RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 HS3ST6Q96QI5 342 aa12.41□□□□□ -0.42
CMSS1-206ENST00000491299 SHPRHQ149N8 1683 aa12.41□□□□□ -0.42
CMSS1-206ENST00000491299 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
CMSS1-206ENST00000491299 ERBB3P21860 1342 aa12.39□□□□□ -0.43
CMSS1-206ENST00000491299 SPATA31A6Q5VVP1 1343 aa12.39□□□□□ -0.43
CMSS1-206ENST00000491299 SLC34A2O95436 690 aa12.39□□□□□ -0.43
CMSS1-206ENST00000491299 WAPLQ7Z5K2 1190 aa12.39□□□□□ -0.43
CMSS1-206ENST00000491299 PCDHGA4Q9Y5G9 962 aa12.39□□□□□ -0.43
CMSS1-206ENST00000491299 MEX3CQ5U5Q3 659 aaKnown RBP12.38□□□□□ -0.43
CMSS1-206ENST00000491299 LRRC59Q96AG4 307 aaKnown RBP12.38□□□□□ -0.43
CMSS1-206ENST00000491299 SIRT1Q96EB6 747 aa12.38□□□□□ -0.43
CMSS1-206ENST00000491299 POGKQ9P215 609 aa12.38□□□□□ -0.43
CMSS1-206ENST00000491299 PCDH10Q9P2E7 1040 aa12.38□□□□□ -0.43
CMSS1-206ENST00000491299 DLC1Q96QB1 1528 aa12.37□□□□□ -0.43
CMSS1-206ENST00000491299 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
CMSS1-206ENST00000491299 NUDT7P0C024 238 aa12.37□□□□□ -0.43
CMSS1-206ENST00000491299 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
CMSS1-206ENST00000491299 DDX27Q96GQ7 796 aaKnown RBP12.37□□□□□ -0.43
CMSS1-206ENST00000491299 FMN2Q9NZ56 1722 aa12.37□□□□□ -0.43
CMSS1-206ENST00000491299 PLEKHH1Q9ULM0 1364 aa12.36□□□□□ -0.43
CMSS1-206ENST00000491299 ESCO1Q5FWF5 840 aa12.36□□□□□ -0.43
CMSS1-206ENST00000491299 ADGRB1O14514 1584 aa12.35□□□□□ -0.43
CMSS1-206ENST00000491299 KIAA1210Q9ULL0 1709 aa12.35□□□□□ -0.43
CMSS1-206ENST00000491299 SAFB2Q14151 953 aaKnown RBP eCLIP12.35□□□□□ -0.43
CMSS1-206ENST00000491299 VARS2Q5ST30 1063 aaKnown RBP12.35□□□□□ -0.43
CMSS1-206ENST00000491299 PRAM1Q96QH2 718 aa12.35□□□□□ -0.43
CMSS1-206ENST00000491299 ORAI2Q96SN7 254 aa12.35□□□□□ -0.43
CMSS1-206ENST00000491299 TRAK1Q9UPV9 953 aa12.35□□□□□ -0.43
CMSS1-206ENST00000491299 KIF1AQ12756 1690 aa12.35□□□□□ -0.43
CMSS1-206ENST00000491299 NPHP3Q7Z494 1330 aa12.35□□□□□ -0.43
CMSS1-206ENST00000491299 NUTM2FA1L443 756 aa12.34□□□□□ -0.43
CMSS1-206ENST00000491299 UPF1Q92900 1129 aaKnown RBP eCLIP12.34□□□□□ -0.43
CMSS1-206ENST00000491299 NUTM2BA6NNL0 878 aaPredicted RBP12.33□□□□□ -0.44
CMSS1-206ENST00000491299 NUTM2EB1AL46 878 aaPredicted RBP12.33□□□□□ -0.44
CMSS1-206ENST00000491299 NUTM2AQ8IVF1 878 aaPredicted RBP12.33□□□□□ -0.44
CMSS1-206ENST00000491299 DDX17Q92841 729 aaKnown RBP12.33□□□□□ -0.44
CMSS1-206ENST00000491299 EIF3AQ14152 1382 aaKnown RBP12.32□□□□□ -0.44
CMSS1-206ENST00000491299 ARHGEF28Q8N1W1 1705 aaKnown RBP12.32□□□□□ -0.44
CMSS1-206ENST00000491299 PTCD2Q8WV60 388 aaKnown RBP12.32□□□□□ -0.44
CMSS1-206ENST00000491299 RGPD8O14715 1765 aaPredicted RBP12.32□□□□□ -0.44
CMSS1-206ENST00000491299 ADGRB2O60241 1585 aa12.31□□□□□ -0.44
CMSS1-206ENST00000491299 LRP6O75581 1613 aa12.31□□□□□ -0.44
CMSS1-206ENST00000491299 MFSD10Q14728 455 aa12.31□□□□□ -0.44
CMSS1-206ENST00000491299 SOS2Q07890 1332 aaPredicted RBP12.31□□□□□ -0.44
CMSS1-206ENST00000491299 PNPLA6Q8IY17 1366 aa12.3□□□□□ -0.44
CMSS1-206ENST00000491299 ZNF316A6NFI3 1004 aaPredicted RBP12.3□□□□□ -0.44
CMSS1-206ENST00000491299 FOXO3O43524 673 aa12.3□□□□□ -0.44
CMSS1-206ENST00000491299 NEUROD1Q13562 356 aa12.3□□□□□ -0.44
CMSS1-206ENST00000491299 ZNF772Q68DY9 489 aaPredicted RBP12.29□□□□□ -0.44
CMSS1-206ENST00000491299 MINK1Q8N4C8 1332 aaPredicted RBP12.29□□□□□ -0.44
CMSS1-206ENST00000491299 ANKARQ7Z5J8 1434 aa12.28□□□□□ -0.44
CMSS1-206ENST00000491299 TBC1D12O60347 775 aa12.28□□□□□ -0.44
CMSS1-206ENST00000491299 HIRIP3Q9BW71 556 aaPredicted RBP12.28□□□□□ -0.44
CMSS1-206ENST00000491299 PLSCR2Q9NRY7 297 aa12.28□□□□□ -0.44
CMSS1-206ENST00000491299 RGS17Q9UGC6 210 aaPredicted RBP12.28□□□□□ -0.44
CMSS1-206ENST00000491299 ITSN1Q15811 1721 aa12.28□□□□□ -0.44
CMSS1-206ENST00000491299 PXDNQ92626 1479 aa12.27□□□□□ -0.44
CMSS1-206ENST00000491299 COL22A1Q8NFW1 1626 aaPredicted RBP12.27□□□□□ -0.44
CMSS1-206ENST00000491299 XPCQ01831 940 aaPredicted RBP12.27□□□□□ -0.45
CMSS1-206ENST00000491299 PSME1Q06323 249 aa12.27□□□□□ -0.45
CMSS1-206ENST00000491299 L3MBTL2Q969R5 705 aa12.27□□□□□ -0.45
CMSS1-206ENST00000491299 SIN3AQ96ST3 1273 aa12.27□□□□□ -0.45
CMSS1-206ENST00000491299 LHX6Q9UPM6 363 aa12.27□□□□□ -0.45
CMSS1-206ENST00000491299 TULP4Q9NRJ4 1543 aa12.27□□□□□ -0.45
CMSS1-206ENST00000491299 OXER1Q8TDS5 423 aa12.26□□□□□ -0.45
CMSS1-206ENST00000491299 C8orf37Q96NL8 207 aa12.26□□□□□ -0.45
CMSS1-206ENST00000491299 WASLO00401 505 aaPredicted RBP12.25□□□□□ -0.45
CMSS1-206ENST00000491299 POTEAQ6S8J7 498 aa12.25□□□□□ -0.45
CMSS1-206ENST00000491299 USP32Q8NFA0 1604 aa12.25□□□□□ -0.45
CMSS1-206ENST00000491299 ADAMTS2O95450 1211 aa12.24□□□□□ -0.45
CMSS1-206ENST00000491299 AFF2P51816 1311 aa12.24□□□□□ -0.45
CMSS1-206ENST00000491299 KRT28Q7Z3Y7 464 aa12.24□□□□□ -0.45
CMSS1-206ENST00000491299 TRPM1Q7Z4N2 1603 aa12.24□□□□□ -0.45
CMSS1-206ENST00000491299 TONSLQ96HA7 1378 aa12.24□□□□□ -0.45
CMSS1-206ENST00000491299 MARF1Q9Y4F3 1742 aaKnown RBP12.23□□□□□ -0.45
CMSS1-206ENST00000491299 GPRASP1Q5JY77 1395 aa12.23□□□□□ -0.45
CMSS1-206ENST00000491299 HAP1P54257 671 aaPredicted RBP12.23□□□□□ -0.45
CMSS1-206ENST00000491299 NBPF1Q3BBV0 1214 aa12.23□□□□□ -0.45
CMSS1-206ENST00000491299 PMFBP1Q8TBY8 1022 aa12.23□□□□□ -0.45
CMSS1-206ENST00000491299 NGLY1Q96IV0 654 aa12.23□□□□□ -0.45
CMSS1-206ENST00000491299 QRICH2Q9H0J4 1663 aa12.22□□□□□ -0.45
CMSS1-206ENST00000491299 TNS3Q68CZ2 1445 aa12.22□□□□□ -0.45
CMSS1-206ENST00000491299 ROCK2O75116 1388 aaKnown RBP12.22□□□□□ -0.45
CMSS1-206ENST00000491299 SPATA31A3Q5VYP0 1347 aa12.22□□□□□ -0.45
CMSS1-206ENST00000491299 CENPJQ9HC77 1338 aaPredicted RBP12.22□□□□□ -0.45
CMSS1-206ENST00000491299 LMOD2Q6P5Q4 547 aa12.22□□□□□ -0.45
CMSS1-206ENST00000491299 CCER1Q8TC90 406 aaPredicted RBP12.22□□□□□ -0.45
CMSS1-206ENST00000491299 KRTAP3-3Q9BYR6 98 aa12.22□□□□□ -0.45
CMSS1-206ENST00000491299 KRTAP3-2Q9BYR7 98 aa12.22□□□□□ -0.45
CMSS1-206ENST00000491299 SBNO1A3KN83 1393 aa12.21□□□□□ -0.45
CMSS1-206ENST00000491299 ARHGEF10O15013 1369 aa12.21□□□□□ -0.45
CMSS1-206ENST00000491299 NGDNQ8NEJ9 315 aaKnown RBP12.21□□□□□ -0.45
CMSS1-206ENST00000491299 RXRBP28702 533 aa12.2□□□□□ -0.46
CMSS1-206ENST00000491299 ZNF687Q8N1G0 1237 aa12.2□□□□□ -0.46
CMSS1-206ENST00000491299 EMILIN3Q9NT22 766 aa12.2□□□□□ -0.46
CMSS1-206ENST00000491299 ATP7BP35670 1465 aa12.2□□□□□ -0.46
CMSS1-206ENST00000491299 SRPK2P78362 688 aaKnown RBP12.19□□□□□ -0.46
CMSS1-206ENST00000491299 NUDT16Q96DE0 195 aaKnown RBP12.19□□□□□ -0.46
CMSS1-206ENST00000491299 CDK19Q9BWU1 502 aa12.19□□□□□ -0.46
CMSS1-206ENST00000491299 USP21Q9UK80 565 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms