RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 CCNYL3P0C7X3 344 aa10.61□□□□□ -0.71
TM9SF3-206ENST00000490192 TBC1D9Q6ZT07 1266 aa10.61□□□□□ -0.71
TM9SF3-206ENST00000490192 LOC105371045A0A1W2PR82 267 aa10.6□□□□□ -0.71
TM9SF3-206ENST00000490192 TTC24A2A3L6 582 aaPredicted RBP10.6□□□□□ -0.71
TM9SF3-206ENST00000490192 NR6A1Q15406 480 aa10.6□□□□□ -0.71
TM9SF3-206ENST00000490192 PTPRNQ16849 979 aa10.6□□□□□ -0.71
TM9SF3-206ENST00000490192 DESI1Q6ICB0 168 aa10.6□□□□□ -0.71
TM9SF3-206ENST00000490192 WNT7AO00755 349 aa10.59□□□□□ -0.71
TM9SF3-206ENST00000490192 WNT7BP56706 349 aa10.58□□□□□ -0.72
TM9SF3-206ENST00000490192 ATP9BO43861 1147 aa10.57□□□□□ -0.72
TM9SF3-206ENST00000490192 EVA1BQ9NVM1 165 aa10.57□□□□□ -0.72
TM9SF3-206ENST00000490192 PNMA1Q8ND90 353 aa10.56□□□□□ -0.72
TM9SF3-206ENST00000490192 GNEQ9Y223 722 aaKnown RBP10.56□□□□□ -0.72
TM9SF3-206ENST00000490192 CTHP32929 405 aa10.55□□□□□ -0.72
TM9SF3-206ENST00000490192 EIF4G2P78344 907 aaKnown RBP eCLIP10.55□□□□□ -0.72
TM9SF3-206ENST00000490192 KCNH2Q12809 1159 aa10.55□□□□□ -0.72
TM9SF3-206ENST00000490192 RC3H1Q5TC82 1133 aaKnown RBP10.55□□□□□ -0.72
TM9SF3-206ENST00000490192 PTCRAQ6ISU1 281 aaPredicted RBP10.55□□□□□ -0.72
TM9SF3-206ENST00000490192 B4GALNT3Q6L9W6 998 aa10.55□□□□□ -0.72
TM9SF3-206ENST00000490192 SNIP1Q8TAD8 396 aaKnown RBP10.55□□□□□ -0.72
TM9SF3-206ENST00000490192 TOR4AQ9NXH8 423 aa10.55□□□□□ -0.72
TM9SF3-206ENST00000490192 PER1O15534 1290 aaPredicted RBP10.54□□□□□ -0.72
TM9SF3-206ENST00000490192 MYT1Q01538 1121 aa10.54□□□□□ -0.72
TM9SF3-206ENST00000490192 MRGPRX2Q96LB1 330 aa10.54□□□□□ -0.72
TM9SF3-206ENST00000490192 KANK4Q5T7N3 995 aaPredicted RBP10.53□□□□□ -0.72
TM9SF3-206ENST00000490192 LYPD8Q6UX82 237 aa10.53□□□□□ -0.72
TM9SF3-206ENST00000490192 LCE2BO14633 110 aa10.52□□□□□ -0.73
TM9SF3-206ENST00000490192 EHBP1Q8NDI1 1231 aa10.52□□□□□ -0.73
TM9SF3-206ENST00000490192 UNC93B1Q9H1C4 597 aa10.52□□□□□ -0.73
TM9SF3-206ENST00000490192 ELOAQ14241 798 aaKnown RBP10.51□□□□□ -0.73
TM9SF3-206ENST00000490192 TMEM164Q5U3C3 297 aa10.51□□□□□ -0.73
TM9SF3-206ENST00000490192 ZMIZ1Q9ULJ6 1067 aa10.51□□□□□ -0.73
TM9SF3-206ENST00000490192 SKOR1P84550 965 aa10.5□□□□□ -0.73
TM9SF3-206ENST00000490192 NR1H3Q13133 447 aa10.5□□□□□ -0.73
TM9SF3-206ENST00000490192 ZNF787Q6DD87 383 aa10.5□□□□□ -0.73
TM9SF3-206ENST00000490192 STK32AQ8WU08 396 aa10.5□□□□□ -0.73
TM9SF3-206ENST00000490192 PIK3CDO00329 1044 aa10.49□□□□□ -0.73
TM9SF3-206ENST00000490192 CCER1Q8TC90 406 aaPredicted RBP10.49□□□□□ -0.73
TM9SF3-206ENST00000490192 BAP1Q92560 729 aa10.49□□□□□ -0.73
TM9SF3-206ENST00000490192 LINC01559Q495D7 138 aa10.48□□□□□ -0.73
TM9SF3-206ENST00000490192 AXIN1O15169 862 aa10.47□□□□□ -0.73
TM9SF3-206ENST00000490192 FBXO45P0C2W1 286 aa10.47□□□□□ -0.73
TM9SF3-206ENST00000490192 SH3BP2P78314 561 aa10.47□□□□□ -0.73
TM9SF3-206ENST00000490192 CTC1Q2NKJ3 1217 aa10.47□□□□□ -0.73
TM9SF3-206ENST00000490192 TXNDC2Q86VQ3 553 aa10.47□□□□□ -0.73
TM9SF3-206ENST00000490192 NOVA2Q9UNW9 492 aaKnown RBP10.47□□□□□ -0.73
TM9SF3-206ENST00000490192 SHROOM4Q9ULL8 1493 aa10.47□□□□□ -0.73
TM9SF3-206ENST00000490192 UNCXA6NJT0 531 aa10.46□□□□□ -0.73
TM9SF3-206ENST00000490192 ALDH1A1P00352 501 aa10.46□□□□□ -0.73
TM9SF3-206ENST00000490192 USP17L3A6NCW0 530 aa10.45□□□□□ -0.74
TM9SF3-206ENST00000490192 USP17L4A6NCW7 530 aa10.45□□□□□ -0.74
TM9SF3-206ENST00000490192 J3QL48 77 aa10.45□□□□□ -0.74
TM9SF3-206ENST00000490192 AVPP01185 164 aa10.45□□□□□ -0.74
TM9SF3-206ENST00000490192 SMPD1P17405 629 aa10.45□□□□□ -0.74
TM9SF3-206ENST00000490192 PHLDB3Q6NSJ2 640 aa10.45□□□□□ -0.74
TM9SF3-206ENST00000490192 USP17L2Q6R6M4 530 aa10.45□□□□□ -0.74
TM9SF3-206ENST00000490192 USP17L1Q7RTZ2 530 aa10.45□□□□□ -0.74
TM9SF3-206ENST00000490192 NFATC2IPQ8NCF5 419 aa10.45□□□□□ -0.74
TM9SF3-206ENST00000490192 AAASQ9NRG9 546 aa10.45□□□□□ -0.74
TM9SF3-206ENST00000490192 SKIP12755 728 aa10.44□□□□□ -0.74
TM9SF3-206ENST00000490192 ZNF511Q8NB15 262 aa10.44□□□□□ -0.74
TM9SF3-206ENST00000490192 WASF2Q9Y6W5 498 aa10.44□□□□□ -0.74
TM9SF3-206ENST00000490192 ZBBXA8MT70 800 aa10.43□□□□□ -0.74
TM9SF3-206ENST00000490192 ST8SIA5O15466 376 aa10.43□□□□□ -0.74
TM9SF3-206ENST00000490192 VARSP26640 1264 aaKnown RBP10.43□□□□□ -0.74
TM9SF3-206ENST00000490192 CRIPAKQ8N1N5 446 aa10.43□□□□□ -0.74
TM9SF3-206ENST00000490192 ARMC2Q8NEN0 867 aa10.43□□□□□ -0.74
TM9SF3-206ENST00000490192 MAP10Q9P2G4 905 aa10.43□□□□□ -0.74
TM9SF3-206ENST00000490192 RBM47A0AV96 593 aaKnown RBP10.42□□□□□ -0.74
TM9SF3-206ENST00000490192 USP17L5A8MUK1 530 aa10.42□□□□□ -0.74
TM9SF3-206ENST00000490192 AGERQ15109 404 aa10.42□□□□□ -0.74
TM9SF3-206ENST00000490192 DEPDC4Q8N2C3 294 aa10.42□□□□□ -0.74
TM9SF3-206ENST00000490192 F12P00748 615 aaPredicted RBP10.41□□□□□ -0.74
TM9SF3-206ENST00000490192 PLEKHM2Q8IWE5 1019 aa10.41□□□□□ -0.74
TM9SF3-206ENST00000490192 FAM196BA6NMK8 535 aa10.4□□□□□ -0.74
TM9SF3-206ENST00000490192 SIAH2O43255 324 aa10.4□□□□□ -0.74
TM9SF3-206ENST00000490192 SSFA2P28290 1259 aa10.4□□□□□ -0.74
TM9SF3-206ENST00000490192 ARID4AP29374 1257 aaPredicted RBP10.4□□□□□ -0.74
TM9SF3-206ENST00000490192 SMCPP49901 116 aaPredicted RBP10.4□□□□□ -0.74
TM9SF3-206ENST00000490192 USP17L15C9J2P7 530 aa10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 USP17L10C9JJH3 530 aa10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 USP17L13C9JLJ4 530 aa10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 USP17L12C9JPN9 530 aa10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 USP17L11C9JVI0 530 aa10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 USP17L21D6R901 530 aa10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 USP17L18D6R9N7 530 aa10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 USP17L22D6RA61 530 aa10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 USP17L17D6RBQ6 530 aa10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 USP17L19D6RCP7 530 aa10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 USP17L20D6RJB6 530 aa10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 USP17L24Q0WX57 530 aa10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 CRTC2Q53ET0 693 aaPredicted RBP10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 FAM174AQ8TBP5 190 aa10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 MKRN1Q9UHC7 482 aaKnown RBP10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 FKBPLQ9UIM3 349 aa10.39□□□□□ -0.75
TM9SF3-206ENST00000490192 BPHLQ86WA6 291 aaPredicted RBP10.38□□□□□ -0.75
TM9SF3-206ENST00000490192 HPS1Q92902 700 aa10.38□□□□□ -0.75
TM9SF3-206ENST00000490192 SLAIN2Q9P270 581 aa10.38□□□□□ -0.75
TM9SF3-206ENST00000490192 NBPF14Q5TI25 921 aa10.37□□□□□ -0.75
TM9SF3-206ENST00000490192 LARP1Q6PKG0 1096 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms