RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 ZNF454Q8N9F8 522 aa9.01□□□□□ -0.97
PTCD3-215ENST00000484203 PTPRUQ92729 1446 aa9.01□□□□□ -0.97
PTCD3-215ENST00000484203 STRCP1A6NGW2 1772 aa9.01□□□□□ -0.97
PTCD3-215ENST00000484203 NEXMIFQ5QGS0 1516 aa9□□□□□ -0.97
PTCD3-215ENST00000484203 RAB3GAP2Q9H2M9 1393 aa9□□□□□ -0.97
PTCD3-215ENST00000484203 SPATA31E1Q6ZUB1 1445 aa9□□□□□ -0.97
PTCD3-215ENST00000484203 ADGRL3Q9HAR2 1447 aa9□□□□□ -0.97
PTCD3-215ENST00000484203 PSDA5PKW4 1024 aaPredicted RBP9□□□□□ -0.97
PTCD3-215ENST00000484203 BRINP3Q76B58 766 aa9□□□□□ -0.97
PTCD3-215ENST00000484203 LRRC59Q96AG4 307 aaKnown RBP9□□□□□ -0.97
PTCD3-215ENST00000484203 SIRT1Q96EB6 747 aa9□□□□□ -0.97
PTCD3-215ENST00000484203 CLTCL1P53675 1640 aa8.99□□□□□ -0.97
PTCD3-215ENST00000484203 MLLT3P42568 568 aaPredicted RBP8.99□□□□□ -0.97
PTCD3-215ENST00000484203 ABCC11Q96J66 1382 aa8.99□□□□□ -0.97
PTCD3-215ENST00000484203 TESPA1A2RU30 521 aaPredicted RBP8.98□□□□□ -0.97
PTCD3-215ENST00000484203 PHF14O94880 888 aa8.98□□□□□ -0.97
PTCD3-215ENST00000484203 FOSBP53539 338 aa8.98□□□□□ -0.97
PTCD3-215ENST00000484203 PPP4R3BQ5MIZ7 849 aa8.98□□□□□ -0.97
PTCD3-215ENST00000484203 PCDHGA10Q9Y5H3 936 aa8.98□□□□□ -0.97
PTCD3-215ENST00000484203 ADGRF5Q8IZF2 1346 aa8.98□□□□□ -0.97
PTCD3-215ENST00000484203 MED1Q15648 1581 aaPredicted RBP8.98□□□□□ -0.97
PTCD3-215ENST00000484203 LRPPRCP42704 1394 aaKnown RBP8.98□□□□□ -0.97
PTCD3-215ENST00000484203 C14orf93Q9H972 538 aaKnown RBP8.97□□□□□ -0.97
PTCD3-215ENST00000484203 DHX57Q6P158 1386 aaKnown RBP8.97□□□□□ -0.97
PTCD3-215ENST00000484203 ROBO2Q9HCK4 1378 aa8.97□□□□□ -0.97
PTCD3-215ENST00000484203 CHD2O14647 1828 aaKnown RBP8.96□□□□□ -0.97
PTCD3-215ENST00000484203 MEX3CQ5U5Q3 659 aaKnown RBP8.96□□□□□ -0.98
PTCD3-215ENST00000484203 ZNF772Q68DY9 489 aaPredicted RBP8.96□□□□□ -0.98
PTCD3-215ENST00000484203 SMYD5Q6GMV2 418 aa8.96□□□□□ -0.98
PTCD3-215ENST00000484203 TYW1BQ6NUM6 668 aa8.96□□□□□ -0.98
PTCD3-215ENST00000484203 ZDHHC16Q969W1 377 aa8.96□□□□□ -0.98
PTCD3-215ENST00000484203 EPAS1Q99814 870 aa8.96□□□□□ -0.98
PTCD3-215ENST00000484203 TECPR2O15040 1411 aa8.96□□□□□ -0.98
PTCD3-215ENST00000484203 MST1RQ04912 1400 aa8.96□□□□□ -0.98
PTCD3-215ENST00000484203 PBX2P40425 430 aa8.95□□□□□ -0.98
PTCD3-215ENST00000484203 PIK3C2GO75747 1445 aa8.95□□□□□ -0.98
PTCD3-215ENST00000484203 TULP1O00294 542 aaPredicted RBP8.94□□□□□ -0.98
PTCD3-215ENST00000484203 FBXW7Q969H0 707 aa8.94□□□□□ -0.98
PTCD3-215ENST00000484203 STK26Q9P289 416 aa8.94□□□□□ -0.98
PTCD3-215ENST00000484203 NPHP3Q7Z494 1330 aa8.94□□□□□ -0.98
PTCD3-215ENST00000484203 C1orf167Q5SNV9 1468 aa8.94□□□□□ -0.98
PTCD3-215ENST00000484203 NRXN3Q9Y4C0 1643 aa8.94□□□□□ -0.98
PTCD3-215ENST00000484203 ROBO1Q9Y6N7 1651 aa8.94□□□□□ -0.98
PTCD3-215ENST00000484203 XRN1Q8IZH2 1706 aaKnown RBP8.94□□□□□ -0.98
PTCD3-215ENST00000484203 MYOM2P54296 1465 aa8.93□□□□□ -0.98
PTCD3-215ENST00000484203 AHDC1Q5TGY3 1603 aaPredicted RBP8.93□□□□□ -0.98
PTCD3-215ENST00000484203 KIF1BO60333 1816 aa8.93□□□□□ -0.98
PTCD3-215ENST00000484203 MYO5BQ9ULV0 1848 aa8.92□□□□□ -0.98
PTCD3-215ENST00000484203 ASXL1Q8IXJ9 1541 aa8.92□□□□□ -0.98
PTCD3-215ENST00000484203 YTHDC2Q9H6S0 1430 aaKnown RBP8.92□□□□□ -0.98
PTCD3-215ENST00000484203 SOS2Q07890 1332 aaPredicted RBP8.92□□□□□ -0.98
PTCD3-215ENST00000484203 OSBPP22059 807 aa8.92□□□□□ -0.98
PTCD3-215ENST00000484203 ESCO1Q5FWF5 840 aa8.92□□□□□ -0.98
PTCD3-215ENST00000484203 TMEM132EQ6IEE7 984 aa8.92□□□□□ -0.98
PTCD3-215ENST00000484203 DCAF11Q8TEB1 546 aa8.92□□□□□ -0.98
PTCD3-215ENST00000484203 ADAM33Q9BZ11 813 aa8.92□□□□□ -0.98
PTCD3-215ENST00000484203 POGKQ9P215 609 aa8.92□□□□□ -0.98
PTCD3-215ENST00000484203 RGS17Q9UGC6 210 aaPredicted RBP8.92□□□□□ -0.98
PTCD3-215ENST00000484203 XIRP1Q702N8 1843 aaKnown RBP8.91□□□□□ -0.98
PTCD3-215ENST00000484203 NRXN1Q9ULB1 1477 aa8.91□□□□□ -0.98
PTCD3-215ENST00000484203 MAP3K7O43318 606 aa8.91□□□□□ -0.98
PTCD3-215ENST00000484203 CFAP70Q5T0N1 1121 aa8.91□□□□□ -0.98
PTCD3-215ENST00000484203 WAPLQ7Z5K2 1190 aa8.91□□□□□ -0.98
PTCD3-215ENST00000484203 RNF166Q96A37 237 aaPredicted RBP8.91□□□□□ -0.98
PTCD3-215ENST00000484203 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.91□□□□□ -0.98
PTCD3-215ENST00000484203 EIF3AQ14152 1382 aaKnown RBP8.9□□□□□ -0.98
PTCD3-215ENST00000484203 LSM11P83369 360 aaKnown RBP eCLIP8.9□□□□□ -0.98
PTCD3-215ENST00000484203 EN1Q05925 392 aaPredicted RBP8.9□□□□□ -0.98
PTCD3-215ENST00000484203 PSME1Q06323 249 aa8.9□□□□□ -0.98
PTCD3-215ENST00000484203 ANKRD13DQ6ZTN6 518 aa8.9□□□□□ -0.98
PTCD3-215ENST00000484203 ORAI2Q96SN7 254 aa8.9□□□□□ -0.98
PTCD3-215ENST00000484203 NUTM2BA6NNL0 878 aaPredicted RBP8.89□□□□□ -0.99
PTCD3-215ENST00000484203 NUTM2EB1AL46 878 aaPredicted RBP8.89□□□□□ -0.99
PTCD3-215ENST00000484203 PRIM1P49642 420 aaKnown RBP8.89□□□□□ -0.99
PTCD3-215ENST00000484203 RBM26Q5T8P6 1007 aaKnown RBP8.89□□□□□ -0.99
PTCD3-215ENST00000484203 NUTM2AQ8IVF1 878 aaPredicted RBP8.89□□□□□ -0.99
PTCD3-215ENST00000484203 PRAM1Q96QH2 718 aa8.89□□□□□ -0.99
PTCD3-215ENST00000484203 BCL2L12Q9HB09 334 aa8.89□□□□□ -0.99
PTCD3-215ENST00000484203 PNPLA6Q8IY17 1366 aa8.88□□□□□ -0.99
PTCD3-215ENST00000484203 FOXO3O43524 673 aa8.88□□□□□ -0.99
PTCD3-215ENST00000484203 PTPREP23469 700 aa8.88□□□□□ -0.99
PTCD3-215ENST00000484203 RXRBP28702 533 aa8.88□□□□□ -0.99
PTCD3-215ENST00000484203 POTEAQ6S8J7 498 aa8.88□□□□□ -0.99
PTCD3-215ENST00000484203 AXIN2Q9Y2T1 843 aa8.88□□□□□ -0.99
PTCD3-215ENST00000484203 COL16A1Q07092 1604 aaPredicted RBP8.87□□□□□ -0.99
PTCD3-215ENST00000484203 CDC42BPGQ6DT37 1551 aa8.87□□□□□ -0.99
PTCD3-215ENST00000484203 TSR1Q2NL82 804 aaKnown RBP8.87□□□□□ -0.99
PTCD3-215ENST00000484203 C6orf132Q5T0Z8 1188 aa8.87□□□□□ -0.99
PTCD3-215ENST00000484203 NGLY1Q96IV0 654 aa8.87□□□□□ -0.99
PTCD3-215ENST00000484203 KCNK17Q96T54 332 aa8.87□□□□□ -0.99
PTCD3-215ENST00000484203 PHLPP1O60346 1717 aa8.87□□□□□ -0.99
PTCD3-215ENST00000484203 NUTM2FA1L443 756 aa8.86□□□□□ -0.99
PTCD3-215ENST00000484203 ARHGAP33O14559 1287 aa8.86□□□□□ -0.99
PTCD3-215ENST00000484203 PSEN2P49810 448 aa8.86□□□□□ -0.99
PTCD3-215ENST00000484203 POTEEQ6S8J3 1075 aa8.86□□□□□ -0.99
PTCD3-215ENST00000484203 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.86□□□□□ -0.99
PTCD3-215ENST00000484203 PPLO60437 1756 aa8.86□□□□□ -0.99
PTCD3-215ENST00000484203 DLC1Q96QB1 1528 aa8.85□□□□□ -0.99
PTCD3-215ENST00000484203 AFF2P51816 1311 aa8.85□□□□□ -0.99
PTCD3-215ENST00000484203 DDX17Q92841 729 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms