RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 RWDD1Q9H446 243 aaPredicted RBP19.13■□□□□ 0.65
COL9A1-208ENST00000489611 IL13P35225 146 aa19.12■□□□□ 0.65
COL9A1-208ENST00000489611 BRPF1P55201 1214 aaPredicted RBP19.12■□□□□ 0.65
COL9A1-208ENST00000489611 NME9Q86XW9 330 aa19.12■□□□□ 0.65
COL9A1-208ENST00000489611 SMC4Q9NTJ3 1288 aa19.12■□□□□ 0.65
COL9A1-208ENST00000489611 PPM1GO15355 546 aaPredicted RBP19.11■□□□□ 0.65
COL9A1-208ENST00000489611 IGHDP01880 384 aa19.11■□□□□ 0.65
COL9A1-208ENST00000489611 DDX19BQ9UMR2 479 aa19.11■□□□□ 0.65
COL9A1-208ENST00000489611 TSR2Q969E8 191 aaKnown RBP19.1■□□□□ 0.65
COL9A1-208ENST00000489611 PROSER2Q86WR7 435 aaPredicted RBP19.1■□□□□ 0.65
COL9A1-208ENST00000489611 NWD1Q149M9 1564 aa19.09■□□□□ 0.65
COL9A1-208ENST00000489611 NALCNQ8IZF0 1738 aa19.09■□□□□ 0.65
COL9A1-208ENST00000489611 C8orf34Q49A92 452 aa19.09■□□□□ 0.65
COL9A1-208ENST00000489611 ATF7IPQ6VMQ6 1270 aa19.09■□□□□ 0.65
COL9A1-208ENST00000489611 NPM2Q86SE8 214 aaKnown RBP19.09■□□□□ 0.65
COL9A1-208ENST00000489611 C14orf37Q86TY3 774 aa19.09■□□□□ 0.65
COL9A1-208ENST00000489611 CHMP4BQ9H444 224 aaKnown RBP19.09■□□□□ 0.65
COL9A1-208ENST00000489611 ACEP12821 1306 aa19.08■□□□□ 0.65
COL9A1-208ENST00000489611 RLBP1P12271 317 aa19.08■□□□□ 0.65
COL9A1-208ENST00000489611 GNAI1P63096 354 aa19.08■□□□□ 0.65
COL9A1-208ENST00000489611 EMILIN1Q9Y6C2 1016 aa19.08■□□□□ 0.65
COL9A1-208ENST00000489611 PAK3O75914 559 aaPredicted RBP19.08■□□□□ 0.64
COL9A1-208ENST00000489611 IFT57Q9NWB7 429 aa19.08■□□□□ 0.64
COL9A1-208ENST00000489611 USP6P35125 1406 aa19.07■□□□□ 0.64
COL9A1-208ENST00000489611 SSH1Q8WYL5 1049 aa19.07■□□□□ 0.64
COL9A1-208ENST00000489611 BCL2L13Q9BXK5 485 aa19.07■□□□□ 0.64
COL9A1-208ENST00000489611 OVOS2A0A0J9YW53 1432 aa19.06■□□□□ 0.64
COL9A1-208ENST00000489611 OVOS2Q6IE36 1432 aa19.06■□□□□ 0.64
COL9A1-208ENST00000489611 ADGRL3Q9HAR2 1447 aa19.06■□□□□ 0.64
COL9A1-208ENST00000489611 TTC21BQ7Z4L5 1316 aa19.06■□□□□ 0.64
COL9A1-208ENST00000489611 TTC21AQ8NDW8 1320 aa19.06■□□□□ 0.64
COL9A1-208ENST00000489611 RGS3P49796 1198 aa19.06■□□□□ 0.64
COL9A1-208ENST00000489611 STRCQ7RTU9 1775 aa19.06■□□□□ 0.64
COL9A1-208ENST00000489611 TRIM27P14373 513 aa19.04■□□□□ 0.64
COL9A1-208ENST00000489611 HAP1P54257 671 aaPredicted RBP19.04■□□□□ 0.64
COL9A1-208ENST00000489611 ARHGAP45Q92619 1136 aa19.04■□□□□ 0.64
COL9A1-208ENST00000489611 USP31Q70CQ4 1352 aa19.04■□□□□ 0.64
COL9A1-208ENST00000489611 HDAC1Q13547 482 aaPredicted RBP19.04■□□□□ 0.64
COL9A1-208ENST00000489611 SKAP1Q86WV1 359 aa19.04■□□□□ 0.64
COL9A1-208ENST00000489611 PCDHB15Q9Y5E8 787 aa19.04■□□□□ 0.64
COL9A1-208ENST00000489611 ANKARQ7Z5J8 1434 aa19.03■□□□□ 0.64
COL9A1-208ENST00000489611 SSH2Q76I76 1423 aa19.03■□□□□ 0.64
COL9A1-208ENST00000489611 ZRANB1Q9UGI0 708 aa19.03■□□□□ 0.64
COL9A1-208ENST00000489611 DLG5Q8TDM6 1919 aa19.03■□□□□ 0.64
COL9A1-208ENST00000489611 FMN2Q9NZ56 1722 aa19.02■□□□□ 0.64
COL9A1-208ENST00000489611 NGDNQ8NEJ9 315 aaKnown RBP19.02■□□□□ 0.64
COL9A1-208ENST00000489611 HMOX1P09601 288 aa19.02■□□□□ 0.63
COL9A1-208ENST00000489611 ZNF853P0CG23 659 aa19.02■□□□□ 0.63
COL9A1-208ENST00000489611 STRCP1A6NGW2 1772 aa19.01■□□□□ 0.63
COL9A1-208ENST00000489611 RGPD8O14715 1765 aaPredicted RBP19.01■□□□□ 0.63
COL9A1-208ENST00000489611 PHACTR3Q96KR7 559 aa19.01■□□□□ 0.63
COL9A1-208ENST00000489611 CFAP44Q96MT7 982 aa19.01■□□□□ 0.63
COL9A1-208ENST00000489611 NOB1Q9ULX3 412 aaKnown RBP19.01■□□□□ 0.63
COL9A1-208ENST00000489611 TMEM94Q12767 1356 aa19.01■□□□□ 0.63
COL9A1-208ENST00000489611 DAXXQ9UER7 740 aaPredicted RBP19■□□□□ 0.63
COL9A1-208ENST00000489611 FBLN1P23142 703 aa18.99■□□□□ 0.63
COL9A1-208ENST00000489611 RGPD1P0DJD0 1748 aa18.98■□□□□ 0.63
COL9A1-208ENST00000489611 RRS1Q15050 365 aaKnown RBP18.98■□□□□ 0.63
COL9A1-208ENST00000489611 ITPRIPQ8IWB1 547 aa18.98■□□□□ 0.63
COL9A1-208ENST00000489611 C19orf44Q9H6X5 657 aa18.98■□□□□ 0.63
COL9A1-208ENST00000489611 USP35Q9P2H5 1018 aa18.98■□□□□ 0.63
COL9A1-208ENST00000489611 ZNF335Q9H4Z2 1342 aaPredicted RBP18.98■□□□□ 0.63
COL9A1-208ENST00000489611 ESCO1Q5FWF5 840 aa18.98■□□□□ 0.63
COL9A1-208ENST00000489611 TNNQ9UQP3 1299 aa18.98■□□□□ 0.63
COL9A1-208ENST00000489611 PHF8Q9UPP1 1060 aa18.97■□□□□ 0.63
COL9A1-208ENST00000489611 KIF24Q5T7B8 1368 aa18.97■□□□□ 0.63
COL9A1-208ENST00000489611 VAMP4O75379 141 aa18.96■□□□□ 0.63
COL9A1-208ENST00000489611 ZBTB40Q9NUA8 1239 aa18.96■□□□□ 0.63
COL9A1-208ENST00000489611 ORAI2Q96SN7 254 aa18.96■□□□□ 0.63
COL9A1-208ENST00000489611 PDZRN3Q9UPQ7 1066 aa18.96■□□□□ 0.63
COL9A1-208ENST00000489611 USP54Q70EL1 1684 aa18.95■□□□□ 0.62
COL9A1-208ENST00000489611 EIF4A2Q14240 407 aaKnown RBP18.95■□□□□ 0.62
COL9A1-208ENST00000489611 ARHGEF10O15013 1369 aa18.95■□□□□ 0.62
COL9A1-208ENST00000489611 RTL5Q5HYW3 569 aaPredicted RBP18.94■□□□□ 0.62
COL9A1-208ENST00000489611 UPF2Q9HAU5 1272 aaKnown RBP18.94■□□□□ 0.62
COL9A1-208ENST00000489611 LAS1LQ9Y4W2 734 aaKnown RBP18.94■□□□□ 0.62
COL9A1-208ENST00000489611 TMEM57Q8N5G2 664 aa18.94■□□□□ 0.62
COL9A1-208ENST00000489611 MBIPQ9NS73 344 aa18.94■□□□□ 0.62
COL9A1-208ENST00000489611 SMC5Q8IY18 1101 aa18.93■□□□□ 0.62
COL9A1-208ENST00000489611 SBNO1A3KN83 1393 aa18.93■□□□□ 0.62
COL9A1-208ENST00000489611 AEBP2Q6ZN18 517 aaPredicted RBP18.92■□□□□ 0.62
COL9A1-208ENST00000489611 MRPL50Q8N5N7 158 aaKnown RBP18.92■□□□□ 0.62
COL9A1-208ENST00000489611 FLT4P35916 1363 aa18.92■□□□□ 0.62
COL9A1-208ENST00000489611 PEAK1Q9H792 1746 aa18.92■□□□□ 0.62
COL9A1-208ENST00000489611 ATF3P18847 181 aa18.92■□□□□ 0.62
COL9A1-208ENST00000489611 TWISTNBQ3B726 338 aaPredicted RBP18.92■□□□□ 0.62
COL9A1-208ENST00000489611 API5Q9BZZ5 524 aaKnown RBP18.91■□□□□ 0.62
COL9A1-208ENST00000489611 NCOA3Q9Y6Q9 1424 aa18.9■□□□□ 0.62
COL9A1-208ENST00000489611 KIAA0232Q92628 1395 aa18.9■□□□□ 0.62
COL9A1-208ENST00000489611 SULT6B1Q6IMI4 303 aa18.9■□□□□ 0.62
COL9A1-208ENST00000489611 C1orf167Q5SNV9 1468 aa18.89■□□□□ 0.62
COL9A1-208ENST00000489611 FOXO3O43524 673 aa18.89■□□□□ 0.61
COL9A1-208ENST00000489611 ABCC4O15439 1325 aa18.88■□□□□ 0.61
COL9A1-208ENST00000489611 PIK3C2AO00443 1686 aa18.88■□□□□ 0.61
COL9A1-208ENST00000489611 KDRP35968 1356 aa18.88■□□□□ 0.61
COL9A1-208ENST00000489611 PSME1Q06323 249 aa18.88■□□□□ 0.61
COL9A1-208ENST00000489611 NUTM2GQ5VZR2 741 aa18.88■□□□□ 0.61
COL9A1-208ENST00000489611 MSH6P52701 1360 aa18.87■□□□□ 0.61
COL9A1-208ENST00000489611 SOX12O15370 315 aa18.87■□□□□ 0.61
COL9A1-208ENST00000489611 XPCQ01831 940 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms