ6IEE7 984 aa15.9■□□□□ 0.14
SRGAP3-210ENST00000491467 TNS2Q63HR2 1409 aa15.89■□□□□ 0.13
SRGAP3-210ENST00000491467 TOMM70O94826 608 aa15.89■□□□□ 0.13
SRGAP3-210ENST00000491467 POLD1P28340 1107 aa15.89■□□□□ 0.13
SRGAP3-210ENST00000491467 EVA1CP58658 441 aa15.89■□□□□ 0.13
SRGAP3-210ENST00000491467 TXNRD1Q16881 649 aa15.89■□□□□ 0.13
SRGAP3-210ENST00000491467 YTHDC2Q9H6S0 1430 aaKnown RBP15.88■□□□□ 0.13
SRGAP3-210ENST00000491467 PTF1AQ7RTS3 328 aa15.88■□□□□ 0.13
SRGAP3-210ENST00000491467 TOPAZ1Q8N9V7 1692 aa15.88■□□□□ 0.13
SRGAP3-210ENST00000491467 OVOS2A0A0G2JMS6 1433 aa15.87■□□□□ 0.13
SRGAP3-210ENST00000491467 OVOS2A0A0J9YW53 1432 aa15.87■□□□□ 0.13
SRGAP3-210ENST00000491467 OVOS2Q6IE36 1432 aa15.87■□□□□ 0.13
SRGAP3-210ENST00000491467 NGEFQ8N5V2 710 aa15.87■□□□□ 0.13
SRGAP3-210ENST00000491467 KNDC1Q76NI1 1749 aa15.87■□□□□ 0.13
SRGAP3-210ENST00000491467 PEAK1Q9H792 1746 aa15.87■□□□□ 0.13
SRGAP3-210ENST00000491467 PARP4Q9UKK3 1724 aaKnown RBP15.87■□□□□ 0.13
SRGAP3-210ENST00000491467 NSD2O96028 1365 aa15.87■□□□□ 0.13
SRGAP3-210ENST00000491467 TULP4Q9NRJ4 1543 aa15.86■□□□□ 0.13
SRGAP3-210ENST00000491467 HSPA1AP0DMV8 641 aaKnown RBP15.86■□□□□ 0.13
SRGAP3-210ENST00000491467 HSPA1BP0DMV9 641 aaKnown RBP15.86■□□□□ 0.13
SRGAP3-210ENST00000491467 CHRNA2Q15822 529 aa15.86■□□□□ 0.13
SRGAP3-210ENST00000491467 WAPLQ7Z5K2 1190 aa15.86■□□□□ 0.13
SRGAP3-210ENST00000491467 ANKRD26Q9UPS8 1709 aa15.85■□□□□ 0.13
SRGAP3-210ENST00000491467 TCP11L2Q8N4U5 519 aa15.84■□□□□ 0.13
SRGAP3-210ENST00000491467 SIRT1Q96EB6 747 aa15.84■□□□□ 0.13
SRGAP3-210ENST00000491467 CARD14Q9BXL6 1004 aa15.84■□□□□ 0.13
SRGAP3-210ENST00000491467 CRYBG1Q9Y4K1 1723 aa15.84■□□□□ 0.13
SRGAP3-210ENST00000491467 RNF123Q5XPI4 1314 aa15.84■□□□□ 0.13
SRGAP3-210ENST00000491467 ANKRD36BQ8N2N9 1353 aa15.84■□□□□ 0.13
SRGAP3-210ENST00000491467 ALS2Q96Q42 1657 aa15.83■□□□□ 0.13
SRGAP3-210ENST00000491467 WDR43Q15061 677 aaKnown RBP eCLIP15.83■□□□□ 0.12
SRGAP3-210ENST00000491467 TRPM3Q9HCF6 1732 aaPredicted RBP15.82■□□□□ 0.12
SRGAP3-210ENST00000491467 CGNL1Q0VF96 1302 aa15.82■□□□□ 0.12
SRGAP3-210ENST00000491467 POLR3AO14802 1390 aaPredicted RBP15.82■□□□□ 0.12
SRGAP3-210ENST00000491467 ABCC11Q96J66 1382 aa15.82■□□□□ 0.12
SRGAP3-210ENST00000491467 PMFBP1Q8TBY8 1022 aa15.81■□□□□ 0.12
SRGAP3-210ENST00000491467 STK26Q9P289 416 aa15.81■□□□□ 0.12
SRGAP3-210ENST00000491467 COL24A1Q17RW2 1714 aa15.8■□□□□ 0.12
SRGAP3-210ENST00000491467 NSD3Q9BZ95 1437 aa15.8■□□□□ 0.12
SRGAP3-210ENST00000491467 KIAA0232Q92628 1395 aa15.8■□□□□ 0.12
SRGAP3-210ENST00000491467 PPP4R2Q9NY27 417 aa15.8■□□□□ 0.12
SRGAP3-210ENST00000491467 POGKQ9P215 609 aa15.8■□□□□ 0.12
SRGAP3-210ENST00000491467 SSH2Q76I76 1423 aa15.79■□□□□ 0.12
SRGAP3-210ENST00000491467 LARP1Q6PKG0 1096 aaKnown RBP15.79■□□□□ 0.12
SRGAP3-210ENST00000491467 SLC12A5Q9H2X9 1139 aa15.79■□□□□ 0.12
SRGAP3-210ENST00000491467 AKAP12Q02952 1782 aa15.79■□□□□ 0.12
SRGAP3-210ENST00000491467 TERF2IPQ9NYB0 399 aa15.78■□□□□ 0.12
SRGAP3-210ENST00000491467 ADAMTS8Q9UP79 889 aa15.78■□□□□ 0.12
SRGAP3-210ENST00000491467 KIF20BQ96Q89 1820 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms