RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 ROCK1Q13464 1354 aa7.74□□□□□ -1.17
SIK3-212ENST00000488337 EIF4G3O43432 1585 aaKnown RBP7.74□□□□□ -1.17
SIK3-212ENST00000488337 UGGT2Q9NYU1 1516 aa7.74□□□□□ -1.17
SIK3-212ENST00000488337 MAP9Q49MG5 647 aa7.73□□□□□ -1.17
SIK3-212ENST00000488337 MTA1Q13330 715 aa7.73□□□□□ -1.17
SIK3-212ENST00000488337 CCDC96Q2M329 555 aa7.73□□□□□ -1.17
SIK3-212ENST00000488337 MKL1Q969V6 931 aa7.73□□□□□ -1.17
SIK3-212ENST00000488337 RPS6KL1Q9Y6S9 549 aa7.73□□□□□ -1.17
SIK3-212ENST00000488337 KIF3CO14782 793 aa7.73□□□□□ -1.17
SIK3-212ENST00000488337 CHAF1AQ13111 956 aaPredicted RBP7.73□□□□□ -1.17
SIK3-212ENST00000488337 NOLC1Q14978 699 aaKnown RBP eCLIP7.73□□□□□ -1.17
SIK3-212ENST00000488337 SUGP1Q8IWZ8 645 aaKnown RBP7.73□□□□□ -1.17
SIK3-212ENST00000488337 UPF2Q9HAU5 1272 aaKnown RBP7.73□□□□□ -1.17
SIK3-212ENST00000488337 YEATS2Q9ULM3 1422 aa7.73□□□□□ -1.17
SIK3-212ENST00000488337 ANKRD30AQ9BXX3 1397 aa7.73□□□□□ -1.17
SIK3-212ENST00000488337 EPRSP07814 1512 aaKnown RBP7.73□□□□□ -1.17
SIK3-212ENST00000488337 WDR43Q15061 677 aaKnown RBP eCLIP7.73□□□□□ -1.17
SIK3-212ENST00000488337 DAPK1P53355 1430 aa7.72□□□□□ -1.17
SIK3-212ENST00000488337 COQ9O75208 318 aa7.72□□□□□ -1.17
SIK3-212ENST00000488337 DNAJC14Q6Y2X3 702 aaPredicted RBP7.72□□□□□ -1.17
SIK3-212ENST00000488337 TRDNQ13061 729 aa7.72□□□□□ -1.17
SIK3-212ENST00000488337 KRT222Q8N1A0 295 aa7.72□□□□□ -1.17
SIK3-212ENST00000488337 CDCA7LQ96GN5 454 aa7.72□□□□□ -1.17
SIK3-212ENST00000488337 RIOK3O14730 519 aaKnown RBP7.72□□□□□ -1.17
SIK3-212ENST00000488337 JRKLQ9Y4A0 524 aa7.72□□□□□ -1.17
SIK3-212ENST00000488337 PLEKHG2Q9H7P9 1386 aa7.71□□□□□ -1.17
SIK3-212ENST00000488337 TCOF1Q13428 1488 aaKnown RBP7.71□□□□□ -1.18
SIK3-212ENST00000488337 MYO1CO00159 1063 aa7.71□□□□□ -1.18
SIK3-212ENST00000488337 MAPK8IP3Q9UPT6 1336 aa7.71□□□□□ -1.18
SIK3-212ENST00000488337 ZSCAN23Q3MJ62 389 aa7.71□□□□□ -1.18
SIK3-212ENST00000488337 C1QTNF12Q5T7M4 302 aa7.71□□□□□ -1.18
SIK3-212ENST00000488337 RPAINQ86UA6 219 aa7.71□□□□□ -1.18
SIK3-212ENST00000488337 TBC1D22AQ8WUA7 517 aa7.71□□□□□ -1.18
SIK3-212ENST00000488337 SNX21Q969T3 373 aa7.71□□□□□ -1.18
SIK3-212ENST00000488337 LCMT1Q9UIC8 334 aa7.71□□□□□ -1.18
SIK3-212ENST00000488337 ABCC5O15440 1437 aa7.71□□□□□ -1.18
SIK3-212ENST00000488337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.7□□□□□ -1.18
SIK3-212ENST00000488337 TMX1Q9H3N1 280 aa7.7□□□□□ -1.18
SIK3-212ENST00000488337 CALR3Q96L12 384 aaKnown RBP7.7□□□□□ -1.18
SIK3-212ENST00000488337 FAM210AQ96ND0 272 aa7.7□□□□□ -1.18
SIK3-212ENST00000488337 TRIM66O15016 1216 aa7.7□□□□□ -1.18
SIK3-212ENST00000488337 GBP4Q96PP9 640 aa7.7□□□□□ -1.18
SIK3-212ENST00000488337 CDK13Q14004 1512 aaKnown RBP7.7□□□□□ -1.18
SIK3-212ENST00000488337 TDO2P48775 406 aa7.7□□□□□ -1.18
SIK3-212ENST00000488337 RBM6P78332 1123 aaKnown RBP7.7□□□□□ -1.18
SIK3-212ENST00000488337 CARMIL2Q6F5E8 1435 aa7.7□□□□□ -1.18
SIK3-212ENST00000488337 GPT2Q8TD30 523 aa7.7□□□□□ -1.18
SIK3-212ENST00000488337 JPH4Q96JJ6 628 aa7.7□□□□□ -1.18
SIK3-212ENST00000488337 ZNF608Q9ULD9 1512 aaPredicted RBP7.7□□□□□ -1.18
SIK3-212ENST00000488337 CLASP1Q7Z460 1538 aa7.69□□□□□ -1.18
SIK3-212ENST00000488337 SYNJ2O15056 1496 aa7.69□□□□□ -1.18
SIK3-212ENST00000488337 TEX14Q8IWB6 1497 aa7.69□□□□□ -1.18
SIK3-212ENST00000488337 PRIM1P49642 420 aaKnown RBP7.69□□□□□ -1.18
SIK3-212ENST00000488337 SYT10Q6XYQ8 523 aa7.69□□□□□ -1.18
SIK3-212ENST00000488337 PACS2Q86VP3 889 aa7.69□□□□□ -1.18
SIK3-212ENST00000488337 ERICH4A6NGS2 130 aa7.69□□□□□ -1.18
SIK3-212ENST00000488337 SSR1P43307 286 aaKnown RBP7.69□□□□□ -1.18
SIK3-212ENST00000488337 TNNT3P45378 269 aaPredicted RBP7.69□□□□□ -1.18
SIK3-212ENST00000488337 NOL10Q9BSC4 688 aaKnown RBP7.68□□□□□ -1.18
SIK3-212ENST00000488337 KNSTRNQ9Y448 316 aa7.68□□□□□ -1.18
SIK3-212ENST00000488337 PAXBP1Q9Y5B6 917 aa7.68□□□□□ -1.18
SIK3-212ENST00000488337 FAM163BP0C2L3 166 aa7.68□□□□□ -1.18
SIK3-212ENST00000488337 TMF1P82094 1093 aa7.68□□□□□ -1.18
SIK3-212ENST00000488337 IQUBQ8NA54 791 aa7.68□□□□□ -1.18
SIK3-212ENST00000488337 TRERF1Q96PN7 1200 aa7.68□□□□□ -1.18
SIK3-212ENST00000488337 ANKRD50Q9ULJ7 1429 aa7.68□□□□□ -1.18
SIK3-212ENST00000488337 ARID4AP29374 1257 aaPredicted RBP7.68□□□□□ -1.18
SIK3-212ENST00000488337 AK9Q5TCS8 1911 aa7.68□□□□□ -1.18
SIK3-212ENST00000488337 CCDC91Q7Z6B0 441 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 TATDN2Q93075 761 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 KIF2CQ99661 725 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 UBXN6Q9BZV1 441 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 KDM5CP41229 1560 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 IGHDP01880 384 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 LRCH2Q5VUJ6 765 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 SRLQ86TD4 932 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 NBPF3Q9H094 633 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 GRIN2AQ12879 1464 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 CPP00450 1065 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 FAXDC2Q96IV6 333 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 CEP89Q96ST8 783 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 SPAG9O60271 1321 aaKnown RBP7.67□□□□□ -1.18
SIK3-212ENST00000488337 SLFNL1Q499Z3 407 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 DIAPH3Q9NSV4 1193 aa7.67□□□□□ -1.18
SIK3-212ENST00000488337 MAGI3Q5TCQ9 1506 aa7.66□□□□□ -1.18
SIK3-212ENST00000488337 IQGAP2Q13576 1575 aa7.66□□□□□ -1.18
SIK3-212ENST00000488337 CASC1Q6TDU7 716 aa7.66□□□□□ -1.18
SIK3-212ENST00000488337 KIAA1524Q8TCG1 905 aa7.66□□□□□ -1.18
SIK3-212ENST00000488337 ST7Q9NRC1 585 aa7.66□□□□□ -1.18
SIK3-212ENST00000488337 KDM6BO15054 1643 aa7.66□□□□□ -1.18
SIK3-212ENST00000488337 C21orf2O43822 256 aa7.66□□□□□ -1.18
SIK3-212ENST00000488337 CYP2E1P05181 493 aaPredicted RBP7.66□□□□□ -1.18
SIK3-212ENST00000488337 KMT5BQ4FZB7 885 aa7.66□□□□□ -1.18
SIK3-212ENST00000488337 LRSAM1Q6UWE0 723 aa7.66□□□□□ -1.18
SIK3-212ENST00000488337 KIAA0586Q9BVV6 1533 aa7.66□□□□□ -1.18
SIK3-212ENST00000488337 CCDC196A0A1B0GTZ2 297 aa7.66□□□□□ -1.18
SIK3-212ENST00000488337 BMS1Q14692 1282 aaKnown RBP7.66□□□□□ -1.18
SIK3-212ENST00000488337 SART3Q15020 963 aaKnown RBP7.66□□□□□ -1.18
SIK3-212ENST00000488337 TSHZ1Q6ZSZ6 1077 aa7.66□□□□□ -1.18
SIK3-212ENST00000488337 ZNF513Q8N8E2 541 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms