RNA–Protein interactions for RNA: ENST00000485556.5

STRC-211, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 4,253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-211ENST00000485556 ATP6V1DQ9Y5K8 247 aa12.14□□□□□ -0.47
STRC-211ENST00000485556 MEX3CQ5U5Q3 659 aaKnown RBP12.13□□□□□ -0.47
STRC-211ENST00000485556 CARD14Q9BXL6 1004 aa12.13□□□□□ -0.47
STRC-211ENST00000485556 ASXL1Q8IXJ9 1541 aa12.13□□□□□ -0.47
STRC-211ENST00000485556 PER1O15534 1290 aaPredicted RBP12.13□□□□□ -0.47
STRC-211ENST00000485556 FSD1Q9BTV5 496 aa12.13□□□□□ -0.47
STRC-211ENST00000485556 NFKBIBQ15653 356 aa12.13□□□□□ -0.47
STRC-211ENST00000485556 CNTROBQ8N137 903 aa12.13□□□□□ -0.47
STRC-211ENST00000485556 RIMS2Q9UQ26 1411 aa12.12□□□□□ -0.47
STRC-211ENST00000485556 LRPPRCP42704 1394 aaKnown RBP12.12□□□□□ -0.47
STRC-211ENST00000485556 LRRCC1Q9C099 1032 aa12.12□□□□□ -0.47
STRC-211ENST00000485556 FAM83GA6ND36 823 aa12.12□□□□□ -0.47
STRC-211ENST00000485556 SRGAP3O43295 1099 aa12.12□□□□□ -0.47
STRC-211ENST00000485556 MCTP1Q6DN14 999 aa12.12□□□□□ -0.47
STRC-211ENST00000485556 VPS37DQ86XT2 251 aa12.12□□□□□ -0.47
STRC-211ENST00000485556 TRIM27P14373 513 aa12.11□□□□□ -0.47
STRC-211ENST00000485556 ALDH1L2Q3SY69 923 aa12.11□□□□□ -0.47
STRC-211ENST00000485556 SIL1Q9H173 461 aa12.11□□□□□ -0.47
STRC-211ENST00000485556 KIAA2012Q0VF49 1180 aa12.11□□□□□ -0.47
STRC-211ENST00000485556 HSP90AB2PQ58FF8 381 aa12.11□□□□□ -0.47
STRC-211ENST00000485556 VPS37CA5D8V6 355 aaPredicted RBP12.11□□□□□ -0.47
STRC-211ENST00000485556 NEK4P51957 841 aa12.11□□□□□ -0.47
STRC-211ENST00000485556 WASHC4Q2M389 1173 aa12.11□□□□□ -0.47
STRC-211ENST00000485556 SKOR2Q2VWA4 1001 aaPredicted RBP12.11□□□□□ -0.47
STRC-211ENST00000485556 CPLX2Q6PUV4 134 aaKnown RBP12.11□□□□□ -0.47
STRC-211ENST00000485556 RPAP2Q8IXW5 612 aaPredicted RBP12.11□□□□□ -0.47
STRC-211ENST00000485556 NUTM2BA6NNL0 878 aaPredicted RBP12.11□□□□□ -0.47
STRC-211ENST00000485556 NUTM2EB1AL46 878 aaPredicted RBP12.11□□□□□ -0.47
STRC-211ENST00000485556 PHF14O94880 888 aa12.11□□□□□ -0.47
STRC-211ENST00000485556 CHAF1AQ13111 956 aaPredicted RBP12.11□□□□□ -0.47
STRC-211ENST00000485556 NUTM2AQ8IVF1 878 aaPredicted RBP12.11□□□□□ -0.47
STRC-211ENST00000485556 IL1RAPL2Q9NP60 686 aa12.11□□□□□ -0.47
STRC-211ENST00000485556 SMC3Q9UQE7 1217 aa12.1□□□□□ -0.47
STRC-211ENST00000485556 EXOC6BQ9Y2D4 811 aa12.1□□□□□ -0.47
STRC-211ENST00000485556 NUCB2P80303 420 aa12.1□□□□□ -0.47
STRC-211ENST00000485556 TAF7Q15545 349 aaPredicted RBP12.1□□□□□ -0.47
STRC-211ENST00000485556 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
STRC-211ENST00000485556 TRDNQ13061 729 aa12.1□□□□□ -0.47
STRC-211ENST00000485556 F6X3S4 739 aa12.09□□□□□ -0.47
STRC-211ENST00000485556 CPLX1O14810 134 aa12.09□□□□□ -0.47
STRC-211ENST00000485556 MPRIPQ6WCQ1 1025 aa12.09□□□□□ -0.47
STRC-211ENST00000485556 DNAJC2Q99543 621 aaKnown RBP12.09□□□□□ -0.47
STRC-211ENST00000485556 TTC21BQ7Z4L5 1316 aa12.09□□□□□ -0.47
STRC-211ENST00000485556 ATP7AQ04656 1500 aa12.09□□□□□ -0.47
STRC-211ENST00000485556 UHRF1BP1Q6BDS2 1440 aa12.09□□□□□ -0.47
STRC-211ENST00000485556 KIF6Q6ZMV9 814 aa12.09□□□□□ -0.47
STRC-211ENST00000485556 SYNE3Q6ZMZ3 975 aa12.09□□□□□ -0.47
STRC-211ENST00000485556 CHMP4CQ96CF2 233 aa12.09□□□□□ -0.47
STRC-211ENST00000485556 ERC1Q8IUD2 1116 aa12.08□□□□□ -0.47
STRC-211ENST00000485556 RASSF8Q8NHQ8 419 aa12.08□□□□□ -0.47
STRC-211ENST00000485556 CCDC34Q96HJ3 373 aa12.08□□□□□ -0.47
STRC-211ENST00000485556 EIF2AK4Q9P2K8 1649 aaKnown RBP12.08□□□□□ -0.48
STRC-211ENST00000485556 PTCD1O75127 700 aaKnown RBP12.08□□□□□ -0.48
STRC-211ENST00000485556 PPIP5K1Q6PFW1 1433 aa12.08□□□□□ -0.48
STRC-211ENST00000485556 AKAP17AQ02040 695 aaKnown RBP12.07□□□□□ -0.48
STRC-211ENST00000485556 MBIPQ9NS73 344 aa12.07□□□□□ -0.48
STRC-211ENST00000485556 POLKQ9UBT6 870 aa12.07□□□□□ -0.48
STRC-211ENST00000485556 KRT28Q7Z3Y7 464 aa12.07□□□□□ -0.48
STRC-211ENST00000485556 NCKAP5LQ9HCH0 1330 aa12.07□□□□□ -0.48
STRC-211ENST00000485556 RABEP1Q15276 862 aa12.07□□□□□ -0.48
STRC-211ENST00000485556 ZMYM3Q14202 1370 aa12.07□□□□□ -0.48
STRC-211ENST00000485556 MBD5Q9P267 1494 aa12.07□□□□□ -0.48
STRC-211ENST00000485556 MAP4K4O95819 1239 aaPredicted RBP12.06□□□□□ -0.48
STRC-211ENST00000485556 AMOTQ4VCS5 1084 aa12.06□□□□□ -0.48
STRC-211ENST00000485556 RALYLQ86SE5 291 aaKnown RBP12.06□□□□□ -0.48
STRC-211ENST00000485556 COL17A1Q9UMD9 1497 aaPredicted RBP12.06□□□□□ -0.48
STRC-211ENST00000485556 PUS7Q96PZ0 661 aaKnown RBP12.06□□□□□ -0.48
STRC-211ENST00000485556 POLR3AO14802 1390 aaPredicted RBP12.06□□□□□ -0.48
STRC-211ENST00000485556 AEBP1Q8IUX7 1158 aa12.06□□□□□ -0.48
STRC-211ENST00000485556 MAST1Q9Y2H9 1570 aa12.05□□□□□ -0.48
STRC-211ENST00000485556 AEBP2Q6ZN18 517 aaPredicted RBP12.05□□□□□ -0.48
STRC-211ENST00000485556 A0A1W2PP64 1363 aa12.05□□□□□ -0.48
STRC-211ENST00000485556 FOSBP53539 338 aa12.05□□□□□ -0.48
STRC-211ENST00000485556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.05□□□□□ -0.48
STRC-211ENST00000485556 NOL10Q9BSC4 688 aaKnown RBP12.05□□□□□ -0.48
STRC-211ENST00000485556 SMARCA5O60264 1052 aaPredicted RBP12.04□□□□□ -0.48
STRC-211ENST00000485556 TPM4P67936 248 aa12.04□□□□□ -0.48
STRC-211ENST00000485556 IL16Q14005 1332 aa12.04□□□□□ -0.48
STRC-211ENST00000485556 PIP4K2BP78356 416 aa12.04□□□□□ -0.48
STRC-211ENST00000485556 AACSQ86V21 672 aa12.04□□□□□ -0.48
STRC-211ENST00000485556 PLEKHH1Q9ULM0 1364 aa12.04□□□□□ -0.48
STRC-211ENST00000485556 ABCA8O94911 1581 aa12.04□□□□□ -0.48
STRC-211ENST00000485556 YTHDC2Q9H6S0 1430 aaKnown RBP12.04□□□□□ -0.48
STRC-211ENST00000485556 NFXL1Q6ZNB6 911 aa12.04□□□□□ -0.48
STRC-211ENST00000485556 PKNOX2Q96KN3 472 aa12.03□□□□□ -0.48
STRC-211ENST00000485556 CNNM1Q9NRU3 951 aa12.03□□□□□ -0.48
STRC-211ENST00000485556 FLIIQ13045 1269 aa12.03□□□□□ -0.48
STRC-211ENST00000485556 BICD2Q8TD16 824 aa12.03□□□□□ -0.48
STRC-211ENST00000485556 TTC21AQ8NDW8 1320 aa12.03□□□□□ -0.48
STRC-211ENST00000485556 TRIM29Q14134 588 aa12.03□□□□□ -0.48
STRC-211ENST00000485556 IGHDP01880 384 aa12.03□□□□□ -0.48
STRC-211ENST00000485556 PSMA5P28066 241 aa12.03□□□□□ -0.48
STRC-211ENST00000485556 EIF4A2Q14240 407 aaKnown RBP12.03□□□□□ -0.48
STRC-211ENST00000485556 CCDC27Q2M243 656 aa12.03□□□□□ -0.48
STRC-211ENST00000485556 CCDC85AQ96PX6 553 aaPredicted RBP12.03□□□□□ -0.48
STRC-211ENST00000485556 PIK3C2GO75747 1445 aa12.02□□□□□ -0.48
STRC-211ENST00000485556 CFAP65Q6ZU64 1925 aaKnown RBP12.02□□□□□ -0.48
STRC-211ENST00000485556 HIP1O00291 1037 aa12.02□□□□□ -0.48
STRC-211ENST00000485556 CHRNA2Q15822 529 aa12.02□□□□□ -0.48
STRC-211ENST00000485556 NUTM1Q86Y26 1132 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms