RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 XIRP1Q702N8 1843 aaKnown RBP9.48□□□□□ -0.89
CCNB3-206ENST00000487204 IL13P35225 146 aa9.48□□□□□ -0.89
CCNB3-206ENST00000487204 CCDC27Q2M243 656 aa9.48□□□□□ -0.89
CCNB3-206ENST00000487204 USP19O94966 1318 aa9.48□□□□□ -0.89
CCNB3-206ENST00000487204 MAP3K19Q56UN5 1328 aa9.48□□□□□ -0.89
CCNB3-206ENST00000487204 TNS3Q68CZ2 1445 aa9.48□□□□□ -0.89
CCNB3-206ENST00000487204 APAF1O14727 1248 aa9.47□□□□□ -0.89
CCNB3-206ENST00000487204 SLIT3O75094 1523 aa9.46□□□□□ -0.89
CCNB3-206ENST00000487204 TRPM3Q9HCF6 1732 aaPredicted RBP9.46□□□□□ -0.89
CCNB3-206ENST00000487204 GCP02774 474 aa9.46□□□□□ -0.9
CCNB3-206ENST00000487204 GOLGA2Q08379 1002 aa9.46□□□□□ -0.9
CCNB3-206ENST00000487204 LMOD2Q6P5Q4 547 aa9.46□□□□□ -0.9
CCNB3-206ENST00000487204 CCDC146Q8IYE0 955 aa9.46□□□□□ -0.9
CCNB3-206ENST00000487204 TCP11L2Q8N4U5 519 aa9.46□□□□□ -0.9
CCNB3-206ENST00000487204 IP6K1Q92551 441 aa9.46□□□□□ -0.9
CCNB3-206ENST00000487204 SOS2Q07890 1332 aaPredicted RBP9.46□□□□□ -0.9
CCNB3-206ENST00000487204 SPATA31A3Q5VYP0 1347 aa9.46□□□□□ -0.9
CCNB3-206ENST00000487204 PXDNQ92626 1479 aa9.46□□□□□ -0.9
CCNB3-206ENST00000487204 LTBP4Q8N2S1 1624 aa9.45□□□□□ -0.9
CCNB3-206ENST00000487204 FBLN1P23142 703 aa9.45□□□□□ -0.9
CCNB3-206ENST00000487204 HOXC9P31274 260 aa9.45□□□□□ -0.9
CCNB3-206ENST00000487204 CALD1Q05682 793 aaKnown RBP9.45□□□□□ -0.9
CCNB3-206ENST00000487204 LMOD3Q0VAK6 560 aa9.45□□□□□ -0.9
CCNB3-206ENST00000487204 EIF4A2Q14240 407 aaKnown RBP9.45□□□□□ -0.9
CCNB3-206ENST00000487204 NUTM2GQ5VZR2 741 aa9.45□□□□□ -0.9
CCNB3-206ENST00000487204 WDR63Q8IWG1 891 aa9.45□□□□□ -0.9
CCNB3-206ENST00000487204 PLEKHF1Q96S99 279 aa9.45□□□□□ -0.9
CCNB3-206ENST00000487204 RSPH6AQ9H0K4 717 aa9.45□□□□□ -0.9
CCNB3-206ENST00000487204 E9PSI1 815 aa9.44□□□□□ -0.9
CCNB3-206ENST00000487204 SOX12O15370 315 aa9.44□□□□□ -0.9
CCNB3-206ENST00000487204 TOM1O60784 492 aa9.44□□□□□ -0.9
CCNB3-206ENST00000487204 NEFLP07196 543 aa9.44□□□□□ -0.9
CCNB3-206ENST00000487204 XPCQ01831 940 aaPredicted RBP9.44□□□□□ -0.9
CCNB3-206ENST00000487204 HSP90AB2PQ58FF8 381 aa9.44□□□□□ -0.9
CCNB3-206ENST00000487204 ARHGEF25Q86VW2 580 aa9.44□□□□□ -0.9
CCNB3-206ENST00000487204 ZNF521Q96K83 1311 aa9.44□□□□□ -0.9
CCNB3-206ENST00000487204 IQSEC2Q5JU85 1478 aa9.44□□□□□ -0.9
CCNB3-206ENST00000487204 NFAT5O94916 1531 aa9.44□□□□□ -0.9
CCNB3-206ENST00000487204 PHRF1Q9P1Y6 1649 aaKnown RBP9.44□□□□□ -0.9
CCNB3-206ENST00000487204 ALS2Q96Q42 1657 aa9.44□□□□□ -0.9
CCNB3-206ENST00000487204 MED1Q15648 1581 aaPredicted RBP9.43□□□□□ -0.9
CCNB3-206ENST00000487204 ABCC6O95255 1503 aa9.43□□□□□ -0.9
CCNB3-206ENST00000487204 PRKAR2BP31323 418 aa9.43□□□□□ -0.9
CCNB3-206ENST00000487204 TMPOP42166 694 aaKnown RBP9.43□□□□□ -0.9
CCNB3-206ENST00000487204 ZBTB12Q9Y330 459 aaPredicted RBP9.43□□□□□ -0.9
CCNB3-206ENST00000487204 SALL2Q9Y467 1007 aaPredicted RBP9.43□□□□□ -0.9
CCNB3-206ENST00000487204 MARF1Q9Y4F3 1742 aaKnown RBP9.42□□□□□ -0.9
CCNB3-206ENST00000487204 IL16Q14005 1332 aa9.42□□□□□ -0.9
CCNB3-206ENST00000487204 IGSF1Q8N6C5 1336 aa9.42□□□□□ -0.9
CCNB3-206ENST00000487204 WWC1Q8IX03 1113 aa9.42□□□□□ -0.9
CCNB3-206ENST00000487204 LRRC59Q96AG4 307 aaKnown RBP9.42□□□□□ -0.9
CCNB3-206ENST00000487204 CPDO75976 1380 aa9.41□□□□□ -0.9
CCNB3-206ENST00000487204 KDRP35968 1356 aa9.41□□□□□ -0.9
CCNB3-206ENST00000487204 SLFN5Q08AF3 891 aa9.41□□□□□ -0.9
CCNB3-206ENST00000487204 NFE2L2Q16236 605 aa9.41□□□□□ -0.9
CCNB3-206ENST00000487204 SULT6B1Q6IMI4 303 aa9.41□□□□□ -0.9
CCNB3-206ENST00000487204 MYH16Q9H6N6 1097 aa9.41□□□□□ -0.9
CCNB3-206ENST00000487204 PEAK1Q9H792 1746 aa9.41□□□□□ -0.9
CCNB3-206ENST00000487204 PLEKHG2Q9H7P9 1386 aa9.4□□□□□ -0.9
CCNB3-206ENST00000487204 HMOX1P09601 288 aa9.4□□□□□ -0.9
CCNB3-206ENST00000487204 HAP1P54257 671 aaPredicted RBP9.4□□□□□ -0.9
CCNB3-206ENST00000487204 RIPK4P57078 832 aa9.4□□□□□ -0.9
CCNB3-206ENST00000487204 NHSL1Q5SYE7 1610 aa9.4□□□□□ -0.9
CCNB3-206ENST00000487204 AHDC1Q5TGY3 1603 aaPredicted RBP9.39□□□□□ -0.91
CCNB3-206ENST00000487204 CT47B1P0C2W7 299 aaPredicted RBP9.39□□□□□ -0.91
CCNB3-206ENST00000487204 NEUROD2Q15784 382 aa9.39□□□□□ -0.91
CCNB3-206ENST00000487204 ERICH6BQ5W0A0 696 aa9.39□□□□□ -0.91
CCNB3-206ENST00000487204 TRMT2AQ8IZ69 625 aaKnown RBP9.39□□□□□ -0.91
CCNB3-206ENST00000487204 GAS2L2Q8NHY3 880 aa9.39□□□□□ -0.91
CCNB3-206ENST00000487204 DDX17Q92841 729 aaKnown RBP9.39□□□□□ -0.91
CCNB3-206ENST00000487204 EYA1Q99502 592 aa9.39□□□□□ -0.91
CCNB3-206ENST00000487204 GTF3C3Q9Y5Q9 886 aa9.39□□□□□ -0.91
CCNB3-206ENST00000487204 RGPD1P0DJD0 1748 aa9.39□□□□□ -0.91
CCNB3-206ENST00000487204 LTN1O94822 1766 aa9.38□□□□□ -0.91
CCNB3-206ENST00000487204 HTATSF1O43719 755 aaKnown RBP9.38□□□□□ -0.91
CCNB3-206ENST00000487204 DUSP27Q5VZP5 1158 aa9.38□□□□□ -0.91
CCNB3-206ENST00000487204 RRP7AQ9Y3A4 280 aaKnown RBP9.38□□□□□ -0.91
CCNB3-206ENST00000487204 ZBTB7CA1YPR0 619 aa9.37□□□□□ -0.91
CCNB3-206ENST00000487204 ZC3H6P61129 1189 aaKnown RBP9.37□□□□□ -0.91
CCNB3-206ENST00000487204 AMOTQ4VCS5 1084 aa9.37□□□□□ -0.91
CCNB3-206ENST00000487204 ANKRD24Q8TF21 1146 aa9.37□□□□□ -0.91
CCNB3-206ENST00000487204 CDCA7LQ96GN5 454 aa9.37□□□□□ -0.91
CCNB3-206ENST00000487204 RCAN3Q9UKA8 241 aa9.37□□□□□ -0.91
CCNB3-206ENST00000487204 SUPT16HQ9Y5B9 1047 aaKnown RBP9.37□□□□□ -0.91
CCNB3-206ENST00000487204 ROBO1Q9Y6N7 1651 aa9.36□□□□□ -0.91
CCNB3-206ENST00000487204 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.36□□□□□ -0.91
CCNB3-206ENST00000487204 RTF1Q92541 710 aaKnown RBP9.36□□□□□ -0.91
CCNB3-206ENST00000487204 LTV1Q96GA3 475 aaPredicted RBP9.36□□□□□ -0.91
CCNB3-206ENST00000487204 PHACTR3Q96KR7 559 aa9.36□□□□□ -0.91
CCNB3-206ENST00000487204 PRDM11Q9NQV5 511 aa9.36□□□□□ -0.91
CCNB3-206ENST00000487204 TRIM35Q9UPQ4 493 aa9.36□□□□□ -0.91
CCNB3-206ENST00000487204 ERBB3P21860 1342 aa9.35□□□□□ -0.91
CCNB3-206ENST00000487204 SENP3-EIF4A1A0A087X0R7 540 aa9.35□□□□□ -0.91
CCNB3-206ENST00000487204 GNAI1P63096 354 aa9.35□□□□□ -0.91
CCNB3-206ENST00000487204 NCAPD2Q15021 1401 aa9.35□□□□□ -0.91
CCNB3-206ENST00000487204 PLEKHO1Q53GL0 409 aaPredicted RBP9.35□□□□□ -0.91
CCNB3-206ENST00000487204 AEBP1Q8IUX7 1158 aa9.35□□□□□ -0.91
CCNB3-206ENST00000487204 ZNF428Q96B54 188 aa9.35□□□□□ -0.91
CCNB3-206ENST00000487204 IFT57Q9NWB7 429 aa9.35□□□□□ -0.91
CCNB3-206ENST00000487204 KIAA0232Q92628 1395 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms