RNA–Protein interactions for RNA: ENST00000485036.5

TNFRSF25-215, Transcript of TNF receptor superfamily member 25, human

TSL 1 (best)

Gene TNFRSF25, Length 1,726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF25-215	ENST00000485036	RTL1	A6NKG5	1358 aa		33.22	■■■□□ 2.91
TNFRSF25-215	ENST00000485036	HSP90AB2P	Q58FF8	381 aa		33.21	■■■□□ 2.91
TNFRSF25-215	ENST00000485036		E9PSI1	815 aa		33.2	■■■□□ 2.91
TNFRSF25-215	ENST00000485036	PRKAR2B	P31323	418 aa		33.19	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	TMPO	P42166	694 aa	Known RBP	33.19	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	WDR63	Q8IWG1	891 aa		33.19	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	XPC	Q01831	940 aa	Predicted RBP	33.18	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	NEUROD2	Q15784	382 aa		33.18	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.18	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	USP19	O94966	1318 aa		33.18	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	KCNH5	Q8NCM2	988 aa		33.17	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	PXDN	Q92626	1479 aa		33.17	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	RCAN3	Q9UKA8	241 aa		33.17	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	NPHP3	Q7Z494	1330 aa		33.17	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	HMOX1	P09601	288 aa		33.16	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	ARHGEF10	O15013	1369 aa		33.16	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	AMPH	P49418	695 aa		33.16	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	HOXC9	P31274	260 aa		33.14	■■■□□ 2.9
TNFRSF25-215	ENST00000485036	NEFM	P07197	916 aa		33.12	■■■□□ 2.89
TNFRSF25-215	ENST00000485036	TRIM35	Q9UPQ4	493 aa		33.11	■■■□□ 2.89
TNFRSF25-215	ENST00000485036	MED1	Q15648	1581 aa	Predicted RBP	33.1	■■■□□ 2.89
TNFRSF25-215	ENST00000485036	TNS3	Q68CZ2	1445 aa		33.1	■■■□□ 2.89
TNFRSF25-215	ENST00000485036	DLG5	Q8TDM6	1919 aa		33.1	■■■□□ 2.89
TNFRSF25-215	ENST00000485036	ERICH6B	Q5W0A0	696 aa		33.1	■■■□□ 2.89
TNFRSF25-215	ENST00000485036	BRINP3	Q76B58	766 aa		33.1	■■■□□ 2.89
TNFRSF25-215	ENST00000485036	KDR	P35968	1356 aa		33.09	■■■□□ 2.89
TNFRSF25-215	ENST00000485036	CRYBG1	Q9Y4K1	1723 aa		33.08	■■■□□ 2.89
TNFRSF25-215	ENST00000485036	PHACTR3	Q96KR7	559 aa		33.08	■■■□□ 2.89
TNFRSF25-215	ENST00000485036	NFE2L2	Q16236	605 aa		33.08	■■■□□ 2.89
TNFRSF25-215	ENST00000485036	IGSF1	Q8N6C5	1336 aa		33.07	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	RIPK4	P57078	832 aa		33.07	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	GC	P02774	474 aa		33.06	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	SULT6B1	Q6IMI4	303 aa		33.05	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	AEBP1	Q8IUX7	1158 aa		33.05	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	IP6K1	Q92551	441 aa		33.05	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	DDX17	Q92841	729 aa	Known RBP	33.05	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	SLAIN2	Q9P270	581 aa		33.05	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	IRX6	P78412	446 aa	Predicted RBP	33.05	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	IL16	Q14005	1332 aa		33.04	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	RRP1	P56182	461 aa	Known RBP	33.04	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	NHSL1	Q5SYE7	1610 aa		33.03	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	LTBP4	Q8N2S1	1624 aa		33.03	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	LMOD2	Q6P5Q4	547 aa		33.02	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	ARHGEF25	Q86VW2	580 aa		33.02	■■■□□ 2.88
TNFRSF25-215	ENST00000485036	SPATA31A3	Q5VYP0	1347 aa		33.01	■■■□□ 2.87
TNFRSF25-215	ENST00000485036	EYA1	Q99502	592 aa		33	■■■□□ 2.87
TNFRSF25-215	ENST00000485036	MYH16	Q9H6N6	1097 aa		32.98	■■■□□ 2.87
TNFRSF25-215	ENST00000485036	SOS2	Q07890	1332 aa	Predicted RBP	32.97	■■■□□ 2.87
TNFRSF25-215	ENST00000485036	CAMTA1	Q9Y6Y1	1673 aa		32.95	■■■□□ 2.86
TNFRSF25-215	ENST00000485036	ABCC6	O95255	1503 aa		32.94	■■■□□ 2.86
TNFRSF25-215	ENST00000485036	LMOD3	Q0VAK6	560 aa		32.94	■■■□□ 2.86
TNFRSF25-215	ENST00000485036	RGPD2	P0DJD1	1756 aa		32.92	■■■□□ 2.86
TNFRSF25-215	ENST00000485036	COL18A1	P39060	1754 aa		32.91	■■■□□ 2.86
TNFRSF25-215	ENST00000485036	FANCI	Q9NVI1	1328 aa		32.91	■■■□□ 2.86
TNFRSF25-215	ENST00000485036	RGPD5	Q99666	1765 aa		32.9	■■■□□ 2.86
TNFRSF25-215	ENST00000485036	NCAPD2	Q15021	1401 aa		32.9	■■■□□ 2.86
TNFRSF25-215	ENST00000485036	CALD1	Q05682	793 aa	Known RBP	32.89	■■■□□ 2.86
TNFRSF25-215	ENST00000485036	ABCA3	Q99758	1704 aa		32.87	■■■□□ 2.85
TNFRSF25-215	ENST00000485036	LTV1	Q96GA3	475 aa	Predicted RBP	32.87	■■■□□ 2.85
TNFRSF25-215	ENST00000485036	LMO7	Q8WWI1	1683 aa		32.85	■■■□□ 2.85
TNFRSF25-215	ENST00000485036	ZBTB7C	A1YPR0	619 aa		32.84	■■■□□ 2.85
TNFRSF25-215	ENST00000485036	CT47B1	P0C2W7	299 aa	Predicted RBP	32.84	■■■□□ 2.85
TNFRSF25-215	ENST00000485036	CPD	O75976	1380 aa		32.84	■■■□□ 2.85
TNFRSF25-215	ENST00000485036	TSR2	Q969E8	191 aa	Known RBP	32.83	■■■□□ 2.85
TNFRSF25-215	ENST00000485036	PPP4R2	Q9NY27	417 aa		32.83	■■■□□ 2.85
TNFRSF25-215	ENST00000485036	ROBO1	Q9Y6N7	1651 aa		32.82	■■■□□ 2.85
TNFRSF25-215	ENST00000485036	PLEKHG5	O94827	1062 aa		32.82	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	FAM208A	Q9UK61	1670 aa	Known RBP	32.81	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	NBPF6	Q5VWK0	638 aa		32.81	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	NBPF4	Q96M43	638 aa		32.81	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	IFT57	Q9NWB7	429 aa		32.81	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	ZNF853	P0CG23	659 aa		32.8	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	MTHFSD	Q2M296	383 aa	Known RBP	32.8	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	GAS2L2	Q8NHY3	880 aa		32.8	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	AXIN2	Q9Y2T1	843 aa		32.8	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	ZC3H6	P61129	1189 aa	Known RBP	32.8	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.8	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	THUMPD2	Q9BTF0	503 aa	Known RBP	32.8	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	LRRC37A3	O60309	1634 aa		32.79	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.79	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	ANKRD24	Q8TF21	1146 aa		32.79	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	FAM83G	A6ND36	823 aa		32.78	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	PLIN1	O60240	522 aa		32.78	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	GNAI1	P63096	354 aa		32.78	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	CABLES1	Q8TDN4	633 aa		32.78	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	ERBB3	P21860	1342 aa		32.77	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	RARS	P54136	660 aa	Known RBP	32.77	■■■□□ 2.84
TNFRSF25-215	ENST00000485036	EXOSC9	Q06265	439 aa	Known RBP	32.76	■■■□□ 2.83
TNFRSF25-215	ENST00000485036	USHBP1	Q8N6Y0	703 aa		32.76	■■■□□ 2.83
TNFRSF25-215	ENST00000485036	BCAR3	O75815	825 aa		32.75	■■■□□ 2.83
TNFRSF25-215	ENST00000485036	CFAP44	Q96MT7	982 aa		32.75	■■■□□ 2.83
TNFRSF25-215	ENST00000485036	LRRC59	Q96AG4	307 aa	Known RBP	32.74	■■■□□ 2.83
TNFRSF25-215	ENST00000485036	DCTN1	Q14203	1278 aa		32.73	■■■□□ 2.83
TNFRSF25-215	ENST00000485036	KIAA0232	Q92628	1395 aa		32.73	■■■□□ 2.83
TNFRSF25-215	ENST00000485036	HTATSF1	O43719	755 aa	Known RBP	32.72	■■■□□ 2.83
TNFRSF25-215	ENST00000485036	CRB1	P82279	1406 aa		32.72	■■■□□ 2.83
TNFRSF25-215	ENST00000485036	MBIP	Q9NS73	344 aa		32.69	■■■□□ 2.82
TNFRSF25-215	ENST00000485036	EXOC6	Q8TAG9	804 aa		32.68	■■■□□ 2.82
TNFRSF25-215	ENST00000485036	MAP3K5	Q99683	1374 aa		32.68	■■■□□ 2.82
TNFRSF25-215	ENST00000485036	MCM10	Q7L590	875 aa		32.68	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms