RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 ANO2Q9NQ90 1003 aa17.6■□□□□ 0.41
ARHGEF39-205ENST00000490638 PTMAP06454 111 aaKnown RBP17.6■□□□□ 0.41
ARHGEF39-205ENST00000490638 PDE3AQ14432 1141 aa17.6■□□□□ 0.41
ARHGEF39-205ENST00000490638 RBM19Q9Y4C8 960 aaKnown RBP17.6■□□□□ 0.41
ARHGEF39-205ENST00000490638 ANKRD36BQ8N2N9 1353 aa17.59■□□□□ 0.41
ARHGEF39-205ENST00000490638 YTHDC2Q9H6S0 1430 aaKnown RBP17.59■□□□□ 0.41
ARHGEF39-205ENST00000490638 TSHZ2Q9NRE2 1034 aa17.59■□□□□ 0.41
ARHGEF39-205ENST00000490638 MAPKBP1O60336 1514 aa17.59■□□□□ 0.41
ARHGEF39-205ENST00000490638 CCDC57Q2TAC2 916 aa17.59■□□□□ 0.41
ARHGEF39-205ENST00000490638 TMEM2Q9UHN6 1383 aa17.58■□□□□ 0.41
ARHGEF39-205ENST00000490638 TRDNQ13061 729 aa17.58■□□□□ 0.41
ARHGEF39-205ENST00000490638 KIF3AQ9Y496 699 aa17.58■□□□□ 0.41
ARHGEF39-205ENST00000490638 FAM161AQ3B820 660 aa17.58■□□□□ 0.4
ARHGEF39-205ENST00000490638 TRIM44Q96DX7 344 aaPredicted RBP17.58■□□□□ 0.4
ARHGEF39-205ENST00000490638 TESK2Q96S53 571 aa17.58■□□□□ 0.4
ARHGEF39-205ENST00000490638 SYNE3Q6ZMZ3 975 aa17.58■□□□□ 0.4
ARHGEF39-205ENST00000490638 CCDC85AQ96PX6 553 aaPredicted RBP17.58■□□□□ 0.4
ARHGEF39-205ENST00000490638 SIL1Q9H173 461 aa17.58■□□□□ 0.4
ARHGEF39-205ENST00000490638 DNMT1P26358 1616 aaKnown RBP17.58■□□□□ 0.4
ARHGEF39-205ENST00000490638 ZPR1O75312 459 aa17.57■□□□□ 0.4
ARHGEF39-205ENST00000490638 FOXD4L1Q9NU39 408 aa17.57■□□□□ 0.4
ARHGEF39-205ENST00000490638 CPLX2Q6PUV4 134 aaKnown RBP17.57■□□□□ 0.4
ARHGEF39-205ENST00000490638 FMNL2Q96PY5 1086 aa17.57■□□□□ 0.4
ARHGEF39-205ENST00000490638 MAGI3Q5TCQ9 1506 aa17.56■□□□□ 0.4
ARHGEF39-205ENST00000490638 ADGRL2O95490 1459 aa17.56■□□□□ 0.4
ARHGEF39-205ENST00000490638 PUS7Q96PZ0 661 aaKnown RBP17.56■□□□□ 0.4
ARHGEF39-205ENST00000490638 ZCRB1Q8TBF4 217 aaKnown RBP17.56■□□□□ 0.4
ARHGEF39-205ENST00000490638 SLAIN2Q9P270 581 aa17.56■□□□□ 0.4
ARHGEF39-205ENST00000490638 ZNF652Q9Y2D9 606 aa17.56■□□□□ 0.4
ARHGEF39-205ENST00000490638 ERCC6L2Q5T890 1561 aa17.56■□□□□ 0.4
ARHGEF39-205ENST00000490638 AKAP17AQ02040 695 aaKnown RBP17.56■□□□□ 0.4
ARHGEF39-205ENST00000490638 PZPP20742 1482 aa17.56■□□□□ 0.4
ARHGEF39-205ENST00000490638 AMER1Q5JTC6 1135 aaPredicted RBP17.55■□□□□ 0.4
ARHGEF39-205ENST00000490638 HTATSF1O43719 755 aaKnown RBP17.55■□□□□ 0.4
ARHGEF39-205ENST00000490638 SLFN5Q08AF3 891 aa17.55■□□□□ 0.4
ARHGEF39-205ENST00000490638 DDB1Q16531 1140 aa17.55■□□□□ 0.4
ARHGEF39-205ENST00000490638 IFT57Q9NWB7 429 aa17.55■□□□□ 0.4
ARHGEF39-205ENST00000490638 RALGAPBQ86X10 1494 aa17.55■□□□□ 0.4
ARHGEF39-205ENST00000490638 TBC1D2BQ9UPU7 963 aa17.54■□□□□ 0.4
ARHGEF39-205ENST00000490638 PDE4AP27815 886 aa17.54■□□□□ 0.4
ARHGEF39-205ENST00000490638 RNF20Q5VTR2 975 aa17.54■□□□□ 0.4
ARHGEF39-205ENST00000490638 NPATQ14207 1427 aa17.54■□□□□ 0.4
ARHGEF39-205ENST00000490638 SRGAP3O43295 1099 aa17.54■□□□□ 0.4
ARHGEF39-205ENST00000490638 MBD5Q9P267 1494 aa17.54■□□□□ 0.4
ARHGEF39-205ENST00000490638 CLSTN1O94985 981 aa17.53■□□□□ 0.4
ARHGEF39-205ENST00000490638 FSD1Q9BTV5 496 aa17.53■□□□□ 0.4
ARHGEF39-205ENST00000490638 ABCC11Q96J66 1382 aa17.53■□□□□ 0.4
ARHGEF39-205ENST00000490638 MARCH6O60337 910 aa17.53■□□□□ 0.4
ARHGEF39-205ENST00000490638 LARP1Q6PKG0 1096 aaKnown RBP17.53■□□□□ 0.4
ARHGEF39-205ENST00000490638 BCL11BQ9C0K0 894 aaPredicted RBP17.53■□□□□ 0.4
ARHGEF39-205ENST00000490638 POLKQ9UBT6 870 aa17.53■□□□□ 0.4
ARHGEF39-205ENST00000490638 CEP126Q9P2H0 1117 aa17.53■□□□□ 0.4
ARHGEF39-205ENST00000490638 TSPOAP1O95153 1857 aa17.53■□□□□ 0.4
ARHGEF39-205ENST00000490638 FAM83GA6ND36 823 aa17.53■□□□□ 0.4
ARHGEF39-205ENST00000490638 ERC1Q8IUD2 1116 aa17.53■□□□□ 0.4
ARHGEF39-205ENST00000490638 DNAJC2Q99543 621 aaKnown RBP17.53■□□□□ 0.4
ARHGEF39-205ENST00000490638 VPS53Q5VIR6 699 aa17.52■□□□□ 0.4
ARHGEF39-205ENST00000490638 DHX16O60231 1041 aaKnown RBP17.52■□□□□ 0.4
ARHGEF39-205ENST00000490638 RASSF8Q8NHQ8 419 aa17.52■□□□□ 0.4
ARHGEF39-205ENST00000490638 GBP4Q96PP9 640 aa17.52■□□□□ 0.4
ARHGEF39-205ENST00000490638 GNL3LQ9NVN8 582 aaKnown RBP17.51■□□□□ 0.39
ARHGEF39-205ENST00000490638 FAM184AQ8NB25 1140 aa17.51■□□□□ 0.39
ARHGEF39-205ENST00000490638 DBF4Q9UBU7 674 aaPredicted RBP17.51■□□□□ 0.39
ARHGEF39-205ENST00000490638 ACSBG1Q96GR2 724 aa17.51■□□□□ 0.39
ARHGEF39-205ENST00000490638 CTDP1Q9Y5B0 961 aaPredicted RBP17.51■□□□□ 0.39
ARHGEF39-205ENST00000490638 CCDC158Q5M9N0 1113 aa17.51■□□□□ 0.39
ARHGEF39-205ENST00000490638 INTS3Q68E01 1043 aaKnown RBP17.5■□□□□ 0.39
ARHGEF39-205ENST00000490638 AEBP1Q8IUX7 1158 aa17.5■□□□□ 0.39
ARHGEF39-205ENST00000490638 SSH1Q8WYL5 1049 aa17.5■□□□□ 0.39
ARHGEF39-205ENST00000490638 CHMP4CQ96CF2 233 aa17.5■□□□□ 0.39
ARHGEF39-205ENST00000490638 EIF4A2Q14240 407 aaKnown RBP17.5■□□□□ 0.39
ARHGEF39-205ENST00000490638 BTG4Q9NY30 223 aa17.5■□□□□ 0.39
ARHGEF39-205ENST00000490638 SAMD1Q6SPF0 538 aaPredicted RBP17.49■□□□□ 0.39
ARHGEF39-205ENST00000490638 CPLX1O14810 134 aa17.49■□□□□ 0.39
ARHGEF39-205ENST00000490638 RALYLQ86SE5 291 aaKnown RBP17.49■□□□□ 0.39
ARHGEF39-205ENST00000490638 TEX13AQ9BXU3 409 aaPredicted RBP17.49■□□□□ 0.39
ARHGEF39-205ENST00000490638 ZBTB3Q9H5J0 574 aa17.49■□□□□ 0.39
ARHGEF39-205ENST00000490638 IL2RBP14784 551 aa17.49■□□□□ 0.39
ARHGEF39-205ENST00000490638 MAGI2Q86UL8 1455 aa17.48■□□□□ 0.39
ARHGEF39-205ENST00000490638 MVPQ14764 893 aaKnown RBP17.48■□□□□ 0.39
ARHGEF39-205ENST00000490638 TRPM2O94759 1503 aa17.48■□□□□ 0.39
ARHGEF39-205ENST00000490638 AK7Q96M32 723 aa17.48■□□□□ 0.39
ARHGEF39-205ENST00000490638 CARD14Q9BXL6 1004 aa17.48■□□□□ 0.39
ARHGEF39-205ENST00000490638 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
ARHGEF39-205ENST00000490638 CNTROBQ8N137 903 aa17.48■□□□□ 0.39
ARHGEF39-205ENST00000490638 DDX17Q92841 729 aaKnown RBP17.48■□□□□ 0.39
ARHGEF39-205ENST00000490638 CCDC34Q96HJ3 373 aa17.48■□□□□ 0.39
ARHGEF39-205ENST00000490638 MAP3K19Q56UN5 1328 aa17.48■□□□□ 0.39
ARHGEF39-205ENST00000490638 MYD88Q99836 296 aa17.47■□□□□ 0.39
ARHGEF39-205ENST00000490638 MLH3Q9UHC1 1453 aa17.47■□□□□ 0.39
ARHGEF39-205ENST00000490638 FLT4P35916 1363 aa17.47■□□□□ 0.39
ARHGEF39-205ENST00000490638 GPTP24298 496 aa17.47■□□□□ 0.39
ARHGEF39-205ENST00000490638 IGHMBP2P38935 993 aaKnown RBP17.47■□□□□ 0.39
ARHGEF39-205ENST00000490638 FOXD4L5Q5VV16 416 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF39-205ENST00000490638 FOXD4L4Q8WXT5 416 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF39-205ENST00000490638 H3BQV1 296 aa17.47■□□□□ 0.39
ARHGEF39-205ENST00000490638 IFFO2Q5TF58 517 aa17.47■□□□□ 0.39
ARHGEF39-205ENST00000490638 ERICH2A1L162 156 aa17.46■□□□□ 0.39
ARHGEF39-205ENST00000490638 F6X3S4 739 aa17.46■□□□□ 0.39
ARHGEF39-205ENST00000490638 GCC1Q96CN9 775 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms