RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 SKOR2Q2VWA4 1001 aaPredicted RBP13.72□□□□□ -0.21
NEB-215ENST00000489048 GBP4Q96PP9 640 aa13.72□□□□□ -0.21
NEB-215ENST00000489048 MYO5BQ9ULV0 1848 aa13.72□□□□□ -0.21
NEB-215ENST00000489048 PREX1Q8TCU6 1659 aa13.72□□□□□ -0.21
NEB-215ENST00000489048 NUTM2DQ5VT03 806 aaPredicted RBP13.72□□□□□ -0.21
NEB-215ENST00000489048 HDGFL2Q7Z4V5 671 aaPredicted RBP13.72□□□□□ -0.21
NEB-215ENST00000489048 MRPL50Q8N5N7 158 aaKnown RBP13.72□□□□□ -0.21
NEB-215ENST00000489048 ABCC4O15439 1325 aa13.71□□□□□ -0.21
NEB-215ENST00000489048 ATP7BP35670 1465 aa13.71□□□□□ -0.21
NEB-215ENST00000489048 YEATS2Q9ULM3 1422 aa13.71□□□□□ -0.21
NEB-215ENST00000489048 CALD1Q05682 793 aaKnown RBP13.71□□□□□ -0.21
NEB-215ENST00000489048 CLEC17AQ6ZS10 378 aa13.71□□□□□ -0.21
NEB-215ENST00000489048 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.22
NEB-215ENST00000489048 VAMP4O75379 141 aa13.7□□□□□ -0.22
NEB-215ENST00000489048 SAFB2Q14151 953 aaKnown RBP eCLIP13.7□□□□□ -0.22
NEB-215ENST00000489048 DLC1Q96QB1 1528 aa13.7□□□□□ -0.22
NEB-215ENST00000489048 HSP90AB1P08238 724 aaKnown RBP13.7□□□□□ -0.22
NEB-215ENST00000489048 ALKQ9UM73 1620 aa13.7□□□□□ -0.22
NEB-215ENST00000489048 NFE2L2Q16236 605 aa13.7□□□□□ -0.22
NEB-215ENST00000489048 PRAM1Q96QH2 718 aa13.7□□□□□ -0.22
NEB-215ENST00000489048 ZNF853P0CG23 659 aa13.69□□□□□ -0.22
NEB-215ENST00000489048 IFT57Q9NWB7 429 aa13.69□□□□□ -0.22
NEB-215ENST00000489048 K7ELQ4 463 aaPredicted RBP13.69□□□□□ -0.22
NEB-215ENST00000489048 MINK1Q8N4C8 1332 aaPredicted RBP13.68□□□□□ -0.22
NEB-215ENST00000489048 PRKAR2BP31323 418 aa13.68□□□□□ -0.22
NEB-215ENST00000489048 TBC1D9Q6ZT07 1266 aa13.68□□□□□ -0.22
NEB-215ENST00000489048 RICTORQ6R327 1708 aa13.68□□□□□ -0.22
NEB-215ENST00000489048 ANKRD45Q5TZF3 282 aa13.68□□□□□ -0.22
NEB-215ENST00000489048 STK26Q9P289 416 aa13.68□□□□□ -0.22
NEB-215ENST00000489048 CFAP44Q96MT7 982 aa13.67□□□□□ -0.22
NEB-215ENST00000489048 POLKQ9UBT6 870 aa13.67□□□□□ -0.22
NEB-215ENST00000489048 IBTKQ9P2D0 1353 aaPredicted RBP13.67□□□□□ -0.22
NEB-215ENST00000489048 GNAI1P63096 354 aa13.67□□□□□ -0.22
NEB-215ENST00000489048 SIRT2Q8IXJ6 389 aa13.67□□□□□ -0.22
NEB-215ENST00000489048 ARXQ96QS3 562 aa13.67□□□□□ -0.22
NEB-215ENST00000489048 CDK12Q9NYV4 1490 aaPredicted RBP13.67□□□□□ -0.22
NEB-215ENST00000489048 NPM1P06748 294 aaKnown RBP eCLIP13.66□□□□□ -0.22
NEB-215ENST00000489048 CDK19Q9BWU1 502 aa13.66□□□□□ -0.22
NEB-215ENST00000489048 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
NEB-215ENST00000489048 SPATA31D1Q6ZQQ2 1576 aa13.65□□□□□ -0.22
NEB-215ENST00000489048 CDC45O75419 566 aa13.65□□□□□ -0.22
NEB-215ENST00000489048 ESPNB1AK53 854 aa13.65□□□□□ -0.22
NEB-215ENST00000489048 GAS2L3Q86XJ1 694 aa13.65□□□□□ -0.22
NEB-215ENST00000489048 AATKQ6ZMQ8 1374 aa13.64□□□□□ -0.23
NEB-215ENST00000489048 CABP1Q9NZU7 370 aa13.64□□□□□ -0.23
NEB-215ENST00000489048 KNDC1Q76NI1 1749 aa13.64□□□□□ -0.23
NEB-215ENST00000489048 API5Q9BZZ5 524 aaKnown RBP13.64□□□□□ -0.23
NEB-215ENST00000489048 MAP2P11137 1827 aaKnown RBP13.64□□□□□ -0.23
NEB-215ENST00000489048 IL13P35225 146 aa13.63□□□□□ -0.23
NEB-215ENST00000489048 TSPYL6Q8N831 410 aa13.63□□□□□ -0.23
NEB-215ENST00000489048 PHACTR3Q96KR7 559 aa13.63□□□□□ -0.23
NEB-215ENST00000489048 CPSF1Q10570 1443 aaKnown RBP13.63□□□□□ -0.23
NEB-215ENST00000489048 MBIPQ9NS73 344 aa13.63□□□□□ -0.23
NEB-215ENST00000489048 SETD1AO15047 1707 aaKnown RBP13.63□□□□□ -0.23
NEB-215ENST00000489048 EDC4Q6P2E9 1401 aaKnown RBP13.63□□□□□ -0.23
NEB-215ENST00000489048 LMOD3Q0VAK6 560 aa13.63□□□□□ -0.23
NEB-215ENST00000489048 C1orf115Q9H7X2 142 aa13.63□□□□□ -0.23
NEB-215ENST00000489048 ERBB4Q15303 1308 aa13.62□□□□□ -0.23
NEB-215ENST00000489048 KDM4FA0A1W2PPD8 638 aa13.62□□□□□ -0.23
NEB-215ENST00000489048 GAS2L2Q8NHY3 880 aa13.62□□□□□ -0.23
NEB-215ENST00000489048 GSPT1P15170 499 aaKnown RBP13.62□□□□□ -0.23
NEB-215ENST00000489048 RABEP1Q15276 862 aa13.62□□□□□ -0.23
NEB-215ENST00000489048 KLHL40Q2TBA0 621 aa13.62□□□□□ -0.23
NEB-215ENST00000489048 RAPGEF3O95398 923 aa13.61□□□□□ -0.23
NEB-215ENST00000489048 TWISTNBQ3B726 338 aaPredicted RBP13.61□□□□□ -0.23
NEB-215ENST00000489048 PLEKHM2Q8IWE5 1019 aa13.61□□□□□ -0.23
NEB-215ENST00000489048 NAP1L5Q96NT1 182 aaPredicted RBP13.61□□□□□ -0.23
NEB-215ENST00000489048 PPP1R9BQ96SB3 815 aa13.61□□□□□ -0.23
NEB-215ENST00000489048 DCTPP1Q9H773 170 aa13.61□□□□□ -0.23
NEB-215ENST00000489048 DLG5Q8TDM6 1919 aa13.61□□□□□ -0.23
NEB-215ENST00000489048 RIMS2Q9UQ26 1411 aa13.61□□□□□ -0.23
NEB-215ENST00000489048 GOLGA6L22H0YM25 854 aa13.61□□□□□ -0.23
NEB-215ENST00000489048 HSP90AA1P07900 732 aaKnown RBP13.61□□□□□ -0.23
NEB-215ENST00000489048 SSFA2P28290 1259 aa13.6□□□□□ -0.23
NEB-215ENST00000489048 CCDC173Q0VFZ6 552 aa13.6□□□□□ -0.23
NEB-215ENST00000489048 RBM42Q9BTD8 480 aaKnown RBP13.6□□□□□ -0.23
NEB-215ENST00000489048 BAG4O95429 457 aaKnown RBP13.59□□□□□ -0.23
NEB-215ENST00000489048 CYP2E1P05181 493 aaPredicted RBP13.59□□□□□ -0.23
NEB-215ENST00000489048 TTC22Q5TAA0 569 aa13.59□□□□□ -0.23
NEB-215ENST00000489048 TRIM44Q96DX7 344 aaPredicted RBP13.59□□□□□ -0.23
NEB-215ENST00000489048 THUMPD2Q9BTF0 503 aaKnown RBP13.59□□□□□ -0.23
NEB-215ENST00000489048 NRKQ7Z2Y5 1582 aa13.59□□□□□ -0.23
NEB-215ENST00000489048 ATP10DQ9P241 1426 aa13.59□□□□□ -0.23
NEB-215ENST00000489048 INTS3Q68E01 1043 aaKnown RBP13.59□□□□□ -0.23
NEB-215ENST00000489048 HMOX1P09601 288 aa13.58□□□□□ -0.24
NEB-215ENST00000489048 MON2Q7Z3U7 1717 aa13.58□□□□□ -0.24
NEB-215ENST00000489048 RGS12O14924 1447 aa13.58□□□□□ -0.24
NEB-215ENST00000489048 NUCB2P80303 420 aa13.58□□□□□ -0.24
NEB-215ENST00000489048 C8orf58Q8NAV2 365 aa13.58□□□□□ -0.24
NEB-215ENST00000489048 ZNF445P59923 1031 aa13.57□□□□□ -0.24
NEB-215ENST00000489048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.57□□□□□ -0.24
NEB-215ENST00000489048 ANKRD44Q8N8A2 993 aa13.57□□□□□ -0.24
NEB-215ENST00000489048 USP26Q9BXU7 913 aa13.57□□□□□ -0.24
NEB-215ENST00000489048 EMILIN1Q9Y6C2 1016 aa13.57□□□□□ -0.24
NEB-215ENST00000489048 RRP9O43818 475 aaKnown RBP13.56□□□□□ -0.24
NEB-215ENST00000489048 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
NEB-215ENST00000489048 FBLN1P23142 703 aa13.55□□□□□ -0.24
NEB-215ENST00000489048 RPAP2Q8IXW5 612 aaPredicted RBP13.55□□□□□ -0.24
NEB-215ENST00000489048 CWC22Q9HCG8 908 aaKnown RBP13.55□□□□□ -0.24
NEB-215ENST00000489048 C3P01024 1663 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms