RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 GAS2L2Q8NHY3 880 aa20.39■□□□□ 0.85
GCOM1-210ENST00000488175 SSFA2P28290 1259 aa20.38■□□□□ 0.85
GCOM1-210ENST00000488175 MED14O60244 1454 aa20.38■□□□□ 0.85
GCOM1-210ENST00000488175 FAM135BQ49AJ0 1406 aa20.38■□□□□ 0.85
GCOM1-210ENST00000488175 WAPLQ7Z5K2 1190 aa20.38■□□□□ 0.85
GCOM1-210ENST00000488175 ARHGAP45Q92619 1136 aa20.38■□□□□ 0.85
GCOM1-210ENST00000488175 ERBB4Q15303 1308 aa20.37■□□□□ 0.85
GCOM1-210ENST00000488175 FBXO31Q5XUX0 539 aaPredicted RBP20.37■□□□□ 0.85
GCOM1-210ENST00000488175 C8orf58Q8NAV2 365 aa20.37■□□□□ 0.85
GCOM1-210ENST00000488175 PIK3C2BO00750 1634 aa20.37■□□□□ 0.85
GCOM1-210ENST00000488175 TWISTNBQ3B726 338 aaPredicted RBP20.37■□□□□ 0.85
GCOM1-210ENST00000488175 GNAI1P63096 354 aa20.36■□□□□ 0.85
GCOM1-210ENST00000488175 FAM83GA6ND36 823 aa20.36■□□□□ 0.85
GCOM1-210ENST00000488175 ESPNB1AK53 854 aa20.36■□□□□ 0.85
GCOM1-210ENST00000488175 CHMP4BQ9H444 224 aaKnown RBP20.36■□□□□ 0.85
GCOM1-210ENST00000488175 ZFYVE9O95405 1425 aa20.36■□□□□ 0.85
GCOM1-210ENST00000488175 GSPT1P15170 499 aaKnown RBP20.35■□□□□ 0.85
GCOM1-210ENST00000488175 IFT57Q9NWB7 429 aa20.35■□□□□ 0.85
GCOM1-210ENST00000488175 ZRANB1Q9UGI0 708 aa20.35■□□□□ 0.85
GCOM1-210ENST00000488175 DCTN1Q14203 1278 aa20.34■□□□□ 0.85
GCOM1-210ENST00000488175 ISY1Q9ULR0 285 aaKnown RBP20.34■□□□□ 0.85
GCOM1-210ENST00000488175 ABCC4O15439 1325 aa20.34■□□□□ 0.85
GCOM1-210ENST00000488175 CDC45O75419 566 aa20.34■□□□□ 0.85
GCOM1-210ENST00000488175 C16orf71Q8IYS4 520 aaPredicted RBP20.34■□□□□ 0.85
GCOM1-210ENST00000488175 SKOR2Q2VWA4 1001 aaPredicted RBP20.33■□□□□ 0.85
GCOM1-210ENST00000488175 TRIM44Q96DX7 344 aaPredicted RBP20.33■□□□□ 0.85
GCOM1-210ENST00000488175 PIK3R4Q99570 1358 aa20.33■□□□□ 0.85
GCOM1-210ENST00000488175 PTCH1Q13635 1447 aa20.33■□□□□ 0.85
GCOM1-210ENST00000488175 CFAP74Q9C0B2 1584 aa20.33■□□□□ 0.84
GCOM1-210ENST00000488175 ZNF853P0CG23 659 aa20.33■□□□□ 0.84
GCOM1-210ENST00000488175 CALD1Q05682 793 aaKnown RBP20.33■□□□□ 0.84
GCOM1-210ENST00000488175 IL13P35225 146 aa20.32■□□□□ 0.84
GCOM1-210ENST00000488175 STAG3Q9UJ98 1225 aa20.32■□□□□ 0.84
GCOM1-210ENST00000488175 NME9Q86XW9 330 aa20.32■□□□□ 0.84
GCOM1-210ENST00000488175 PLEKHM2Q8IWE5 1019 aa20.32■□□□□ 0.84
GCOM1-210ENST00000488175 ARHGAP31Q2M1Z3 1444 aa20.31■□□□□ 0.84
GCOM1-210ENST00000488175 ARHGEF40Q8TER5 1519 aa20.3■□□□□ 0.84
GCOM1-210ENST00000488175 CFAP44Q96MT7 982 aa20.3■□□□□ 0.84
GCOM1-210ENST00000488175 RRS1Q15050 365 aaKnown RBP20.29■□□□□ 0.84
GCOM1-210ENST00000488175 APBB1O00213 710 aa20.29■□□□□ 0.84
GCOM1-210ENST00000488175 OTUD7AQ8TE49 926 aaPredicted RBP20.29■□□□□ 0.84
GCOM1-210ENST00000488175 API5Q9BZZ5 524 aaKnown RBP20.29■□□□□ 0.84
GCOM1-210ENST00000488175 DDX49Q9Y6V7 483 aaKnown RBP20.29■□□□□ 0.84
GCOM1-210ENST00000488175 BAG4O95429 457 aaKnown RBP20.28■□□□□ 0.84
GCOM1-210ENST00000488175 ANKRD26Q9UPS8 1709 aa20.27■□□□□ 0.84
GCOM1-210ENST00000488175 YEATS2Q9ULM3 1422 aa20.27■□□□□ 0.84
GCOM1-210ENST00000488175 GOLGA6L22H0YM25 854 aa20.27■□□□□ 0.84
GCOM1-210ENST00000488175 KRT24Q2M2I5 525 aa20.27■□□□□ 0.84
GCOM1-210ENST00000488175 DCTPP1Q9H773 170 aa20.27■□□□□ 0.84
GCOM1-210ENST00000488175 NCKAP5LQ9HCH0 1330 aa20.26■□□□□ 0.83
GCOM1-210ENST00000488175 PTMSP20962 102 aa20.26■□□□□ 0.83
GCOM1-210ENST00000488175 TTC22Q5TAA0 569 aa20.25■□□□□ 0.83
GCOM1-210ENST00000488175 CDC42BPGQ6DT37 1551 aa20.25■□□□□ 0.83
GCOM1-210ENST00000488175 PKP1Q13835 747 aa20.25■□□□□ 0.83
GCOM1-210ENST00000488175 MCTP1Q6DN14 999 aa20.24■□□□□ 0.83
GCOM1-210ENST00000488175 DIP2CQ9Y2E4 1556 aa20.24■□□□□ 0.83
GCOM1-210ENST00000488175 SMARCA5O60264 1052 aaPredicted RBP20.24■□□□□ 0.83
GCOM1-210ENST00000488175 NCLP19338 710 aaKnown RBP20.24■□□□□ 0.83
GCOM1-210ENST00000488175 USP26Q9BXU7 913 aa20.24■□□□□ 0.83
GCOM1-210ENST00000488175 NASPP49321 788 aaPredicted RBP20.23■□□□□ 0.83
GCOM1-210ENST00000488175 RABEP1Q15276 862 aa20.23■□□□□ 0.83
GCOM1-210ENST00000488175 MYO5BQ9ULV0 1848 aa20.23■□□□□ 0.83
GCOM1-210ENST00000488175 KLHL40Q2TBA0 621 aa20.23■□□□□ 0.83
GCOM1-210ENST00000488175 TMEM131LA2VDJ0 1609 aa20.23■□□□□ 0.83
GCOM1-210ENST00000488175 ALKQ9UM73 1620 aa20.23■□□□□ 0.83
GCOM1-210ENST00000488175 LMOD3Q0VAK6 560 aa20.22■□□□□ 0.83
GCOM1-210ENST00000488175 CLTCQ00610 1675 aaKnown RBP20.22■□□□□ 0.83
GCOM1-210ENST00000488175 CLEC17AQ6ZS10 378 aa20.22■□□□□ 0.83
GCOM1-210ENST00000488175 SDSP20132 328 aa20.21■□□□□ 0.83
GCOM1-210ENST00000488175 AEBP1Q8IUX7 1158 aa20.21■□□□□ 0.83
GCOM1-210ENST00000488175 RIMS2Q9UQ26 1411 aa20.2■□□□□ 0.82
GCOM1-210ENST00000488175 ANKRD44Q8N8A2 993 aa20.2■□□□□ 0.82
GCOM1-210ENST00000488175 COG3Q96JB2 828 aa20.2■□□□□ 0.82
GCOM1-210ENST00000488175 INTS3Q68E01 1043 aaKnown RBP20.2■□□□□ 0.82
GCOM1-210ENST00000488175 CAVIN1Q6NZI2 390 aaKnown RBP20.2■□□□□ 0.82
GCOM1-210ENST00000488175 ZGPATQ8N5A5 531 aaKnown RBP20.19■□□□□ 0.82
GCOM1-210ENST00000488175 KIF20BQ96Q89 1820 aa20.19■□□□□ 0.82
GCOM1-210ENST00000488175 CEP85Q6P2H3 762 aa20.19■□□□□ 0.82
GCOM1-210ENST00000488175 CCDC173Q0VFZ6 552 aa20.18■□□□□ 0.82
GCOM1-210ENST00000488175 WASLO00401 505 aaPredicted RBP20.18■□□□□ 0.82
GCOM1-210ENST00000488175 MCM10Q7L590 875 aa20.18■□□□□ 0.82
GCOM1-210ENST00000488175 NEO1Q92859 1461 aa20.17■□□□□ 0.82
GCOM1-210ENST00000488175 NUCB2P80303 420 aa20.17■□□□□ 0.82
GCOM1-210ENST00000488175 CHAMP1Q96JM3 812 aa20.17■□□□□ 0.82
GCOM1-210ENST00000488175 MEIS3Q99687 375 aa20.17■□□□□ 0.82
GCOM1-210ENST00000488175 ATP7BP35670 1465 aa20.17■□□□□ 0.82
GCOM1-210ENST00000488175 HSP90AA2PQ14568 343 aaPredicted RBP20.17■□□□□ 0.82
GCOM1-210ENST00000488175 TXNDC2Q86VQ3 553 aa20.17■□□□□ 0.82
GCOM1-210ENST00000488175 LMBRD1Q9NUN5 540 aa20.17■□□□□ 0.82
GCOM1-210ENST00000488175 SULT6B1Q6IMI4 303 aa20.16■□□□□ 0.82
GCOM1-210ENST00000488175 ANP32BQ92688 251 aaKnown RBP20.16■□□□□ 0.82
GCOM1-210ENST00000488175 PPP1R9BQ96SB3 815 aa20.16■□□□□ 0.82
GCOM1-210ENST00000488175 MAP2P11137 1827 aaKnown RBP20.16■□□□□ 0.82
GCOM1-210ENST00000488175 NUDT16Q96DE0 195 aaKnown RBP20.16■□□□□ 0.82
GCOM1-210ENST00000488175 CYP2E1P05181 493 aaPredicted RBP20.15■□□□□ 0.82
GCOM1-210ENST00000488175 RPAP2Q8IXW5 612 aaPredicted RBP20.15■□□□□ 0.82
GCOM1-210ENST00000488175 EDC4Q6P2E9 1401 aaKnown RBP20.15■□□□□ 0.82
GCOM1-210ENST00000488175 KNDC1Q76NI1 1749 aa20.15■□□□□ 0.82
GCOM1-210ENST00000488175 PRPF40AO75400 957 aaKnown RBP20.15■□□□□ 0.82
GCOM1-210ENST00000488175 ZSCAN23Q3MJ62 389 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms