RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.24□□□□□ -0.93
COL6A4P1-202ENST00000487147 BECN2A8MW95 431 aa9.24□□□□□ -0.93
COL6A4P1-202ENST00000487147 TNNT3P45378 269 aaPredicted RBP9.24□□□□□ -0.93
COL6A4P1-202ENST00000487147 COG3Q96JB2 828 aa9.24□□□□□ -0.93
COL6A4P1-202ENST00000487147 ERBB4Q15303 1308 aa9.23□□□□□ -0.93
COL6A4P1-202ENST00000487147 ZNF445P59923 1031 aa9.23□□□□□ -0.93
COL6A4P1-202ENST00000487147 IL16Q14005 1332 aa9.23□□□□□ -0.93
COL6A4P1-202ENST00000487147 SMARCA5O60264 1052 aaPredicted RBP9.23□□□□□ -0.93
COL6A4P1-202ENST00000487147 PRIMPOLQ96LW4 560 aa9.23□□□□□ -0.93
COL6A4P1-202ENST00000487147 GDPD2Q9HCC8 539 aa9.23□□□□□ -0.93
COL6A4P1-202ENST00000487147 TRIM5Q9C035 493 aa9.22□□□□□ -0.93
COL6A4P1-202ENST00000487147 KIAA0556O60303 1618 aa9.22□□□□□ -0.93
COL6A4P1-202ENST00000487147 PPP4R3BQ5MIZ7 849 aa9.22□□□□□ -0.93
COL6A4P1-202ENST00000487147 UPF3BQ9BZI7 483 aaKnown RBP9.22□□□□□ -0.93
COL6A4P1-202ENST00000487147 FKBP5Q13451 457 aaPredicted RBP9.22□□□□□ -0.93
COL6A4P1-202ENST00000487147 NFE2L2Q16236 605 aa9.22□□□□□ -0.93
COL6A4P1-202ENST00000487147 TTC22Q5TAA0 569 aa9.22□□□□□ -0.93
COL6A4P1-202ENST00000487147 BICD2Q8TD16 824 aa9.22□□□□□ -0.93
COL6A4P1-202ENST00000487147 GPATCH3Q96I76 525 aa9.22□□□□□ -0.93
COL6A4P1-202ENST00000487147 TAOK2Q9UL54 1235 aa9.22□□□□□ -0.93
COL6A4P1-202ENST00000487147 ZKSCAN1P17029 563 aaPredicted RBP9.22□□□□□ -0.93
COL6A4P1-202ENST00000487147 POLR1AO95602 1720 aaPredicted RBP9.21□□□□□ -0.93
COL6A4P1-202ENST00000487147 CCDC192P0DO97 292 aa9.21□□□□□ -0.93
COL6A4P1-202ENST00000487147 TPD52L1Q16890 204 aaPredicted RBP9.21□□□□□ -0.93
COL6A4P1-202ENST00000487147 ZGPATQ8N5A5 531 aaKnown RBP9.21□□□□□ -0.93
COL6A4P1-202ENST00000487147 ZNF830Q96NB3 372 aaPredicted RBP9.21□□□□□ -0.93
COL6A4P1-202ENST00000487147 SMAP1Q8IYB5 467 aaPredicted RBP9.21□□□□□ -0.94
COL6A4P1-202ENST00000487147 RUFY2Q8WXA3 655 aa9.21□□□□□ -0.94
COL6A4P1-202ENST00000487147 ATP10BO94823 1461 aa9.21□□□□□ -0.94
COL6A4P1-202ENST00000487147 ADCY5O95622 1261 aa9.21□□□□□ -0.94
COL6A4P1-202ENST00000487147 NOLC1Q14978 699 aaKnown RBP eCLIP9.21□□□□□ -0.94
COL6A4P1-202ENST00000487147 CCDC183Q5T5S1 534 aa9.21□□□□□ -0.94
COL6A4P1-202ENST00000487147 CCDC94Q9BW85 323 aaPredicted RBP9.21□□□□□ -0.94
COL6A4P1-202ENST00000487147 ADGBQ8N7X0 1667 aa9.2□□□□□ -0.94
COL6A4P1-202ENST00000487147 CHMP4AQ9BY43 222 aa9.2□□□□□ -0.94
COL6A4P1-202ENST00000487147 ZNF608Q9ULD9 1512 aaPredicted RBP9.2□□□□□ -0.94
COL6A4P1-202ENST00000487147 CCDC66A2RUB6 948 aa9.2□□□□□ -0.94
COL6A4P1-202ENST00000487147 HSP90B1P14625 803 aaKnown RBP9.2□□□□□ -0.94
COL6A4P1-202ENST00000487147 NECTIN2Q92692 538 aa9.2□□□□□ -0.94
COL6A4P1-202ENST00000487147 H3BQV1 296 aa9.2□□□□□ -0.94
COL6A4P1-202ENST00000487147 IFFO2Q5TF58 517 aa9.2□□□□□ -0.94
COL6A4P1-202ENST00000487147 CCDC112Q8NEF3 446 aa9.2□□□□□ -0.94
COL6A4P1-202ENST00000487147 TMX3Q96JJ7 454 aa9.2□□□□□ -0.94
COL6A4P1-202ENST00000487147 ABCC2Q92887 1545 aa9.2□□□□□ -0.94
COL6A4P1-202ENST00000487147 SPDYE4A6NLX3 237 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 SLC4A2P04920 1241 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 SDSP20132 328 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 LMBRD1Q9NUN5 540 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 DISP1Q96F81 1524 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 GNAI2P04899 355 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 TPM4P67936 248 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 ARHGAP45Q92619 1136 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 LRRCC1Q9C099 1032 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 TTC12Q9H892 705 aaPredicted RBP9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 ZNF500O60304 480 aaPredicted RBP9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 UVSSAQ2YD98 709 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 TSPYL4Q9UJ04 414 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 WDR7Q9Y4E6 1490 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 GNAI3P08754 354 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 HCLS1P14317 486 aaPredicted RBP9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 PRAM1Q96QH2 718 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 CABP1Q9NZU7 370 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 DNAJC5BQ9UF47 199 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 EXOC6BQ9Y2D4 811 aa9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.19□□□□□ -0.94
COL6A4P1-202ENST00000487147 NSD2O96028 1365 aa9.18□□□□□ -0.94
COL6A4P1-202ENST00000487147 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.18□□□□□ -0.94
COL6A4P1-202ENST00000487147 APPP05067 770 aa9.18□□□□□ -0.94
COL6A4P1-202ENST00000487147 C16orf71Q8IYS4 520 aaPredicted RBP9.18□□□□□ -0.94
COL6A4P1-202ENST00000487147 ADAMTS12P58397 1594 aa9.18□□□□□ -0.94
COL6A4P1-202ENST00000487147 PLEKHM2Q8IWE5 1019 aa9.17□□□□□ -0.94
COL6A4P1-202ENST00000487147 USP26Q9BXU7 913 aa9.17□□□□□ -0.94
COL6A4P1-202ENST00000487147 ZBTB7BO15156 539 aaPredicted RBP9.17□□□□□ -0.94
COL6A4P1-202ENST00000487147 CD2BP2O95400 341 aaKnown RBP9.17□□□□□ -0.94
COL6A4P1-202ENST00000487147 SYCP2Q9BX26 1530 aa9.17□□□□□ -0.94
COL6A4P1-202ENST00000487147 SURF6O75683 361 aaKnown RBP9.17□□□□□ -0.94
COL6A4P1-202ENST00000487147 UBTFL1P0CB47 393 aaPredicted RBP9.17□□□□□ -0.94
COL6A4P1-202ENST00000487147 CCT4P50991 539 aaKnown RBP9.17□□□□□ -0.94
COL6A4P1-202ENST00000487147 CNTROBQ8N137 903 aa9.17□□□□□ -0.94
COL6A4P1-202ENST00000487147 ATAD2Q6PL18 1390 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 NPHP1O15259 732 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 DCTN1Q14203 1278 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 MRPL50Q8N5N7 158 aaKnown RBP9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 TMEM63CQ9P1W3 806 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 KRT85P78386 507 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 SF3A1Q15459 793 aaKnown RBP9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 TEX35Q5T0J7 233 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 TAF3Q5VWG9 929 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 HOMER1Q86YM7 354 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 PLCD3Q8N3E9 789 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 TNMDQ9H2S6 317 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 CEP170Q5SW79 1584 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 NUTM2FA1L443 756 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 PDCP20941 246 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 NUP62CLQ9H1M0 184 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 DCTPP1Q9H773 170 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 MBIPQ9NS73 344 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 HDAC5Q9UQL6 1122 aa9.16□□□□□ -0.94
COL6A4P1-202ENST00000487147 DUOX2Q9NRD8 1548 aa9.15□□□□□ -0.94
COL6A4P1-202ENST00000487147 FAM177BA6PVY3 158 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms