RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 EIF3AQ14152 1382 aaKnown RBP8.22□□□□□ -1.09
CUX1-208ENST00000485792 ATRNO75882 1429 aa8.22□□□□□ -1.09
CUX1-208ENST00000485792 ZNF467Q7Z7K2 595 aaPredicted RBP8.22□□□□□ -1.09
CUX1-208ENST00000485792 CABLES1Q8TDN4 633 aa8.22□□□□□ -1.09
CUX1-208ENST00000485792 CDK19Q9BWU1 502 aa8.22□□□□□ -1.09
CUX1-208ENST00000485792 CABP2Q9NPB3 220 aa8.22□□□□□ -1.09
CUX1-208ENST00000485792 PHF8Q9UPP1 1060 aa8.22□□□□□ -1.09
CUX1-208ENST00000485792 NPHP3Q7Z494 1330 aa8.22□□□□□ -1.09
CUX1-208ENST00000485792 USP47Q96K76 1375 aa8.22□□□□□ -1.09
CUX1-208ENST00000485792 CAMTA1Q9Y6Y1 1673 aa8.21□□□□□ -1.09
CUX1-208ENST00000485792 SHANK3Q9BYB0 1731 aa8.21□□□□□ -1.09
CUX1-208ENST00000485792 RGPD2P0DJD1 1756 aa8.21□□□□□ -1.1
CUX1-208ENST00000485792 NUDT16Q96DE0 195 aaKnown RBP8.21□□□□□ -1.1
CUX1-208ENST00000485792 POGKQ9P215 609 aa8.21□□□□□ -1.1
CUX1-208ENST00000485792 TAOK2Q9UL54 1235 aa8.21□□□□□ -1.1
CUX1-208ENST00000485792 FAM208AQ9UK61 1670 aaKnown RBP8.21□□□□□ -1.1
CUX1-208ENST00000485792 PLEKHG3A1L390 1219 aa8.2□□□□□ -1.1
CUX1-208ENST00000485792 POTEIP0CG38 1075 aa8.2□□□□□ -1.1
CUX1-208ENST00000485792 LRRC37A3O60309 1634 aa8.2□□□□□ -1.1
CUX1-208ENST00000485792 USP19O94966 1318 aa8.2□□□□□ -1.1
CUX1-208ENST00000485792 ACEP12821 1306 aa8.2□□□□□ -1.1
CUX1-208ENST00000485792 A0A1W2PP64 1363 aa8.2□□□□□ -1.1
CUX1-208ENST00000485792 TNS1Q9HBL0 1735 aaKnown RBP8.2□□□□□ -1.1
CUX1-208ENST00000485792 OVOS2A0A0J9YW53 1432 aa8.2□□□□□ -1.1
CUX1-208ENST00000485792 OVOS2Q6IE36 1432 aa8.2□□□□□ -1.1
CUX1-208ENST00000485792 IFNL1Q8IU54 200 aa8.19□□□□□ -1.1
CUX1-208ENST00000485792 AFF2P51816 1311 aa8.19□□□□□ -1.1
CUX1-208ENST00000485792 NUTM2BA6NNL0 878 aaPredicted RBP8.18□□□□□ -1.1
CUX1-208ENST00000485792 NUTM2EB1AL46 878 aaPredicted RBP8.18□□□□□ -1.1
CUX1-208ENST00000485792 KRT28Q7Z3Y7 464 aa8.18□□□□□ -1.1
CUX1-208ENST00000485792 NUTM2AQ8IVF1 878 aaPredicted RBP8.18□□□□□ -1.1
CUX1-208ENST00000485792 HS6ST3Q8IZP7 471 aa8.18□□□□□ -1.1
CUX1-208ENST00000485792 PUS7Q96PZ0 661 aaKnown RBP8.18□□□□□ -1.1
CUX1-208ENST00000485792 PCDHB8Q9UN66 801 aa8.18□□□□□ -1.1
CUX1-208ENST00000485792 BRD4O60885 1362 aaPredicted RBP8.18□□□□□ -1.1
CUX1-208ENST00000485792 ST20-MTHFSA0A0A6YYL1 179 aa8.17□□□□□ -1.1
CUX1-208ENST00000485792 C11orf95C9JLR9 678 aaPredicted RBP8.17□□□□□ -1.1
CUX1-208ENST00000485792 TIE1P35590 1138 aa8.17□□□□□ -1.1
CUX1-208ENST00000485792 ASTLQ6HA08 431 aaPredicted RBP8.17□□□□□ -1.1
CUX1-208ENST00000485792 CARD11Q9BXL7 1154 aa8.17□□□□□ -1.1
CUX1-208ENST00000485792 CDK12Q9NYV4 1490 aaPredicted RBP8.17□□□□□ -1.1
CUX1-208ENST00000485792 ADAMTS2O95450 1211 aa8.16□□□□□ -1.1
CUX1-208ENST00000485792 FNBP4Q8N3X1 1017 aaPredicted RBP8.16□□□□□ -1.1
CUX1-208ENST00000485792 PARP4Q9UKK3 1724 aaKnown RBP8.16□□□□□ -1.1
CUX1-208ENST00000485792 TRPC6Q9Y210 931 aa8.16□□□□□ -1.1
CUX1-208ENST00000485792 COL5A2P05997 1499 aaPredicted RBP8.15□□□□□ -1.1
CUX1-208ENST00000485792 ARHGEF10O15013 1369 aa8.15□□□□□ -1.1
CUX1-208ENST00000485792 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.15□□□□□ -1.1
CUX1-208ENST00000485792 ATMINO43313 823 aaPredicted RBP8.15□□□□□ -1.1
CUX1-208ENST00000485792 PDAP1Q13442 181 aaKnown RBP8.15□□□□□ -1.1
CUX1-208ENST00000485792 ZFP91Q96JP5 570 aaPredicted RBP8.15□□□□□ -1.1
CUX1-208ENST00000485792 BMP2KQ9NSY1 1161 aaPredicted RBP8.15□□□□□ -1.1
CUX1-208ENST00000485792 CABP1Q9NZU7 370 aa8.15□□□□□ -1.1
CUX1-208ENST00000485792 KIAA0232Q92628 1395 aa8.14□□□□□ -1.11
CUX1-208ENST00000485792 EVC2Q86UK5 1308 aa8.14□□□□□ -1.11
CUX1-208ENST00000485792 PSME1Q06323 249 aa8.14□□□□□ -1.11
CUX1-208ENST00000485792 NUTM2GQ5VZR2 741 aa8.14□□□□□ -1.11
CUX1-208ENST00000485792 C8orf37Q96NL8 207 aa8.14□□□□□ -1.11
CUX1-208ENST00000485792 ATAD2Q6PL18 1390 aa8.13□□□□□ -1.11
CUX1-208ENST00000485792 MAP2P11137 1827 aaKnown RBP8.13□□□□□ -1.11
CUX1-208ENST00000485792 SBF2Q86WG5 1849 aa8.13□□□□□ -1.11
CUX1-208ENST00000485792 FAM83GA6ND36 823 aa8.13□□□□□ -1.11
CUX1-208ENST00000485792 STK25O00506 426 aa8.13□□□□□ -1.11
CUX1-208ENST00000485792 SLC12A5Q9H2X9 1139 aa8.13□□□□□ -1.11
CUX1-208ENST00000485792 ABCC6O95255 1503 aa8.13□□□□□ -1.11
CUX1-208ENST00000485792 EDC4Q6P2E9 1401 aaKnown RBP8.12□□□□□ -1.11
CUX1-208ENST00000485792 CPDO75976 1380 aa8.12□□□□□ -1.11
CUX1-208ENST00000485792 USP31Q70CQ4 1352 aa8.12□□□□□ -1.11
CUX1-208ENST00000485792 TTLL13PA6NNM8 815 aa8.12□□□□□ -1.11
CUX1-208ENST00000485792 SLC24A1O60721 1099 aa8.12□□□□□ -1.11
CUX1-208ENST00000485792 PSEN1P49768 467 aa8.12□□□□□ -1.11
CUX1-208ENST00000485792 ATN1P54259 1190 aaPredicted RBP8.12□□□□□ -1.11
CUX1-208ENST00000485792 SRPK2P78362 688 aaKnown RBP8.12□□□□□ -1.11
CUX1-208ENST00000485792 BBXQ8WY36 941 aaPredicted RBP8.12□□□□□ -1.11
CUX1-208ENST00000485792 BCL11BQ9C0K0 894 aaPredicted RBP8.12□□□□□ -1.11
CUX1-208ENST00000485792 DISP2A7MBM2 1401 aa8.12□□□□□ -1.11
CUX1-208ENST00000485792 TTC21BQ7Z4L5 1316 aa8.11□□□□□ -1.11
CUX1-208ENST00000485792 ZNF772Q68DY9 489 aaPredicted RBP8.11□□□□□ -1.11
CUX1-208ENST00000485792 NME9Q86XW9 330 aa8.11□□□□□ -1.11
CUX1-208ENST00000485792 TMEM106CQ9BVX2 250 aa8.11□□□□□ -1.11
CUX1-208ENST00000485792 CARD14Q9BXL6 1004 aa8.11□□□□□ -1.11
CUX1-208ENST00000485792 RGPD1P0DJD0 1748 aa8.11□□□□□ -1.11
CUX1-208ENST00000485792 TOGARAM1Q9Y4F4 1720 aa8.11□□□□□ -1.11
CUX1-208ENST00000485792 ANKRD36BQ8N2N9 1353 aa8.1□□□□□ -1.11
CUX1-208ENST00000485792 NINLQ9Y2I6 1382 aa8.1□□□□□ -1.11
CUX1-208ENST00000485792 SOCS7O14512 581 aa8.1□□□□□ -1.11
CUX1-208ENST00000485792 HSPA5P11021 654 aaKnown RBP8.1□□□□□ -1.11
CUX1-208ENST00000485792 FBLN1P23142 703 aa8.1□□□□□ -1.11
CUX1-208ENST00000485792 CHRNA2Q15822 529 aa8.1□□□□□ -1.11
CUX1-208ENST00000485792 PELP1Q8IZL8 1130 aaKnown RBP8.1□□□□□ -1.11
CUX1-208ENST00000485792 NGDNQ8NEJ9 315 aaKnown RBP8.1□□□□□ -1.11
CUX1-208ENST00000485792 CCER1Q8TC90 406 aaPredicted RBP8.1□□□□□ -1.11
CUX1-208ENST00000485792 SLC39A7Q92504 469 aa8.1□□□□□ -1.11
CUX1-208ENST00000485792 RREB1Q92766 1687 aa8.1□□□□□ -1.11
CUX1-208ENST00000485792 KTN1Q86UP2 1357 aaKnown RBP8.1□□□□□ -1.11
CUX1-208ENST00000485792 AXIN2Q9Y2T1 843 aa8.09□□□□□ -1.11
CUX1-208ENST00000485792 STK24Q9Y6E0 443 aa8.09□□□□□ -1.11
CUX1-208ENST00000485792 NSD3Q9BZ95 1437 aa8.09□□□□□ -1.11
CUX1-208ENST00000485792 NUP188Q5SRE5 1749 aa8.09□□□□□ -1.11
CUX1-208ENST00000485792 ONECUT3O60422 494 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 206.8 ms