RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 MAP4K5Q9Y4K4 846 aa10.2□□□□□ -0.78
VPS8-224ENST00000488255 CAPN5O15484 640 aaPredicted RBP10.19□□□□□ -0.78
VPS8-224ENST00000488255 COG6Q9Y2V7 657 aa10.19□□□□□ -0.78
VPS8-224ENST00000488255 RAD21O60216 631 aa10.18□□□□□ -0.78
VPS8-224ENST00000488255 IRF5Q13568 498 aa10.18□□□□□ -0.78
VPS8-224ENST00000488255 CTC1Q2NKJ3 1217 aa10.18□□□□□ -0.78
VPS8-224ENST00000488255 VAC14Q08AM6 782 aa10.17□□□□□ -0.78
VPS8-224ENST00000488255 CCDC116Q8IYX3 515 aa10.17□□□□□ -0.78
VPS8-224ENST00000488255 ZFAND3Q9H8U3 227 aa10.17□□□□□ -0.78
VPS8-224ENST00000488255 CDV3Q9UKY7 258 aaKnown RBP10.17□□□□□ -0.78
VPS8-224ENST00000488255 ZNF330Q9Y3S2 320 aaPredicted RBP10.17□□□□□ -0.78
VPS8-224ENST00000488255 ZIC2O95409 532 aaPredicted RBP10.16□□□□□ -0.78
VPS8-224ENST00000488255 NBPF20Q3BBV1 942 aa10.16□□□□□ -0.78
VPS8-224ENST00000488255 ITPKCQ96DU7 683 aa10.16□□□□□ -0.78
VPS8-224ENST00000488255 TIMP2P16035 220 aa10.15□□□□□ -0.78
VPS8-224ENST00000488255 SMCPP49901 116 aaPredicted RBP10.15□□□□□ -0.78
VPS8-224ENST00000488255 INTS6LQ5JSJ4 861 aaKnown RBP10.15□□□□□ -0.78
VPS8-224ENST00000488255 GIGYF1O75420 1035 aaPredicted RBP10.14□□□□□ -0.79
VPS8-224ENST00000488255 BMP1P13497 986 aa10.14□□□□□ -0.79
VPS8-224ENST00000488255 CRIPAKQ8N1N5 446 aa10.14□□□□□ -0.79
VPS8-224ENST00000488255 PPP1R26Q5T8A7 1209 aaPredicted RBP10.13□□□□□ -0.79
VPS8-224ENST00000488255 CLUAP1Q96AJ1 413 aa10.13□□□□□ -0.79
VPS8-224ENST00000488255 POTECB2RU33 542 aa10.12□□□□□ -0.79
VPS8-224ENST00000488255 KLF16Q9BXK1 252 aaPredicted RBP10.12□□□□□ -0.79
VPS8-224ENST00000488255 ATP13A2Q9NQ11 1180 aa10.12□□□□□ -0.79
VPS8-224ENST00000488255 TMPRSS4Q9NRS4 437 aa10.12□□□□□ -0.79
VPS8-224ENST00000488255 EMILIN1Q9Y6C2 1016 aa10.12□□□□□ -0.79
VPS8-224ENST00000488255 GMPR2Q9P2T1 348 aaKnown RBP10.11□□□□□ -0.79
VPS8-224ENST00000488255 ERVH48-1M5A8F1 160 aa10.1□□□□□ -0.79
VPS8-224ENST00000488255 EIF4G2P78344 907 aaKnown RBP eCLIP10.1□□□□□ -0.79
VPS8-224ENST00000488255 DHX9Q08211 1270 aaKnown RBP10.1□□□□□ -0.79
VPS8-224ENST00000488255 WASHC4Q2M389 1173 aa10.1□□□□□ -0.79
VPS8-224ENST00000488255 ZNF787Q6DD87 383 aa10.1□□□□□ -0.79
VPS8-224ENST00000488255 WWC1Q8IX03 1113 aa10.1□□□□□ -0.79
VPS8-224ENST00000488255 PGPEP1Q9NXJ5 209 aa10.1□□□□□ -0.79
VPS8-224ENST00000488255 ESPNB1AK53 854 aa10.08□□□□□ -0.8
VPS8-224ENST00000488255 CBLBQ13191 982 aa10.08□□□□□ -0.8
VPS8-224ENST00000488255 C6orf118Q5T5N4 469 aa10.08□□□□□ -0.8
VPS8-224ENST00000488255 TRIM46Q7Z4K8 759 aa10.08□□□□□ -0.8
VPS8-224ENST00000488255 MCCD1P59942 119 aaPredicted RBP10.07□□□□□ -0.8
VPS8-224ENST00000488255 ZNF592Q92610 1267 aa10.07□□□□□ -0.8
VPS8-224ENST00000488255 CEP126Q9P2H0 1117 aa10.07□□□□□ -0.8
VPS8-224ENST00000488255 C11orf95C9JLR9 678 aaPredicted RBP10.06□□□□□ -0.8
VPS8-224ENST00000488255 SEMA3FQ13275 785 aa10.06□□□□□ -0.8
VPS8-224ENST00000488255 MRPL14Q6P1L8 145 aaKnown RBP10.06□□□□□ -0.8
VPS8-224ENST00000488255 ZNF784Q8NCA9 323 aaPredicted RBP10.06□□□□□ -0.8
VPS8-224ENST00000488255 PURBQ96QR8 312 aaKnown RBP10.06□□□□□ -0.8
VPS8-224ENST00000488255 CYLDQ9NQC7 956 aa10.06□□□□□ -0.8
VPS8-224ENST00000488255 SCARF1Q14162 830 aa10.05□□□□□ -0.8
VPS8-224ENST00000488255 PCDHB11Q9Y5F2 797 aa10.05□□□□□ -0.8
VPS8-224ENST00000488255 GTF3C3Q9Y5Q9 886 aa10.05□□□□□ -0.8
VPS8-224ENST00000488255 POM121CA8CG34 1229 aa10.04□□□□□ -0.8
VPS8-224ENST00000488255 UPP2O95045 317 aa10.04□□□□□ -0.8
VPS8-224ENST00000488255 RNF20Q5VTR2 975 aa10.04□□□□□ -0.8
VPS8-224ENST00000488255 SEPT12Q8IYM1 358 aa10.04□□□□□ -0.8
VPS8-224ENST00000488255 AGBL1Q96MI9 1066 aa10.04□□□□□ -0.8
VPS8-224ENST00000488255 ZFP42Q96MM3 310 aa10.04□□□□□ -0.8
VPS8-224ENST00000488255 BMP2P12643 396 aa10.03□□□□□ -0.8
VPS8-224ENST00000488255 SLFNL1Q499Z3 407 aa10.03□□□□□ -0.8
VPS8-224ENST00000488255 MEIOBQ8N635 442 aa10.03□□□□□ -0.8
VPS8-224ENST00000488255 ADD1P35611 737 aaKnown RBP10.02□□□□□ -0.81
VPS8-224ENST00000488255 RELBQ01201 579 aa10.02□□□□□ -0.81
VPS8-224ENST00000488255 PROSER2Q86WR7 435 aaPredicted RBP10.02□□□□□ -0.81
VPS8-224ENST00000488255 SNRPBP14678 240 aaKnown RBP10.01□□□□□ -0.81
VPS8-224ENST00000488255 RNF135Q8IUD6 432 aa10.01□□□□□ -0.81
VPS8-224ENST00000488255 LINC00528Q8N1L1 170 aa10.01□□□□□ -0.81
VPS8-224ENST00000488255 SENP2Q9HC62 589 aa10.01□□□□□ -0.81
VPS8-224ENST00000488255 TSGA10IPQ3SY00 556 aa10□□□□□ -0.81
VPS8-224ENST00000488255 CCDC85AQ96PX6 553 aaPredicted RBP10□□□□□ -0.81
VPS8-224ENST00000488255 ESF1Q9H501 851 aaKnown RBP10□□□□□ -0.81
VPS8-224ENST00000488255 LILRA1O75019 489 aa9.99□□□□□ -0.81
VPS8-224ENST00000488255 Q6ZVU0 165 aa9.99□□□□□ -0.81
VPS8-224ENST00000488255 TSEN34Q9BSV6 310 aaKnown RBP9.99□□□□□ -0.81
VPS8-224ENST00000488255 CDCA7Q9BWT1 371 aaPredicted RBP9.99□□□□□ -0.81
VPS8-224ENST00000488255 ZNF395Q9H8N7 513 aaPredicted RBP9.99□□□□□ -0.81
VPS8-224ENST00000488255 SOX11P35716 441 aa9.98□□□□□ -0.81
VPS8-224ENST00000488255 SCTRP47872 440 aa9.98□□□□□ -0.81
VPS8-224ENST00000488255 TRIM47Q96LD4 638 aa9.98□□□□□ -0.81
VPS8-224ENST00000488255 SOBPA7XYQ1 873 aa9.97□□□□□ -0.81
VPS8-224ENST00000488255 OXLD1Q5BKU9 147 aa9.97□□□□□ -0.81
VPS8-224ENST00000488255 HDGFL1Q5TGJ6 251 aa9.97□□□□□ -0.81
VPS8-224ENST00000488255 KIFC2Q96AC6 838 aa9.97□□□□□ -0.81
VPS8-224ENST00000488255 DOLKQ9UPQ8 538 aa9.97□□□□□ -0.81
VPS8-224ENST00000488255 PIK3CDO00329 1044 aa9.96□□□□□ -0.82
VPS8-224ENST00000488255 ADH1AP07327 375 aa9.96□□□□□ -0.82
VPS8-224ENST00000488255 CC2D2BQ6DHV5 1058 aa9.96□□□□□ -0.82
VPS8-224ENST00000488255 ALG2Q9H553 416 aa9.96□□□□□ -0.82
VPS8-224ENST00000488255 A6NJR5 290 aa9.95□□□□□ -0.82
VPS8-224ENST00000488255 PHTF2Q8N3S3 785 aa9.95□□□□□ -0.82
VPS8-224ENST00000488255 FNBP4Q8N3X1 1017 aaPredicted RBP9.95□□□□□ -0.82
VPS8-224ENST00000488255 ADAMTS19Q8TE59 1207 aa9.95□□□□□ -0.82
VPS8-224ENST00000488255 ERVK-9P63128 1117 aa9.94□□□□□ -0.82
VPS8-224ENST00000488255 CCDC125Q86Z20 511 aa9.94□□□□□ -0.82
VPS8-224ENST00000488255 INSM2Q96T92 566 aaPredicted RBP9.94□□□□□ -0.82
VPS8-224ENST00000488255 FIGNL2A6NMB9 653 aa9.93□□□□□ -0.82
VPS8-224ENST00000488255 ATP5J2-PTCD1G3V325 749 aa9.93□□□□□ -0.82
VPS8-224ENST00000488255 MAN1A2O60476 641 aa9.93□□□□□ -0.82
VPS8-224ENST00000488255 MYCP01106 439 aaPredicted RBP9.93□□□□□ -0.82
VPS8-224ENST00000488255 SKIP12755 728 aa9.93□□□□□ -0.82
VPS8-224ENST00000488255 PTGIRP43119 386 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms