RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 TMEM106CQ9BVX2 250 aa10.71□□□□□ -0.69
CLDN1-202ENST00000490800 CDK19Q9BWU1 502 aa10.71□□□□□ -0.69
CLDN1-202ENST00000490800 KIF1AQ12756 1690 aa10.7□□□□□ -0.7
CLDN1-202ENST00000490800 GPRASP1Q5JY77 1395 aa10.7□□□□□ -0.7
CLDN1-202ENST00000490800 TRPC6Q9Y210 931 aa10.7□□□□□ -0.7
CLDN1-202ENST00000490800 SLIT2O94813 1529 aa10.69□□□□□ -0.7
CLDN1-202ENST00000490800 ARHGEF10O15013 1369 aa10.69□□□□□ -0.7
CLDN1-202ENST00000490800 ATAD2Q6PL18 1390 aa10.69□□□□□ -0.7
CLDN1-202ENST00000490800 CCDC9Q9Y3X0 531 aaKnown RBP10.69□□□□□ -0.7
CLDN1-202ENST00000490800 USP32Q8NFA0 1604 aa10.69□□□□□ -0.7
CLDN1-202ENST00000490800 EIF3AQ14152 1382 aaKnown RBP10.68□□□□□ -0.7
CLDN1-202ENST00000490800 GOLGA2Q08379 1002 aa10.68□□□□□ -0.7
CLDN1-202ENST00000490800 VPS72Q15906 364 aa10.68□□□□□ -0.7
CLDN1-202ENST00000490800 NLRP6P59044 892 aa10.67□□□□□ -0.7
CLDN1-202ENST00000490800 NBPF8Q3BBV2 869 aa10.67□□□□□ -0.7
CLDN1-202ENST00000490800 SEPT12Q8IYM1 358 aa10.67□□□□□ -0.7
CLDN1-202ENST00000490800 BTG4Q9NY30 223 aa10.67□□□□□ -0.7
CLDN1-202ENST00000490800 ADGRB2O60241 1585 aa10.67□□□□□ -0.7
CLDN1-202ENST00000490800 TULP4Q9NRJ4 1543 aa10.67□□□□□ -0.7
CLDN1-202ENST00000490800 RALGAPBQ86X10 1494 aa10.67□□□□□ -0.7
CLDN1-202ENST00000490800 ZNF316A6NFI3 1004 aaPredicted RBP10.66□□□□□ -0.7
CLDN1-202ENST00000490800 ONECUT3O60422 494 aaPredicted RBP10.66□□□□□ -0.7
CLDN1-202ENST00000490800 ACEP12821 1306 aa10.65□□□□□ -0.7
CLDN1-202ENST00000490800 MARF1Q9Y4F3 1742 aaKnown RBP10.65□□□□□ -0.7
CLDN1-202ENST00000490800 PLEKHG3A1L390 1219 aa10.65□□□□□ -0.7
CLDN1-202ENST00000490800 SOX12O15370 315 aa10.65□□□□□ -0.7
CLDN1-202ENST00000490800 NUTM2GQ5VZR2 741 aa10.65□□□□□ -0.7
CLDN1-202ENST00000490800 CCDC125Q86Z20 511 aa10.65□□□□□ -0.7
CLDN1-202ENST00000490800 SRPK2P78362 688 aaKnown RBP10.64□□□□□ -0.71
CLDN1-202ENST00000490800 FBXO22Q8NEZ5 403 aa10.64□□□□□ -0.71
CLDN1-202ENST00000490800 CENPJQ9HC77 1338 aaPredicted RBP10.63□□□□□ -0.71
CLDN1-202ENST00000490800 PPP1R37O75864 691 aa10.63□□□□□ -0.71
CLDN1-202ENST00000490800 GLI3P10071 1580 aa10.63□□□□□ -0.71
CLDN1-202ENST00000490800 ATP7BP35670 1465 aa10.62□□□□□ -0.71
CLDN1-202ENST00000490800 ARHGEF28Q8N1W1 1705 aaKnown RBP10.62□□□□□ -0.71
CLDN1-202ENST00000490800 A0A0G2JS52 829 aa10.62□□□□□ -0.71
CLDN1-202ENST00000490800 ZC3H6P61129 1189 aaKnown RBP10.62□□□□□ -0.71
CLDN1-202ENST00000490800 MYT1Q01538 1121 aa10.62□□□□□ -0.71
CLDN1-202ENST00000490800 NBR1Q14596 966 aa10.62□□□□□ -0.71
CLDN1-202ENST00000490800 CHRNA2Q15822 529 aa10.62□□□□□ -0.71
CLDN1-202ENST00000490800 FAM98CQ17RN3 349 aaKnown RBP10.62□□□□□ -0.71
CLDN1-202ENST00000490800 KRT27Q7Z3Y8 459 aa10.62□□□□□ -0.71
CLDN1-202ENST00000490800 PRDM11Q9NQV5 511 aa10.62□□□□□ -0.71
CLDN1-202ENST00000490800 TRPM3Q9HCF6 1732 aaPredicted RBP10.61□□□□□ -0.71
CLDN1-202ENST00000490800 GALR2O43603 387 aaPredicted RBP10.61□□□□□ -0.71
CLDN1-202ENST00000490800 ABTB2Q8N961 1025 aa10.61□□□□□ -0.71
CLDN1-202ENST00000490800 CABP1Q9NZU7 370 aa10.61□□□□□ -0.71
CLDN1-202ENST00000490800 POLR3AO14802 1390 aaPredicted RBP10.61□□□□□ -0.71
CLDN1-202ENST00000490800 EVX2Q03828 476 aa10.6□□□□□ -0.71
CLDN1-202ENST00000490800 MKRN3Q13064 507 aaKnown RBP10.6□□□□□ -0.71
CLDN1-202ENST00000490800 DEFB132Q7Z7B7 95 aa10.6□□□□□ -0.71
CLDN1-202ENST00000490800 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.6□□□□□ -0.71
CLDN1-202ENST00000490800 KIAA0232Q92628 1395 aa10.6□□□□□ -0.71
CLDN1-202ENST00000490800 ALS2Q96Q42 1657 aa10.6□□□□□ -0.71
CLDN1-202ENST00000490800 SPATA31A5Q5VU36 1347 aa10.59□□□□□ -0.71
CLDN1-202ENST00000490800 SPATA31A7Q8IWB4 1347 aa10.59□□□□□ -0.71
CLDN1-202ENST00000490800 EP400Q96L91 3159 aa10.59□□□□□ -0.71
CLDN1-202ENST00000490800 KIAA1210Q9ULL0 1709 aa10.59□□□□□ -0.71
CLDN1-202ENST00000490800 TTLL13PA6NNM8 815 aa10.59□□□□□ -0.71
CLDN1-202ENST00000490800 TIE1P35590 1138 aa10.59□□□□□ -0.71
CLDN1-202ENST00000490800 SF3B2Q13435 895 aaKnown RBP10.59□□□□□ -0.71
CLDN1-202ENST00000490800 STRN4Q9NRL3 753 aa10.59□□□□□ -0.71
CLDN1-202ENST00000490800 PPIP5K1Q6PFW1 1433 aa10.58□□□□□ -0.72
CLDN1-202ENST00000490800 EVA1CP58658 441 aa10.58□□□□□ -0.72
CLDN1-202ENST00000490800 FAM182BQ5T319 152 aa10.58□□□□□ -0.72
CLDN1-202ENST00000490800 NLRP13Q86W25 1043 aa10.58□□□□□ -0.72
CLDN1-202ENST00000490800 BMP2KQ9NSY1 1161 aaPredicted RBP10.58□□□□□ -0.72
CLDN1-202ENST00000490800 BLMP54132 1417 aaPredicted RBP10.58□□□□□ -0.72
CLDN1-202ENST00000490800 PLCH1Q4KWH8 1693 aa10.57□□□□□ -0.72
CLDN1-202ENST00000490800 USP35Q9P2H5 1018 aa10.57□□□□□ -0.72
CLDN1-202ENST00000490800 ABCA3Q99758 1704 aa10.57□□□□□ -0.72
CLDN1-202ENST00000490800 NWD2Q9ULI1 1742 aa10.57□□□□□ -0.72
CLDN1-202ENST00000490800 SPATA31A1Q5TZJ5 1347 aa10.57□□□□□ -0.72
CLDN1-202ENST00000490800 EVC2Q86UK5 1308 aa10.57□□□□□ -0.72
CLDN1-202ENST00000490800 ROCK2O75116 1388 aaKnown RBP10.56□□□□□ -0.72
CLDN1-202ENST00000490800 TRPM1Q7Z4N2 1603 aa10.56□□□□□ -0.72
CLDN1-202ENST00000490800 GCP02774 474 aa10.56□□□□□ -0.72
CLDN1-202ENST00000490800 HSPA5P11021 654 aaKnown RBP10.56□□□□□ -0.72
CLDN1-202ENST00000490800 MS4A4AQ96JQ5 239 aa10.56□□□□□ -0.72
CLDN1-202ENST00000490800 WDR70Q9NW82 654 aa10.56□□□□□ -0.72
CLDN1-202ENST00000490800 COL14A1Q05707 1796 aaKnown RBP10.56□□□□□ -0.72
CLDN1-202ENST00000490800 EIF4G2P78344 907 aaKnown RBP eCLIP10.55□□□□□ -0.72
CLDN1-202ENST00000490800 BRWD3Q6RI45 1802 aa10.55□□□□□ -0.72
CLDN1-202ENST00000490800 ITSN1Q15811 1721 aa10.55□□□□□ -0.72
CLDN1-202ENST00000490800 ZBTB7CA1YPR0 619 aa10.54□□□□□ -0.72
CLDN1-202ENST00000490800 LARP1Q6PKG0 1096 aaKnown RBP10.54□□□□□ -0.72
CLDN1-202ENST00000490800 USP19O94966 1318 aa10.54□□□□□ -0.72
CLDN1-202ENST00000490800 NRAPQ86VF7 1730 aa10.53□□□□□ -0.72
CLDN1-202ENST00000490800 BAG6P46379 1132 aa10.53□□□□□ -0.72
CLDN1-202ENST00000490800 CARD11Q9BXL7 1154 aa10.53□□□□□ -0.72
CLDN1-202ENST00000490800 TRIM35Q9UPQ4 493 aa10.53□□□□□ -0.72
CLDN1-202ENST00000490800 SRCAPQ6ZRS2 3230 aa10.53□□□□□ -0.72
CLDN1-202ENST00000490800 TOPAZ1Q8N9V7 1692 aa10.53□□□□□ -0.72
CLDN1-202ENST00000490800 CRYBG1Q9Y4K1 1723 aa10.53□□□□□ -0.72
CLDN1-202ENST00000490800 BRD4O60885 1362 aaPredicted RBP10.52□□□□□ -0.72
CLDN1-202ENST00000490800 USP47Q96K76 1375 aa10.52□□□□□ -0.72
CLDN1-202ENST00000490800 EN1Q05925 392 aaPredicted RBP10.52□□□□□ -0.73
CLDN1-202ENST00000490800 TTC21BQ7Z4L5 1316 aa10.52□□□□□ -0.73
CLDN1-202ENST00000490800 CPDO75976 1380 aa10.52□□□□□ -0.73
CLDN1-202ENST00000490800 USP6P35125 1406 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms