RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 GRIN2AQ12879 1464 aa19.1■□□□□ 0.65
PCDH17-202ENST00000484979 AMOTQ4VCS5 1084 aa19.1■□□□□ 0.65
PCDH17-202ENST00000484979 C1orf115Q9H7X2 142 aa19.1■□□□□ 0.65
PCDH17-202ENST00000484979 SRGAP3O43295 1099 aa19.1■□□□□ 0.65
PCDH17-202ENST00000484979 FOSBP53539 338 aa19.1■□□□□ 0.65
PCDH17-202ENST00000484979 SIL1Q9H173 461 aa19.1■□□□□ 0.65
PCDH17-202ENST00000484979 TMPOP42166 694 aaKnown RBP19.09■□□□□ 0.65
PCDH17-202ENST00000484979 CCAR2Q8N163 923 aaKnown RBP19.09■□□□□ 0.65
PCDH17-202ENST00000484979 BCAR3O75815 825 aa19.08■□□□□ 0.65
PCDH17-202ENST00000484979 NSD3Q9BZ95 1437 aa19.08■□□□□ 0.65
PCDH17-202ENST00000484979 RPAP2Q8IXW5 612 aaPredicted RBP19.08■□□□□ 0.65
PCDH17-202ENST00000484979 GSE1Q14687 1217 aa19.08■□□□□ 0.64
PCDH17-202ENST00000484979 RABEP1Q15276 862 aa19.08■□□□□ 0.64
PCDH17-202ENST00000484979 CNKSR2Q8WXI2 1034 aa19.08■□□□□ 0.64
PCDH17-202ENST00000484979 FBXO31Q5XUX0 539 aaPredicted RBP19.08■□□□□ 0.64
PCDH17-202ENST00000484979 ZNF652Q9Y2D9 606 aa19.08■□□□□ 0.64
PCDH17-202ENST00000484979 PTCD1O75127 700 aaKnown RBP19.07■□□□□ 0.64
PCDH17-202ENST00000484979 CEBPAP49715 358 aaPredicted RBP19.07■□□□□ 0.64
PCDH17-202ENST00000484979 ATP2B1P20020 1258 aa19.07■□□□□ 0.64
PCDH17-202ENST00000484979 DENND4BO75064 1496 aaPredicted RBP19.06■□□□□ 0.64
PCDH17-202ENST00000484979 WASLO00401 505 aaPredicted RBP19.06■□□□□ 0.64
PCDH17-202ENST00000484979 MVPQ14764 893 aaKnown RBP19.06■□□□□ 0.64
PCDH17-202ENST00000484979 CADPS2Q86UW7 1296 aa19.06■□□□□ 0.64
PCDH17-202ENST00000484979 TMOD3Q9NYL9 352 aa19.06■□□□□ 0.64
PCDH17-202ENST00000484979 OFD1O75665 1012 aa19.05■□□□□ 0.64
PCDH17-202ENST00000484979 IGHMBP2P38935 993 aaKnown RBP19.05■□□□□ 0.64
PCDH17-202ENST00000484979 TRIM22Q8IYM9 498 aa19.05■□□□□ 0.64
PCDH17-202ENST00000484979 TXLNAP40222 546 aa19.05■□□□□ 0.64
PCDH17-202ENST00000484979 FANCIQ9NVI1 1328 aa19.05■□□□□ 0.64
PCDH17-202ENST00000484979 NAT10Q9H0A0 1025 aaKnown RBP19.04■□□□□ 0.64
PCDH17-202ENST00000484979 AKNAQ7Z591 1439 aa19.04■□□□□ 0.64
PCDH17-202ENST00000484979 ATP2B2Q01814 1243 aa19.04■□□□□ 0.64
PCDH17-202ENST00000484979 ANKRD1Q15327 319 aa19.04■□□□□ 0.64
PCDH17-202ENST00000484979 LARP1Q6PKG0 1096 aaKnown RBP19.04■□□□□ 0.64
PCDH17-202ENST00000484979 OLFM4Q6UX06 510 aa19.04■□□□□ 0.64
PCDH17-202ENST00000484979 CYP46A1Q9Y6A2 500 aa19.04■□□□□ 0.64
PCDH17-202ENST00000484979 NGLY1Q96IV0 654 aa19.03■□□□□ 0.64
PCDH17-202ENST00000484979 CTNNA3Q9UI47 895 aa19.03■□□□□ 0.64
PCDH17-202ENST00000484979 FKBP4Q02790 459 aaKnown RBP eCLIP19.03■□□□□ 0.64
PCDH17-202ENST00000484979 HOMER1Q86YM7 354 aa19.03■□□□□ 0.64
PCDH17-202ENST00000484979 JMYQ8N9B5 988 aa19.03■□□□□ 0.64
PCDH17-202ENST00000484979 TAF7Q15545 349 aaPredicted RBP19.02■□□□□ 0.64
PCDH17-202ENST00000484979 AACSQ86V21 672 aa19.02■□□□□ 0.64
PCDH17-202ENST00000484979 KINO60870 393 aaKnown RBP19.02■□□□□ 0.64
PCDH17-202ENST00000484979 DUSP27Q5VZP5 1158 aa19.02■□□□□ 0.64
PCDH17-202ENST00000484979 ADAMTS2O95450 1211 aa19.02■□□□□ 0.63
PCDH17-202ENST00000484979 LRPPRCP42704 1394 aaKnown RBP19.01■□□□□ 0.63
PCDH17-202ENST00000484979 MBD3O95983 291 aa19.01■□□□□ 0.63
PCDH17-202ENST00000484979 CT47A1Q5JQC4 288 aaPredicted RBP19.01■□□□□ 0.63
PCDH17-202ENST00000484979 NME9Q86XW9 330 aa19.01■□□□□ 0.63
PCDH17-202ENST00000484979 RBM5P52756 815 aaKnown RBP eCLIP19■□□□□ 0.63
PCDH17-202ENST00000484979 BICDL1Q6ZP65 573 aa19■□□□□ 0.63
PCDH17-202ENST00000484979 CDK5RAP3Q96JB5 506 aa19■□□□□ 0.63
PCDH17-202ENST00000484979 ABCC5O15440 1437 aa19■□□□□ 0.63
PCDH17-202ENST00000484979 GPS2Q13227 327 aa19■□□□□ 0.63
PCDH17-202ENST00000484979 CAMSAP2Q08AD1 1489 aa19■□□□□ 0.63
PCDH17-202ENST00000484979 EPS15P42566 896 aa19■□□□□ 0.63
PCDH17-202ENST00000484979 TMOD2Q9NZR1 351 aa19■□□□□ 0.63
PCDH17-202ENST00000484979 ADGRF5Q8IZF2 1346 aa18.99■□□□□ 0.63
PCDH17-202ENST00000484979 ABCC11Q96J66 1382 aa18.99■□□□□ 0.63
PCDH17-202ENST00000484979 ZPR1O75312 459 aa18.99■□□□□ 0.63
PCDH17-202ENST00000484979 ZNF396Q96N95 335 aaPredicted RBP18.99■□□□□ 0.63
PCDH17-202ENST00000484979 LRP2BPQ9P2M1 347 aa18.99■□□□□ 0.63
PCDH17-202ENST00000484979 NCOA1Q15788 1441 aa18.99■□□□□ 0.63
PCDH17-202ENST00000484979 EXOC5O00471 708 aa18.99■□□□□ 0.63
PCDH17-202ENST00000484979 ARID3AQ99856 593 aa18.99■□□□□ 0.63
PCDH17-202ENST00000484979 ZSCAN29Q8IWY8 852 aaPredicted RBP18.99■□□□□ 0.63
PCDH17-202ENST00000484979 PRKCSHP14314 528 aaPredicted RBP18.98■□□□□ 0.63
PCDH17-202ENST00000484979 STK38Q15208 465 aa18.98■□□□□ 0.63
PCDH17-202ENST00000484979 RAI14Q9P0K7 980 aa18.98■□□□□ 0.63
PCDH17-202ENST00000484979 HSP90AB3PQ58FF7 597 aa18.98■□□□□ 0.63
PCDH17-202ENST00000484979 DHX29Q7Z478 1369 aaKnown RBP18.98■□□□□ 0.63
PCDH17-202ENST00000484979 BLOC1S2Q6QNY1 142 aa18.98■□□□□ 0.63
PCDH17-202ENST00000484979 ODF2Q5BJF6 829 aa18.97■□□□□ 0.63
PCDH17-202ENST00000484979 MCM10Q7L590 875 aa18.97■□□□□ 0.63
PCDH17-202ENST00000484979 KRT28Q7Z3Y7 464 aa18.97■□□□□ 0.63
PCDH17-202ENST00000484979 TDO2P48775 406 aa18.97■□□□□ 0.63
PCDH17-202ENST00000484979 SOGA3Q5TF21 947 aa18.97■□□□□ 0.63
PCDH17-202ENST00000484979 ZNF592Q92610 1267 aa18.97■□□□□ 0.63
PCDH17-202ENST00000484979 FANCAO15360 1455 aa18.97■□□□□ 0.63
PCDH17-202ENST00000484979 KRT32Q14532 448 aa18.96■□□□□ 0.63
PCDH17-202ENST00000484979 CHD1LQ86WJ1 897 aa18.96■□□□□ 0.63
PCDH17-202ENST00000484979 IL1RAPL2Q9NP60 686 aa18.96■□□□□ 0.63
PCDH17-202ENST00000484979 AKAP2Q9Y2D5 859 aa18.96■□□□□ 0.63
PCDH17-202ENST00000484979 IFIT1P09914 478 aaKnown RBP18.96■□□□□ 0.63
PCDH17-202ENST00000484979 IFT57Q9NWB7 429 aa18.96■□□□□ 0.63
PCDH17-202ENST00000484979 KIF1BPQ96EK5 621 aa18.96■□□□□ 0.63
PCDH17-202ENST00000484979 UBAC1Q9BSL1 405 aa18.96■□□□□ 0.63
PCDH17-202ENST00000484979 METTL24Q5JXM2 366 aa18.96■□□□□ 0.63
PCDH17-202ENST00000484979 THUMPD2Q9BTF0 503 aaKnown RBP18.96■□□□□ 0.63
PCDH17-202ENST00000484979 CUL7Q14999 1698 aa18.95■□□□□ 0.62
PCDH17-202ENST00000484979 SLFN5Q08AF3 891 aa18.95■□□□□ 0.62
PCDH17-202ENST00000484979 ABCF2Q9UG63 623 aa18.95■□□□□ 0.62
PCDH17-202ENST00000484979 CCDC69A6NI79 296 aa18.95■□□□□ 0.62
PCDH17-202ENST00000484979 IDH1O75874 414 aaKnown RBP18.95■□□□□ 0.62
PCDH17-202ENST00000484979 MPRIPQ6WCQ1 1025 aa18.95■□□□□ 0.62
PCDH17-202ENST00000484979 CCDC85AQ96PX6 553 aaPredicted RBP18.95■□□□□ 0.62
PCDH17-202ENST00000484979 PIP4K2AP48426 406 aaPredicted RBP18.95■□□□□ 0.62
PCDH17-202ENST00000484979 C14orf93Q9H972 538 aaKnown RBP18.95■□□□□ 0.62
PCDH17-202ENST00000484979 WWC2Q6AWC2 1192 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms