RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 COL13A1Q5TAT6 717 aaPredicted RBP6.44□□□□□ -1.38
RTN1-207ENST00000490111 PXDNQ92626 1479 aa6.44□□□□□ -1.38
RTN1-207ENST00000490111 NWD2Q9ULI1 1742 aa6.44□□□□□ -1.38
RTN1-207ENST00000490111 USP32Q8NFA0 1604 aa6.43□□□□□ -1.38
RTN1-207ENST00000490111 ERBINQ96RT1 1412 aa6.43□□□□□ -1.38
RTN1-207ENST00000490111 SPDYE2BA6NHP3 402 aa6.43□□□□□ -1.38
RTN1-207ENST00000490111 SPDYE6P0CI01 402 aa6.43□□□□□ -1.38
RTN1-207ENST00000490111 XPCQ01831 940 aaPredicted RBP6.43□□□□□ -1.38
RTN1-207ENST00000490111 KCNA1Q09470 495 aa6.43□□□□□ -1.38
RTN1-207ENST00000490111 SPDYE2Q495Y8 402 aa6.43□□□□□ -1.38
RTN1-207ENST00000490111 KANK4Q5T7N3 995 aaPredicted RBP6.43□□□□□ -1.38
RTN1-207ENST00000490111 FAM196AQ6ZSG2 479 aa6.43□□□□□ -1.38
RTN1-207ENST00000490111 POM121Q96HA1 1249 aa6.43□□□□□ -1.38
RTN1-207ENST00000490111 FHDC1Q9C0D6 1143 aaPredicted RBP6.43□□□□□ -1.38
RTN1-207ENST00000490111 IGSF5Q9NSI5 407 aa6.43□□□□□ -1.38
RTN1-207ENST00000490111 MYOM1P52179 1685 aa6.42□□□□□ -1.38
RTN1-207ENST00000490111 PLCH1Q4KWH8 1693 aa6.42□□□□□ -1.38
RTN1-207ENST00000490111 FOXO3O43524 673 aa6.42□□□□□ -1.38
RTN1-207ENST00000490111 PTGER2P43116 358 aa6.42□□□□□ -1.38
RTN1-207ENST00000490111 ESCO1Q5FWF5 840 aa6.42□□□□□ -1.38
RTN1-207ENST00000490111 TNS4Q8IZW8 715 aa6.42□□□□□ -1.38
RTN1-207ENST00000490111 FAM212AQ96EL1 285 aa6.42□□□□□ -1.38
RTN1-207ENST00000490111 METP08581 1390 aa6.42□□□□□ -1.38
RTN1-207ENST00000490111 KIF15Q9NS87 1388 aa6.42□□□□□ -1.38
RTN1-207ENST00000490111 SHANK3Q9BYB0 1731 aa6.42□□□□□ -1.38
RTN1-207ENST00000490111 ADGRL2O95490 1459 aa6.41□□□□□ -1.38
RTN1-207ENST00000490111 MLLT3P42568 568 aaPredicted RBP6.41□□□□□ -1.38
RTN1-207ENST00000490111 PARP9Q8IXQ6 854 aa6.41□□□□□ -1.38
RTN1-207ENST00000490111 RRP7BPQ9NSQ0 103 aa6.41□□□□□ -1.38
RTN1-207ENST00000490111 LRPPRCP42704 1394 aaKnown RBP6.41□□□□□ -1.38
RTN1-207ENST00000490111 DLC1Q96QB1 1528 aa6.4□□□□□ -1.38
RTN1-207ENST00000490111 CASZ1Q86V15 1759 aa6.4□□□□□ -1.38
RTN1-207ENST00000490111 GPR37O15354 613 aa6.4□□□□□ -1.38
RTN1-207ENST00000490111 ZBTB7AO95365 584 aa6.4□□□□□ -1.38
RTN1-207ENST00000490111 PDE4CQ08493 712 aa6.4□□□□□ -1.38
RTN1-207ENST00000490111 GPR162Q16538 588 aa6.4□□□□□ -1.38
RTN1-207ENST00000490111 AMHR2Q16671 573 aa6.4□□□□□ -1.38
RTN1-207ENST00000490111 SPATA31A3Q5VYP0 1347 aa6.4□□□□□ -1.39
RTN1-207ENST00000490111 NRXN3Q9Y4C0 1643 aa6.39□□□□□ -1.39
RTN1-207ENST00000490111 UNCXA6NJT0 531 aa6.39□□□□□ -1.39
RTN1-207ENST00000490111 CABLES1Q8TDN4 633 aa6.39□□□□□ -1.39
RTN1-207ENST00000490111 PCMTD1Q96MG8 357 aaPredicted RBP6.39□□□□□ -1.39
RTN1-207ENST00000490111 MFRPQ9BY79 579 aa6.39□□□□□ -1.39
RTN1-207ENST00000490111 PDGFDQ9GZP0 370 aaPredicted RBP6.39□□□□□ -1.39
RTN1-207ENST00000490111 SPINK5Q9NQ38 1064 aaPredicted RBP6.39□□□□□ -1.39
RTN1-207ENST00000490111 THSD7AQ9UPZ6 1657 aa6.39□□□□□ -1.39
RTN1-207ENST00000490111 CEP350Q5VT06 3117 aa6.39□□□□□ -1.39
RTN1-207ENST00000490111 BRD1O95696 1058 aa6.38□□□□□ -1.39
RTN1-207ENST00000490111 CCDC27Q2M243 656 aa6.38□□□□□ -1.39
RTN1-207ENST00000490111 DNAJC5GQ8N7S2 189 aa6.38□□□□□ -1.39
RTN1-207ENST00000490111 UBE2Q2Q8WVN8 375 aa6.38□□□□□ -1.39
RTN1-207ENST00000490111 POLR3GLQ9BT43 218 aa6.38□□□□□ -1.39
RTN1-207ENST00000490111 BTG4Q9NY30 223 aa6.38□□□□□ -1.39
RTN1-207ENST00000490111 SPATA31A5Q5VU36 1347 aa6.38□□□□□ -1.39
RTN1-207ENST00000490111 SPATA31A7Q8IWB4 1347 aa6.38□□□□□ -1.39
RTN1-207ENST00000490111 NRAPQ86VF7 1730 aa6.37□□□□□ -1.39
RTN1-207ENST00000490111 NEXMIFQ5QGS0 1516 aa6.37□□□□□ -1.39
RTN1-207ENST00000490111 PPP1R37O75864 691 aa6.37□□□□□ -1.39
RTN1-207ENST00000490111 APLP1P51693 650 aa6.37□□□□□ -1.39
RTN1-207ENST00000490111 MFSD10Q14728 455 aa6.37□□□□□ -1.39
RTN1-207ENST00000490111 KRT28Q7Z3Y7 464 aa6.36□□□□□ -1.39
RTN1-207ENST00000490111 CCDC102AQ96A19 550 aa6.36□□□□□ -1.39
RTN1-207ENST00000490111 CHIC2Q9UKJ5 165 aa6.36□□□□□ -1.39
RTN1-207ENST00000490111 MYOM3Q5VTT5 1437 aa6.35□□□□□ -1.39
RTN1-207ENST00000490111 ATP10DQ9P241 1426 aa6.35□□□□□ -1.39
RTN1-207ENST00000490111 MAP3K5Q99683 1374 aa6.35□□□□□ -1.39
RTN1-207ENST00000490111 ROBO2Q9HCK4 1378 aa6.35□□□□□ -1.39
RTN1-207ENST00000490111 MINK1Q8N4C8 1332 aaPredicted RBP6.35□□□□□ -1.39
RTN1-207ENST00000490111 PPM1GO15355 546 aaPredicted RBP6.35□□□□□ -1.39
RTN1-207ENST00000490111 PDE3BQ13370 1112 aa6.35□□□□□ -1.39
RTN1-207ENST00000490111 CAMK2BQ13554 666 aa6.35□□□□□ -1.39
RTN1-207ENST00000490111 MTFR1LQ9H019 292 aa6.35□□□□□ -1.39
RTN1-207ENST00000490111 ANO8Q9HCE9 1232 aaPredicted RBP6.35□□□□□ -1.39
RTN1-207ENST00000490111 CROCC2H7BZ55 1655 aa6.35□□□□□ -1.39
RTN1-207ENST00000490111 VPS8Q8N3P4 1428 aa6.34□□□□□ -1.39
RTN1-207ENST00000490111 CANXP27824 592 aaKnown RBP6.34□□□□□ -1.39
RTN1-207ENST00000490111 SND1Q7KZF4 910 aaKnown RBP eCLIP6.34□□□□□ -1.39
RTN1-207ENST00000490111 COG6Q9Y2V7 657 aa6.34□□□□□ -1.39
RTN1-207ENST00000490111 CCDC144AA2RUR9 1427 aa6.33□□□□□ -1.4
RTN1-207ENST00000490111 ABCC5O15440 1437 aa6.33□□□□□ -1.4
RTN1-207ENST00000490111 ABCA3Q99758 1704 aa6.33□□□□□ -1.4
RTN1-207ENST00000490111 IQGAP3Q86VI3 1631 aa6.33□□□□□ -1.4
RTN1-207ENST00000490111 ACIN1Q9UKV3 1341 aaKnown RBP6.33□□□□□ -1.4
RTN1-207ENST00000490111 CDC42BPGQ6DT37 1551 aa6.33□□□□□ -1.4
RTN1-207ENST00000490111 NUTM2FA1L443 756 aa6.33□□□□□ -1.4
RTN1-207ENST00000490111 PLSCR1O15162 318 aa6.33□□□□□ -1.4
RTN1-207ENST00000490111 PSME1Q06323 249 aa6.33□□□□□ -1.4
RTN1-207ENST00000490111 MAP2K5Q13163 448 aa6.33□□□□□ -1.4
RTN1-207ENST00000490111 WWC3Q9ULE0 1092 aa6.33□□□□□ -1.4
RTN1-207ENST00000490111 USTQ9Y2C2 406 aa6.33□□□□□ -1.4
RTN1-207ENST00000490111 COL14A1Q05707 1796 aaKnown RBP6.33□□□□□ -1.4
RTN1-207ENST00000490111 HFM1A2PYH4 1435 aa6.33□□□□□ -1.4
RTN1-207ENST00000490111 TNS3Q68CZ2 1445 aa6.33□□□□□ -1.4
RTN1-207ENST00000490111 SPATA31A1Q5TZJ5 1347 aa6.32□□□□□ -1.4
RTN1-207ENST00000490111 RGPD3A6NKT7 1758 aaPredicted RBP6.32□□□□□ -1.4
RTN1-207ENST00000490111 RGPD4Q7Z3J3 1758 aa6.32□□□□□ -1.4
RTN1-207ENST00000490111 GRIN3BO60391 1043 aa6.32□□□□□ -1.4
RTN1-207ENST00000490111 PYGBP11216 843 aa6.32□□□□□ -1.4
RTN1-207ENST00000490111 SH3D19Q5HYK7 790 aa6.32□□□□□ -1.4
RTN1-207ENST00000490111 JMYQ8N9B5 988 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms