RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
HLA-DQB1-209ENST00000487676 POLR3AO14802 1390 aaPredicted RBP18.25■□□□□ 0.51
HLA-DQB1-209ENST00000487676 DMTNQ08495 405 aa18.25■□□□□ 0.51
HLA-DQB1-209ENST00000487676 NUP160Q12769 1436 aa18.25■□□□□ 0.51
HLA-DQB1-209ENST00000487676 MAP3K11Q16584 847 aa18.25■□□□□ 0.51
HLA-DQB1-209ENST00000487676 KRT222Q8N1A0 295 aa18.25■□□□□ 0.51
HLA-DQB1-209ENST00000487676 PIBF1Q8WXW3 757 aa18.25■□□□□ 0.51
HLA-DQB1-209ENST00000487676 TAOK2Q9UL54 1235 aa18.25■□□□□ 0.51
HLA-DQB1-209ENST00000487676 LMBRD1Q9NUN5 540 aa18.25■□□□□ 0.51
HLA-DQB1-209ENST00000487676 IBTKQ9P2D0 1353 aaPredicted RBP18.24■□□□□ 0.51
HLA-DQB1-209ENST00000487676 CCDC141Q6ZP82 1450 aa18.24■□□□□ 0.51
HLA-DQB1-209ENST00000487676 NUTM2DQ5VT03 806 aaPredicted RBP18.24■□□□□ 0.51
HLA-DQB1-209ENST00000487676 NAT10Q9H0A0 1025 aaKnown RBP18.24■□□□□ 0.51
HLA-DQB1-209ENST00000487676 OGFRQ9NZT2 677 aa18.24■□□□□ 0.51
HLA-DQB1-209ENST00000487676 KDM5BQ9UGL1 1544 aa18.24■□□□□ 0.51
HLA-DQB1-209ENST00000487676 ZBTB40Q9NUA8 1239 aa18.24■□□□□ 0.51
HLA-DQB1-209ENST00000487676 PTPN14Q15678 1187 aa18.24■□□□□ 0.51
HLA-DQB1-209ENST00000487676 TTC22Q5TAA0 569 aa18.24■□□□□ 0.51
HLA-DQB1-209ENST00000487676 PAXBP1Q9Y5B6 917 aa18.24■□□□□ 0.51
HLA-DQB1-209ENST00000487676 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
HLA-DQB1-209ENST00000487676 PTPRGP23470 1445 aa18.24■□□□□ 0.51
HLA-DQB1-209ENST00000487676 KDM5CP41229 1560 aa18.23■□□□□ 0.51
HLA-DQB1-209ENST00000487676 KIF2AO00139 706 aaPredicted RBP18.23■□□□□ 0.51
HLA-DQB1-209ENST00000487676 IGSF3O75054 1194 aa18.23■□□□□ 0.51
HLA-DQB1-209ENST00000487676 AK7Q96M32 723 aa18.23■□□□□ 0.51
HLA-DQB1-209ENST00000487676 CABP2Q9NPB3 220 aa18.23■□□□□ 0.51
HLA-DQB1-209ENST00000487676 TMX3Q96JJ7 454 aa18.22■□□□□ 0.51
HLA-DQB1-209ENST00000487676 UPF3BQ9BZI7 483 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB1-209ENST00000487676 IL16Q14005 1332 aa18.22■□□□□ 0.51
HLA-DQB1-209ENST00000487676 NPC1L1Q9UHC9 1359 aa18.22■□□□□ 0.51
HLA-DQB1-209ENST00000487676 SOX12O15370 315 aa18.22■□□□□ 0.51
HLA-DQB1-209ENST00000487676 CTTNBP2Q8WZ74 1663 aa18.21■□□□□ 0.51
HLA-DQB1-209ENST00000487676 DNAJC2Q99543 621 aaKnown RBP18.21■□□□□ 0.51
HLA-DQB1-209ENST00000487676 CCP110O43303 1012 aa18.21■□□□□ 0.51
HLA-DQB1-209ENST00000487676 UBE2HP62256 183 aa18.21■□□□□ 0.51
HLA-DQB1-209ENST00000487676 SETQ01105 290 aaPredicted RBP18.21■□□□□ 0.51
HLA-DQB1-209ENST00000487676 TMEM132EQ6IEE7 984 aa18.21■□□□□ 0.51
HLA-DQB1-209ENST00000487676 KIF18AQ8NI77 898 aa18.21■□□□□ 0.51
HLA-DQB1-209ENST00000487676 ZGPATQ8N5A5 531 aaKnown RBP18.21■□□□□ 0.5
HLA-DQB1-209ENST00000487676 FCHSD2O94868 740 aa18.2■□□□□ 0.5
HLA-DQB1-209ENST00000487676 GNAI3P08754 354 aa18.2■□□□□ 0.5
HLA-DQB1-209ENST00000487676 DHX8Q14562 1220 aaKnown RBP18.2■□□□□ 0.5
HLA-DQB1-209ENST00000487676 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
HLA-DQB1-209ENST00000487676 CHMP4CQ96CF2 233 aa18.2■□□□□ 0.5
HLA-DQB1-209ENST00000487676 MINK1Q8N4C8 1332 aaPredicted RBP18.2■□□□□ 0.5
HLA-DQB1-209ENST00000487676 PDIA4P13667 645 aaKnown RBP18.2■□□□□ 0.5
HLA-DQB1-209ENST00000487676 GORABQ5T7V8 394 aa18.2■□□□□ 0.5
HLA-DQB1-209ENST00000487676 MX1P20591 662 aa18.19■□□□□ 0.5
HLA-DQB1-209ENST00000487676 GPATCH8Q9UKJ3 1502 aaKnown RBP18.19■□□□□ 0.5
HLA-DQB1-209ENST00000487676 FAM177BA6PVY3 158 aa18.19■□□□□ 0.5
HLA-DQB1-209ENST00000487676 LEKR1Q6ZMV7 388 aa18.19■□□□□ 0.5
HLA-DQB1-209ENST00000487676 CNTROBQ8N137 903 aa18.19■□□□□ 0.5
HLA-DQB1-209ENST00000487676 LRRCC1Q9C099 1032 aa18.19■□□□□ 0.5
HLA-DQB1-209ENST00000487676 HSP90B2PQ58FF3 399 aa18.19■□□□□ 0.5
HLA-DQB1-209ENST00000487676 DNMT1P26358 1616 aaKnown RBP18.19■□□□□ 0.5
HLA-DQB1-209ENST00000487676 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.19■□□□□ 0.5
HLA-DQB1-209ENST00000487676 FKBP5Q13451 457 aaPredicted RBP18.19■□□□□ 0.5
HLA-DQB1-209ENST00000487676 SRCIN1Q9C0H9 1055 aa18.18■□□□□ 0.5
HLA-DQB1-209ENST00000487676 GNAI2P04899 355 aa18.18■□□□□ 0.5
HLA-DQB1-209ENST00000487676 FILIP1Q7Z7B0 1213 aa18.18■□□□□ 0.5
HLA-DQB1-209ENST00000487676 GABPB1Q06547 395 aaPredicted RBP18.18■□□□□ 0.5
HLA-DQB1-209ENST00000487676 LARP1BQ659C4 914 aaKnown RBP18.18■□□□□ 0.5
HLA-DQB1-209ENST00000487676 KINO60870 393 aaKnown RBP18.17■□□□□ 0.5
HLA-DQB1-209ENST00000487676 PSMA5P28066 241 aa18.17■□□□□ 0.5
HLA-DQB1-209ENST00000487676 USP48Q86UV5 1035 aa18.17■□□□□ 0.5
HLA-DQB1-209ENST00000487676 TMCO3Q6UWJ1 677 aa18.17■□□□□ 0.5
HLA-DQB1-209ENST00000487676 UBXN4Q92575 508 aa18.17■□□□□ 0.5
HLA-DQB1-209ENST00000487676 ARHGAP45Q92619 1136 aa18.17■□□□□ 0.5
HLA-DQB1-209ENST00000487676 COG3Q96JB2 828 aa18.17■□□□□ 0.5
HLA-DQB1-209ENST00000487676 KDM6BO15054 1643 aa18.17■□□□□ 0.5
HLA-DQB1-209ENST00000487676 KIAA0586Q9BVV6 1533 aa18.17■□□□□ 0.5
HLA-DQB1-209ENST00000487676 NEMFO60524 1076 aa18.17■□□□□ 0.5
HLA-DQB1-209ENST00000487676 ZSCAN31Q96LW9 406 aaPredicted RBP18.17■□□□□ 0.5
HLA-DQB1-209ENST00000487676 SDF4Q9BRK5 362 aa18.17■□□□□ 0.5
HLA-DQB1-209ENST00000487676 ACBD3Q9H3P7 528 aa18.17■□□□□ 0.5
HLA-DQB1-209ENST00000487676 SMARCA5O60264 1052 aaPredicted RBP18.16■□□□□ 0.5
HLA-DQB1-209ENST00000487676 BMS1Q14692 1282 aaKnown RBP18.16■□□□□ 0.5
HLA-DQB1-209ENST00000487676 HSP90AB4PQ58FF6 505 aa18.16■□□□□ 0.5
HLA-DQB1-209ENST00000487676 NOL10Q9BSC4 688 aaKnown RBP18.16■□□□□ 0.5
HLA-DQB1-209ENST00000487676 TMEM63CQ9P1W3 806 aa18.16■□□□□ 0.5
HLA-DQB1-209ENST00000487676 U2AF2P26368 475 aaKnown RBP eCLIP18.16■□□□□ 0.5
HLA-DQB1-209ENST00000487676 TRERF1Q96PN7 1200 aa18.16■□□□□ 0.5
HLA-DQB1-209ENST00000487676 CYP46A1Q9Y6A2 500 aa18.16■□□□□ 0.5
HLA-DQB1-209ENST00000487676 SDSP20132 328 aa18.15■□□□□ 0.5
HLA-DQB1-209ENST00000487676 FBXW7Q969H0 707 aa18.15■□□□□ 0.5
HLA-DQB1-209ENST00000487676 CLIP2Q9UDT6 1046 aa18.15■□□□□ 0.5
HLA-DQB1-209ENST00000487676 KDM4AO75164 1064 aa18.15■□□□□ 0.5
HLA-DQB1-209ENST00000487676 USP26Q9BXU7 913 aa18.15■□□□□ 0.5
HLA-DQB1-209ENST00000487676 ARHGAP5Q13017 1502 aa18.15■□□□□ 0.5
HLA-DQB1-209ENST00000487676 BCL2L12Q9HB09 334 aa18.15■□□□□ 0.5
HLA-DQB1-209ENST00000487676 GIMAP6Q6P9H5 292 aa18.15■□□□□ 0.5
HLA-DQB1-209ENST00000487676 TSC1Q92574 1164 aa18.15■□□□□ 0.5
HLA-DQB1-209ENST00000487676 SPATA32Q96LK8 384 aa18.15■□□□□ 0.5
HLA-DQB1-209ENST00000487676 RIOK3O14730 519 aaKnown RBP18.14■□□□□ 0.49
HLA-DQB1-209ENST00000487676 NFE2L2Q16236 605 aa18.14■□□□□ 0.49
HLA-DQB1-209ENST00000487676 CCDC34Q96HJ3 373 aa18.14■□□□□ 0.49
HLA-DQB1-209ENST00000487676 SMTNL1A8MU46 457 aa18.14■□□□□ 0.49
HLA-DQB1-209ENST00000487676 SMC2O95347 1197 aa18.14■□□□□ 0.49
HLA-DQB1-209ENST00000487676 CEP135Q66GS9 1140 aa18.14■□□□□ 0.49
HLA-DQB1-209ENST00000487676 CAMK4Q16566 473 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms