RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 IDI1Q13907 227 aa24.35■■□□□ 1.49
HMG20B-213ENST00000488973 SAFB2Q14151 953 aaKnown RBP eCLIP24.35■■□□□ 1.49
HMG20B-213ENST00000488973 RAB3GAP1Q15042 981 aa24.35■■□□□ 1.49
HMG20B-213ENST00000488973 SKOR2Q2VWA4 1001 aaPredicted RBP24.34■■□□□ 1.49
HMG20B-213ENST00000488973 PTPRMP28827 1452 aa24.34■■□□□ 1.49
HMG20B-213ENST00000488973 LRRC7Q96NW7 1537 aa24.34■■□□□ 1.49
HMG20B-213ENST00000488973 FCHSD2O94868 740 aa24.34■■□□□ 1.49
HMG20B-213ENST00000488973 PREX1Q8TCU6 1659 aa24.33■■□□□ 1.49
HMG20B-213ENST00000488973 PIK3R4Q99570 1358 aa24.33■■□□□ 1.49
HMG20B-213ENST00000488973 MYO5BQ9ULV0 1848 aa24.33■■□□□ 1.49
HMG20B-213ENST00000488973 KIF2CQ99661 725 aa24.33■■□□□ 1.48
HMG20B-213ENST00000488973 A0A0U1RQG5 324 aaPredicted RBP24.32■■□□□ 1.48
HMG20B-213ENST00000488973 ARHGAP45Q92619 1136 aa24.32■■□□□ 1.48
HMG20B-213ENST00000488973 ZBTB7BO15156 539 aaPredicted RBP24.31■■□□□ 1.48
HMG20B-213ENST00000488973 PTCH1Q13635 1447 aa24.31■■□□□ 1.48
HMG20B-213ENST00000488973 FAM135BQ49AJ0 1406 aa24.31■■□□□ 1.48
HMG20B-213ENST00000488973 ANKRD45Q5TZF3 282 aa24.29■■□□□ 1.48
HMG20B-213ENST00000488973 STK26Q9P289 416 aa24.29■■□□□ 1.48
HMG20B-213ENST00000488973 HDGFL2Q7Z4V5 671 aaPredicted RBP24.28■■□□□ 1.48
HMG20B-213ENST00000488973 K7ELQ4 463 aaPredicted RBP24.27■■□□□ 1.48
HMG20B-213ENST00000488973 NAP1L5Q96NT1 182 aaPredicted RBP24.27■■□□□ 1.48
HMG20B-213ENST00000488973 MRPL50Q8N5N7 158 aaKnown RBP24.26■■□□□ 1.47
HMG20B-213ENST00000488973 TBC1D9Q6ZT07 1266 aa24.26■■□□□ 1.47
HMG20B-213ENST00000488973 MAP2P11137 1827 aaKnown RBP24.25■■□□□ 1.47
HMG20B-213ENST00000488973 ESPNB1AK53 854 aa24.25■■□□□ 1.47
HMG20B-213ENST00000488973 VAMP4O75379 141 aa24.25■■□□□ 1.47
HMG20B-213ENST00000488973 CALD1Q05682 793 aaKnown RBP24.25■■□□□ 1.47
HMG20B-213ENST00000488973 TMEM131LA2VDJ0 1609 aa24.25■■□□□ 1.47
HMG20B-213ENST00000488973 MINK1Q8N4C8 1332 aaPredicted RBP24.25■■□□□ 1.47
HMG20B-213ENST00000488973 YTHDC2Q9H6S0 1430 aaKnown RBP24.24■■□□□ 1.47
HMG20B-213ENST00000488973 PRKAR2BP31323 418 aa24.24■■□□□ 1.47
HMG20B-213ENST00000488973 FBXO31Q5XUX0 539 aaPredicted RBP24.24■■□□□ 1.47
HMG20B-213ENST00000488973 PRAM1Q96QH2 718 aa24.23■■□□□ 1.47
HMG20B-213ENST00000488973 CLEC17AQ6ZS10 378 aa24.23■■□□□ 1.47
HMG20B-213ENST00000488973 GAS2L3Q86XJ1 694 aa24.23■■□□□ 1.47
HMG20B-213ENST00000488973 ABCC4O15439 1325 aa24.22■■□□□ 1.47
HMG20B-213ENST00000488973 CD2BP2O95400 341 aaKnown RBP24.22■■□□□ 1.47
HMG20B-213ENST00000488973 NFE2L2Q16236 605 aa24.22■■□□□ 1.47
HMG20B-213ENST00000488973 SPATA31D1Q6ZQQ2 1576 aa24.22■■□□□ 1.47
HMG20B-213ENST00000488973 TRIM44Q96DX7 344 aaPredicted RBP24.21■■□□□ 1.47
HMG20B-213ENST00000488973 GNAI1P63096 354 aa24.2■■□□□ 1.46
HMG20B-213ENST00000488973 SIRT2Q8IXJ6 389 aa24.2■■□□□ 1.46
HMG20B-213ENST00000488973 IFT57Q9NWB7 429 aa24.2■■□□□ 1.46
HMG20B-213ENST00000488973 CDC45O75419 566 aa24.2■■□□□ 1.46
HMG20B-213ENST00000488973 C1orf115Q9H7X2 142 aa24.2■■□□□ 1.46
HMG20B-213ENST00000488973 CFAP44Q96MT7 982 aa24.19■■□□□ 1.46
HMG20B-213ENST00000488973 DLG5Q8TDM6 1919 aa24.19■■□□□ 1.46
HMG20B-213ENST00000488973 GOLGA6L22H0YM25 854 aa24.18■■□□□ 1.46
HMG20B-213ENST00000488973 CDK19Q9BWU1 502 aa24.18■■□□□ 1.46
HMG20B-213ENST00000488973 POLKQ9UBT6 870 aa24.18■■□□□ 1.46
HMG20B-213ENST00000488973 ERBB4Q15303 1308 aa24.18■■□□□ 1.46
HMG20B-213ENST00000488973 IBTKQ9P2D0 1353 aaPredicted RBP24.18■■□□□ 1.46
HMG20B-213ENST00000488973 ZNF853P0CG23 659 aa24.17■■□□□ 1.46
HMG20B-213ENST00000488973 CABP1Q9NZU7 370 aa24.17■■□□□ 1.46
HMG20B-213ENST00000488973 AK9Q5TCS8 1911 aa24.16■■□□□ 1.46
HMG20B-213ENST00000488973 TSPYL6Q8N831 410 aa24.16■■□□□ 1.46
HMG20B-213ENST00000488973 GAS2L2Q8NHY3 880 aa24.16■■□□□ 1.46
HMG20B-213ENST00000488973 PHACTR3Q96KR7 559 aa24.16■■□□□ 1.46
HMG20B-213ENST00000488973 RBM42Q9BTD8 480 aaKnown RBP24.16■■□□□ 1.46
HMG20B-213ENST00000488973 KIF24Q5T7B8 1368 aa24.16■■□□□ 1.46
HMG20B-213ENST00000488973 ATP7BP35670 1465 aa24.16■■□□□ 1.46
HMG20B-213ENST00000488973 ALKQ9UM73 1620 aa24.15■■□□□ 1.46
HMG20B-213ENST00000488973 FOXD4L1Q9NU39 408 aa24.15■■□□□ 1.46
HMG20B-213ENST00000488973 SSFA2P28290 1259 aa24.14■■□□□ 1.46
HMG20B-213ENST00000488973 MLECQ14165 292 aa24.14■■□□□ 1.46
HMG20B-213ENST00000488973 API5Q9BZZ5 524 aaKnown RBP24.14■■□□□ 1.46
HMG20B-213ENST00000488973 PDIA4P13667 645 aaKnown RBP24.14■■□□□ 1.45
HMG20B-213ENST00000488973 KLHL40Q2TBA0 621 aa24.14■■□□□ 1.45
HMG20B-213ENST00000488973 PRDM4Q9UKN5 801 aa24.14■■□□□ 1.45
HMG20B-213ENST00000488973 KNDC1Q76NI1 1749 aa24.14■■□□□ 1.45
HMG20B-213ENST00000488973 MBIPQ9NS73 344 aa24.13■■□□□ 1.45
HMG20B-213ENST00000488973 CCDC173Q0VFZ6 552 aa24.13■■□□□ 1.45
HMG20B-213ENST00000488973 RABEP1Q15276 862 aa24.13■■□□□ 1.45
HMG20B-213ENST00000488973 THUMPD2Q9BTF0 503 aaKnown RBP24.12■■□□□ 1.45
HMG20B-213ENST00000488973 TWISTNBQ3B726 338 aaPredicted RBP24.12■■□□□ 1.45
HMG20B-213ENST00000488973 BAG4O95429 457 aaKnown RBP24.11■■□□□ 1.45
HMG20B-213ENST00000488973 PPP1R9BQ96SB3 815 aa24.11■■□□□ 1.45
HMG20B-213ENST00000488973 HMOX1P09601 288 aa24.11■■□□□ 1.45
HMG20B-213ENST00000488973 GSPT1P15170 499 aaKnown RBP24.11■■□□□ 1.45
HMG20B-213ENST00000488973 PLEKHM2Q8IWE5 1019 aa24.11■■□□□ 1.45
HMG20B-213ENST00000488973 A2ML1A8K2U0 1454 aa24.1■■□□□ 1.45
HMG20B-213ENST00000488973 CDK12Q9NYV4 1490 aaPredicted RBP24.1■■□□□ 1.45
HMG20B-213ENST00000488973 LMOD3Q0VAK6 560 aa24.1■■□□□ 1.45
HMG20B-213ENST00000488973 ESF1Q9H501 851 aaKnown RBP24.1■■□□□ 1.45
HMG20B-213ENST00000488973 DCTPP1Q9H773 170 aa24.1■■□□□ 1.45
HMG20B-213ENST00000488973 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.09■■□□□ 1.45
HMG20B-213ENST00000488973 PDCL3Q9H2J4 239 aa24.09■■□□□ 1.45
HMG20B-213ENST00000488973 DLC1Q96QB1 1528 aa24.08■■□□□ 1.45
HMG20B-213ENST00000488973 IL13P35225 146 aa24.08■■□□□ 1.45
HMG20B-213ENST00000488973 NUCB2P80303 420 aa24.08■■□□□ 1.45
HMG20B-213ENST00000488973 STAG3Q9UJ98 1225 aa24.08■■□□□ 1.45
HMG20B-213ENST00000488973 DDX49Q9Y6V7 483 aaKnown RBP24.08■■□□□ 1.45
HMG20B-213ENST00000488973 ELL2O00472 640 aaPredicted RBP24.08■■□□□ 1.44
HMG20B-213ENST00000488973 NASPP49321 788 aaPredicted RBP24.08■■□□□ 1.44
HMG20B-213ENST00000488973 TTC22Q5TAA0 569 aa24.08■■□□□ 1.44
HMG20B-213ENST00000488973 SENP3Q9H4L4 574 aaPredicted RBP24.08■■□□□ 1.44
HMG20B-213ENST00000488973 FBLN1P23142 703 aa24.07■■□□□ 1.44
HMG20B-213ENST00000488973 C8orf58Q8NAV2 365 aa24.06■■□□□ 1.44
HMG20B-213ENST00000488973 ANP32BQ92688 251 aaKnown RBP24.05■■□□□ 1.44
HMG20B-213ENST00000488973 RIMS2Q9UQ26 1411 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms