RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 YTHDC2Q9H6S0 1430 aaKnown RBP12.55□□□□□ -0.4
RAB3GAP1-205ENST00000489858 DLC1Q96QB1 1528 aa12.55□□□□□ -0.4
RAB3GAP1-205ENST00000489858 ATAD2Q6PL18 1390 aa12.55□□□□□ -0.4
RAB3GAP1-205ENST00000489858 NUTM2DQ5VT03 806 aaPredicted RBP12.54□□□□□ -0.4
RAB3GAP1-205ENST00000489858 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.54□□□□□ -0.4
RAB3GAP1-205ENST00000489858 CFAP53Q96M91 514 aa12.54□□□□□ -0.4
RAB3GAP1-205ENST00000489858 SLC12A5Q9H2X9 1139 aa12.54□□□□□ -0.4
RAB3GAP1-205ENST00000489858 SETD1AO15047 1707 aaKnown RBP12.54□□□□□ -0.4
RAB3GAP1-205ENST00000489858 NKTRP30414 1462 aaKnown RBP12.53□□□□□ -0.4
RAB3GAP1-205ENST00000489858 C2orf72A6NCS6 295 aa12.53□□□□□ -0.4
RAB3GAP1-205ENST00000489858 DUSP27Q5VZP5 1158 aa12.53□□□□□ -0.4
RAB3GAP1-205ENST00000489858 CCDC146Q8IYE0 955 aa12.53□□□□□ -0.4
RAB3GAP1-205ENST00000489858 ANP32EQ9BTT0 268 aa12.53□□□□□ -0.4
RAB3GAP1-205ENST00000489858 A2ML1A8K2U0 1454 aa12.53□□□□□ -0.4
RAB3GAP1-205ENST00000489858 IQSEC2Q5JU85 1478 aa12.53□□□□□ -0.4
RAB3GAP1-205ENST00000489858 SLFN5Q08AF3 891 aa12.52□□□□□ -0.41
RAB3GAP1-205ENST00000489858 KIF20BQ96Q89 1820 aa12.52□□□□□ -0.41
RAB3GAP1-205ENST00000489858 ABCC11Q96J66 1382 aa12.52□□□□□ -0.41
RAB3GAP1-205ENST00000489858 RIMS2Q9UQ26 1411 aa12.52□□□□□ -0.41
RAB3GAP1-205ENST00000489858 E9PSI1 815 aa12.51□□□□□ -0.41
RAB3GAP1-205ENST00000489858 KHSRPQ92945 711 aaKnown RBP eCLIP12.51□□□□□ -0.417e-8■■■□□ 15.5
RAB3GAP1-205ENST00000489858 RNF166Q96A37 237 aaPredicted RBP12.51□□□□□ -0.41
RAB3GAP1-205ENST00000489858 MED14O60244 1454 aa12.51□□□□□ -0.41
RAB3GAP1-205ENST00000489858 APAF1O14727 1248 aa12.5□□□□□ -0.41
RAB3GAP1-205ENST00000489858 CRBNQ96SW2 442 aa12.5□□□□□ -0.41
RAB3GAP1-205ENST00000489858 STK26Q9P289 416 aa12.5□□□□□ -0.41
RAB3GAP1-205ENST00000489858 KNDC1Q76NI1 1749 aa12.5□□□□□ -0.41
RAB3GAP1-205ENST00000489858 ADGRB2O60241 1585 aa12.49□□□□□ -0.41
RAB3GAP1-205ENST00000489858 A0A1W2PP64 1363 aa12.49□□□□□ -0.41
RAB3GAP1-205ENST00000489858 SRPK2P78362 688 aaKnown RBP12.49□□□□□ -0.41
RAB3GAP1-205ENST00000489858 FBXO31Q5XUX0 539 aaPredicted RBP12.49□□□□□ -0.41
RAB3GAP1-205ENST00000489858 TRMT2AQ8IZ69 625 aaKnown RBP12.49□□□□□ -0.41
RAB3GAP1-205ENST00000489858 POGKQ9P215 609 aa12.49□□□□□ -0.41
RAB3GAP1-205ENST00000489858 TCERG1O14776 1098 aaKnown RBP12.48□□□□□ -0.41
RAB3GAP1-205ENST00000489858 SLC34A2O95436 690 aa12.48□□□□□ -0.41
RAB3GAP1-205ENST00000489858 PTGER2P43116 358 aa12.48□□□□□ -0.41
RAB3GAP1-205ENST00000489858 ERICH6Q7L0X2 663 aa12.48□□□□□ -0.41
RAB3GAP1-205ENST00000489858 RUNDC1Q96C34 613 aa12.48□□□□□ -0.41
RAB3GAP1-205ENST00000489858 PRAM1Q96QH2 718 aa12.48□□□□□ -0.41
RAB3GAP1-205ENST00000489858 TERF2IPQ9NYB0 399 aa12.48□□□□□ -0.41
RAB3GAP1-205ENST00000489858 PLIN1O60240 522 aa12.47□□□□□ -0.41
RAB3GAP1-205ENST00000489858 NRXN3Q9Y4C0 1643 aa12.47□□□□□ -0.41
RAB3GAP1-205ENST00000489858 ATP7BP35670 1465 aa12.46□□□□□ -0.41
RAB3GAP1-205ENST00000489858 MINK1Q8N4C8 1332 aaPredicted RBP12.46□□□□□ -0.41
RAB3GAP1-205ENST00000489858 TNNT2P45379 298 aaPredicted RBP12.46□□□□□ -0.41
RAB3GAP1-205ENST00000489858 SAFB2Q14151 953 aaKnown RBP eCLIP12.46□□□□□ -0.41
RAB3GAP1-205ENST00000489858 MS4A1P11836 297 aa12.45□□□□□ -0.42
RAB3GAP1-205ENST00000489858 HDGFL2Q7Z4V5 671 aaPredicted RBP12.45□□□□□ -0.42
RAB3GAP1-205ENST00000489858 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.45□□□□□ -0.42
RAB3GAP1-205ENST00000489858 TMC2Q8TDI7 906 aa12.45□□□□□ -0.42
RAB3GAP1-205ENST00000489858 ESF1Q9H501 851 aaKnown RBP12.45□□□□□ -0.42
RAB3GAP1-205ENST00000489858 COL3A1P02461 1466 aaPredicted RBP12.45□□□□□ -0.42
RAB3GAP1-205ENST00000489858 CD163L1Q9NR16 1453 aa12.45□□□□□ -0.42
RAB3GAP1-205ENST00000489858 MTHFSP49914 203 aa12.44□□□□□ -0.42
RAB3GAP1-205ENST00000489858 NLRP1Q9C000 1473 aa12.44□□□□□ -0.42
RAB3GAP1-205ENST00000489858 CPS1P31327 1500 aa12.43□□□□□ -0.42
RAB3GAP1-205ENST00000489858 MLECQ14165 292 aa12.43□□□□□ -0.42
RAB3GAP1-205ENST00000489858 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
RAB3GAP1-205ENST00000489858 TNRQ92752 1358 aa12.43□□□□□ -0.42
RAB3GAP1-205ENST00000489858 UBR1Q8IWV7 1749 aa12.42□□□□□ -0.42
RAB3GAP1-205ENST00000489858 NUDT7P0C024 238 aa12.42□□□□□ -0.42
RAB3GAP1-205ENST00000489858 ANP32AP39687 249 aaKnown RBP12.42□□□□□ -0.42
RAB3GAP1-205ENST00000489858 CCDC27Q2M243 656 aa12.42□□□□□ -0.42
RAB3GAP1-205ENST00000489858 WWC1Q8IX03 1113 aa12.42□□□□□ -0.42
RAB3GAP1-205ENST00000489858 PCDHGA4Q9Y5G9 962 aa12.42□□□□□ -0.42
RAB3GAP1-205ENST00000489858 PPP1R37O75864 691 aa12.41□□□□□ -0.42
RAB3GAP1-205ENST00000489858 C20orf194Q5TEA3 1177 aa12.41□□□□□ -0.42
RAB3GAP1-205ENST00000489858 CENPQQ7L2Z9 268 aaPredicted RBP12.41□□□□□ -0.42
RAB3GAP1-205ENST00000489858 WDR63Q8IWG1 891 aa12.41□□□□□ -0.42
RAB3GAP1-205ENST00000489858 CDK19Q9BWU1 502 aa12.41□□□□□ -0.42
RAB3GAP1-205ENST00000489858 ITSN1Q15811 1721 aa12.4□□□□□ -0.42
RAB3GAP1-205ENST00000489858 TECPR2O15040 1411 aa12.4□□□□□ -0.42
RAB3GAP1-205ENST00000489858 LSM11P83369 360 aaKnown RBP eCLIP12.4□□□□□ -0.42
RAB3GAP1-205ENST00000489858 ANKRD13DQ6ZTN6 518 aa12.4□□□□□ -0.42
RAB3GAP1-205ENST00000489858 TCP11L2Q8N4U5 519 aa12.4□□□□□ -0.42
RAB3GAP1-205ENST00000489858 ZMYM3Q14202 1370 aa12.4□□□□□ -0.42
RAB3GAP1-205ENST00000489858 MON2Q7Z3U7 1717 aa12.4□□□□□ -0.43
RAB3GAP1-205ENST00000489858 KDM2BQ8NHM5 1336 aa12.39□□□□□ -0.43
RAB3GAP1-205ENST00000489858 FAM135BQ49AJ0 1406 aa12.39□□□□□ -0.43
RAB3GAP1-205ENST00000489858 U2AF1L5P0DN76 240 aaPredicted RBP12.39□□□□□ -0.43
RAB3GAP1-205ENST00000489858 PBX2P40425 430 aa12.39□□□□□ -0.43
RAB3GAP1-205ENST00000489858 HDGFP51858 240 aaKnown RBP12.39□□□□□ -0.43
RAB3GAP1-205ENST00000489858 U2AF1Q01081 240 aaKnown RBP eCLIP12.39□□□□□ -0.43
RAB3GAP1-205ENST00000489858 CANXP27824 592 aaKnown RBP12.38□□□□□ -0.43
RAB3GAP1-205ENST00000489858 GGNBP2Q9H3C7 697 aa12.38□□□□□ -0.43
RAB3GAP1-205ENST00000489858 MYH16Q9H6N6 1097 aa12.38□□□□□ -0.43
RAB3GAP1-205ENST00000489858 LHX6Q9UPM6 363 aa12.38□□□□□ -0.43
RAB3GAP1-205ENST00000489858 MAPK8IP3Q9UPT6 1336 aa12.37□□□□□ -0.43
RAB3GAP1-205ENST00000489858 PDE3AQ14432 1141 aa12.37□□□□□ -0.43
RAB3GAP1-205ENST00000489858 RRP7AQ9Y3A4 280 aaKnown RBP12.37□□□□□ -0.43
RAB3GAP1-205ENST00000489858 AKAP12Q02952 1782 aa12.37□□□□□ -0.43
RAB3GAP1-205ENST00000489858 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
RAB3GAP1-205ENST00000489858 FYB1O15117 783 aa12.36□□□□□ -0.43
RAB3GAP1-205ENST00000489858 PNNQ9H307 717 aaKnown RBP12.36□□□□□ -0.43
RAB3GAP1-205ENST00000489858 TMEM2Q9UHN6 1383 aa12.35□□□□□ -0.43
RAB3GAP1-205ENST00000489858 BCAR3O75815 825 aa12.35□□□□□ -0.43
RAB3GAP1-205ENST00000489858 PDE4AP27815 886 aa12.35□□□□□ -0.43
RAB3GAP1-205ENST00000489858 NEUROD2Q15784 382 aa12.35□□□□□ -0.43
RAB3GAP1-205ENST00000489858 SIRT1Q96EB6 747 aa12.35□□□□□ -0.43
RAB3GAP1-205ENST00000489858 CABP1Q9NZU7 370 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms