RNA–Protein interactions for RNA: ENST00000487547.1

USP34-216, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 612 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-216ENST00000487547 SOX11P35716 441 aa12.49□□□□□ -0.41
USP34-216ENST00000487547 ERICH6Q7L0X2 663 aa12.49□□□□□ -0.41
USP34-216ENST00000487547 CCDC125Q86Z20 511 aa12.49□□□□□ -0.41
USP34-216ENST00000487547 POM121Q96HA1 1249 aa12.49□□□□□ -0.41
USP34-216ENST00000487547 PCDHB9Q9Y5E1 797 aa12.49□□□□□ -0.41
USP34-216ENST00000487547 TLL2Q9Y6L7 1015 aa12.49□□□□□ -0.41
USP34-216ENST00000487547 J3QL48 77 aa12.48□□□□□ -0.41
USP34-216ENST00000487547 ST8SIA5O15466 376 aa12.48□□□□□ -0.41
USP34-216ENST00000487547 AAASQ9NRG9 546 aa12.48□□□□□ -0.41
USP34-216ENST00000487547 GRM5P41594 1212 aa12.46□□□□□ -0.41
USP34-216ENST00000487547 ZNF787Q6DD87 383 aa12.46□□□□□ -0.41
USP34-216ENST00000487547 KCTD15Q96SI1 283 aaPredicted RBP12.46□□□□□ -0.41
USP34-216ENST00000487547 DHX9Q08211 1270 aaKnown RBP12.44□□□□□ -0.42
USP34-216ENST00000487547 VAC14Q08AM6 782 aa12.44□□□□□ -0.42
USP34-216ENST00000487547 RNF20Q5VTR2 975 aa12.44□□□□□ -0.42
USP34-216ENST00000487547 PROSER2Q86WR7 435 aaPredicted RBP12.44□□□□□ -0.42
USP34-216ENST00000487547 SEPT12Q8IYM1 358 aa12.44□□□□□ -0.42
USP34-216ENST00000487547 CLUAP1Q96AJ1 413 aa12.44□□□□□ -0.42
USP34-216ENST00000487547 SMCPP49901 116 aaPredicted RBP12.43□□□□□ -0.42
USP34-216ENST00000487547 NNTQ13423 1086 aa12.43□□□□□ -0.42
USP34-216ENST00000487547 CTC1Q2NKJ3 1217 aa12.43□□□□□ -0.42
USP34-216ENST00000487547 SEMA3FQ13275 785 aa12.42□□□□□ -0.42
USP34-216ENST00000487547 FSHRP23945 695 aa12.41□□□□□ -0.42
USP34-216ENST00000487547 CCDC116Q8IYX3 515 aa12.4□□□□□ -0.42
USP34-216ENST00000487547 EMILIN1Q9Y6C2 1016 aa12.4□□□□□ -0.42
USP34-216ENST00000487547 ESPNB1AK53 854 aa12.39□□□□□ -0.43
USP34-216ENST00000487547 POTECB2RU33 542 aa12.39□□□□□ -0.43
USP34-216ENST00000487547 AXIN1O15169 862 aa12.39□□□□□ -0.43
USP34-216ENST00000487547 FNBP4Q8N3X1 1017 aaPredicted RBP12.39□□□□□ -0.43
USP34-216ENST00000487547 HPS1Q92902 700 aa12.39□□□□□ -0.43
USP34-216ENST00000487547 ZMYND15Q9H091 742 aa12.39□□□□□ -0.43
USP34-216ENST00000487547 PGPEP1Q9NXJ5 209 aa12.38□□□□□ -0.43
USP34-216ENST00000487547 CEP126Q9P2H0 1117 aa12.38□□□□□ -0.43
USP34-216ENST00000487547 DACH1Q9UI36 760 aa12.38□□□□□ -0.43
USP34-216ENST00000487547 INTS6LQ5JSJ4 861 aaKnown RBP12.36□□□□□ -0.43
USP34-216ENST00000487547 GIGYF1O75420 1035 aaPredicted RBP12.35□□□□□ -0.43
USP34-216ENST00000487547 NR3C2P08235 984 aa12.34□□□□□ -0.43
USP34-216ENST00000487547 WDR4P57081 412 aaKnown RBP12.34□□□□□ -0.43
USP34-216ENST00000487547 ALG2Q9H553 416 aa12.34□□□□□ -0.43
USP34-216ENST00000487547 CAPN5O15484 640 aaPredicted RBP12.33□□□□□ -0.44
USP34-216ENST00000487547 TRAK2O60296 914 aa12.33□□□□□ -0.44
USP34-216ENST00000487547 SLFNL1Q499Z3 407 aa12.33□□□□□ -0.44
USP34-216ENST00000487547 PPP1R26Q5T8A7 1209 aaPredicted RBP12.33□□□□□ -0.44
USP34-216ENST00000487547 C14orf37Q86TY3 774 aa12.33□□□□□ -0.44
USP34-216ENST00000487547 KLF16Q9BXK1 252 aaPredicted RBP12.32□□□□□ -0.44
USP34-216ENST00000487547 ZIC2O95409 532 aaPredicted RBP12.31□□□□□ -0.44
USP34-216ENST00000487547 TIMP2P16035 220 aa12.31□□□□□ -0.44
USP34-216ENST00000487547 ERVH48-1M5A8F1 160 aa12.3□□□□□ -0.44
USP34-216ENST00000487547 RAB15P59190 212 aa12.3□□□□□ -0.44
USP34-216ENST00000487547 HDGFL1Q5TGJ6 251 aa12.3□□□□□ -0.44
USP34-216ENST00000487547 ITPKCQ96DU7 683 aa12.29□□□□□ -0.44
USP34-216ENST00000487547 GMPR2Q9P2T1 348 aaKnown RBP12.29□□□□□ -0.44
USP34-216ENST00000487547 RNF135Q8IUD6 432 aa12.28□□□□□ -0.44
USP34-216ENST00000487547 PHTF2Q8N3S3 785 aa12.28□□□□□ -0.44
USP34-216ENST00000487547 ZNF775Q96BV0 537 aaPredicted RBP12.28□□□□□ -0.44
USP34-216ENST00000487547 ESF1Q9H501 851 aaKnown RBP12.28□□□□□ -0.44
USP34-216ENST00000487547 POM121CA8CG34 1229 aa12.27□□□□□ -0.45
USP34-216ENST00000487547 MAP7D1Q3KQU3 841 aa12.27□□□□□ -0.45
USP34-216ENST00000487547 NFATC2IPQ8NCF5 419 aa12.27□□□□□ -0.45
USP34-216ENST00000487547 ATP13A2Q9NQ11 1180 aa12.27□□□□□ -0.45
USP34-216ENST00000487547 UPP2O95045 317 aa12.25□□□□□ -0.45
USP34-216ENST00000487547 SIRT1Q96EB6 747 aa12.25□□□□□ -0.45
USP34-216ENST00000487547 LZTS3O60299 673 aaPredicted RBP12.24□□□□□ -0.45
USP34-216ENST00000487547 GLMNQ92990 594 aa12.24□□□□□ -0.45
USP34-216ENST00000487547 CALR3Q96L12 384 aaKnown RBP12.24□□□□□ -0.45
USP34-216ENST00000487547 ZFAND3Q9H8U3 227 aa12.24□□□□□ -0.45
USP34-216ENST00000487547 CHIC2Q9UKJ5 165 aa12.24□□□□□ -0.45
USP34-216ENST00000487547 PCDHB11Q9Y5F2 797 aa12.24□□□□□ -0.45
USP34-216ENST00000487547 USP4Q13107 963 aa12.23□□□□□ -0.45
USP34-216ENST00000487547 Q6ZVU0 165 aa12.23□□□□□ -0.45
USP34-216ENST00000487547 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
USP34-216ENST00000487547 TMPRSS4Q9NRS4 437 aa12.23□□□□□ -0.45
USP34-216ENST00000487547 DOLKQ9UPQ8 538 aa12.23□□□□□ -0.45
USP34-216ENST00000487547 SCARF1Q14162 830 aa12.22□□□□□ -0.45
USP34-216ENST00000487547 CC2D2BQ6DHV5 1058 aa12.22□□□□□ -0.45
USP34-216ENST00000487547 ZNF777Q9ULD5 760 aaPredicted RBP12.22□□□□□ -0.45
USP34-216ENST00000487547 C11orf95C9JLR9 678 aaPredicted RBP12.21□□□□□ -0.45
USP34-216ENST00000487547 MYCP01106 439 aaPredicted RBP12.21□□□□□ -0.45
USP34-216ENST00000487547 ERVK-9P63128 1117 aa12.21□□□□□ -0.45
USP34-216ENST00000487547 TSEN34Q9BSV6 310 aaKnown RBP12.21□□□□□ -0.45
USP34-216ENST00000487547 MEIOBQ8N635 442 aa12.2□□□□□ -0.46
USP34-216ENST00000487547 PLPP7Q8NBV4 271 aa12.2□□□□□ -0.46
USP34-216ENST00000487547 ADAMTS19Q8TE59 1207 aa12.2□□□□□ -0.46
USP34-216ENST00000487547 CCDC85AQ96PX6 553 aaPredicted RBP12.2□□□□□ -0.46
USP34-216ENST00000487547 SENP2Q9HC62 589 aa12.2□□□□□ -0.46
USP34-216ENST00000487547 LILRA1O75019 489 aa12.19□□□□□ -0.46
USP34-216ENST00000487547 MRPL14Q6P1L8 145 aaKnown RBP12.19□□□□□ -0.46
USP34-216ENST00000487547 TRIM47Q96LD4 638 aa12.19□□□□□ -0.46
USP34-216ENST00000487547 CYLDQ9NQC7 956 aa12.19□□□□□ -0.46
USP34-216ENST00000487547 SKIP12755 728 aa12.18□□□□□ -0.46
USP34-216ENST00000487547 KIFC2Q96AC6 838 aa12.17□□□□□ -0.46
USP34-216ENST00000487547 ADH1AP07327 375 aa12.16□□□□□ -0.46
USP34-216ENST00000487547 CBLBQ13191 982 aa12.16□□□□□ -0.46
USP34-216ENST00000487547 ATP9BO43861 1147 aa12.15□□□□□ -0.46
USP34-216ENST00000487547 SNRPBP14678 240 aaKnown RBP12.15□□□□□ -0.46
USP34-216ENST00000487547 ADD1P35611 737 aaKnown RBP12.15□□□□□ -0.46
USP34-216ENST00000487547 CYP2U1Q7Z449 544 aa12.15□□□□□ -0.46
USP34-216ENST00000487547 TRIM46Q7Z4K8 759 aa12.15□□□□□ -0.46
USP34-216ENST00000487547 LINC00528Q8N1L1 170 aa12.15□□□□□ -0.46
USP34-216ENST00000487547 PIK3CDO00329 1044 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms