RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 DDX19BQ9UMR2 479 aa15.73■□□□□ 0.11
LINC00477-201ENST00000483544 CPS1P31327 1500 aa15.73■□□□□ 0.11
LINC00477-201ENST00000483544 CDK12Q9NYV4 1490 aaPredicted RBP15.72■□□□□ 0.11
LINC00477-201ENST00000483544 NFKBIBQ15653 356 aa15.72■□□□□ 0.11
LINC00477-201ENST00000483544 SKAP1Q86WV1 359 aa15.72■□□□□ 0.11
LINC00477-201ENST00000483544 FTSJ3Q8IY81 847 aaKnown RBP15.72■□□□□ 0.11
LINC00477-201ENST00000483544 CHMP4BQ9H444 224 aaKnown RBP15.72■□□□□ 0.11
LINC00477-201ENST00000483544 CABP1Q9NZU7 370 aa15.71■□□□□ 0.11
LINC00477-201ENST00000483544 ITSN1Q15811 1721 aa15.71■□□□□ 0.11
LINC00477-201ENST00000483544 RLBP1P12271 317 aa15.71■□□□□ 0.1
LINC00477-201ENST00000483544 HDAC1Q13547 482 aaPredicted RBP15.71■□□□□ 0.1
LINC00477-201ENST00000483544 LRRC7Q96NW7 1537 aa15.7■□□□□ 0.1
LINC00477-201ENST00000483544 RIPK4P57078 832 aa15.7■□□□□ 0.1
LINC00477-201ENST00000483544 UTP14CQ5TAP6 766 aaKnown RBP15.7■□□□□ 0.1
LINC00477-201ENST00000483544 SMC4Q9NTJ3 1288 aa15.7■□□□□ 0.1
LINC00477-201ENST00000483544 CHRM1P11229 460 aaPredicted RBP15.69■□□□□ 0.1
LINC00477-201ENST00000483544 EXOSC9Q06265 439 aaKnown RBP15.69■□□□□ 0.1
LINC00477-201ENST00000483544 ATF7IPQ6VMQ6 1270 aa15.69■□□□□ 0.1
LINC00477-201ENST00000483544 UPF2Q9HAU5 1272 aaKnown RBP15.69■□□□□ 0.1
LINC00477-201ENST00000483544 PCDHB15Q9Y5E8 787 aa15.69■□□□□ 0.1
LINC00477-201ENST00000483544 WASLO00401 505 aaPredicted RBP15.68■□□□□ 0.1
LINC00477-201ENST00000483544 BECN1Q14457 450 aa15.68■□□□□ 0.1
LINC00477-201ENST00000483544 TEX2Q8IWB9 1127 aa15.68■□□□□ 0.1
LINC00477-201ENST00000483544 LMOD3Q0VAK6 560 aa15.68■□□□□ 0.1
LINC00477-201ENST00000483544 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
LINC00477-201ENST00000483544 POLKQ9UBT6 870 aa15.67■□□□□ 0.1
LINC00477-201ENST00000483544 C3P01024 1663 aa15.66■□□□□ 0.1
LINC00477-201ENST00000483544 NFE2L2Q16236 605 aa15.66■□□□□ 0.1
LINC00477-201ENST00000483544 ESF1Q9H501 851 aaKnown RBP15.66■□□□□ 0.1
LINC00477-201ENST00000483544 PDZRN3Q9UPQ7 1066 aa15.66■□□□□ 0.1
LINC00477-201ENST00000483544 SSH1Q8WYL5 1049 aa15.65■□□□□ 0.1
LINC00477-201ENST00000483544 ARHGAP45Q92619 1136 aa15.65■□□□□ 0.1
LINC00477-201ENST00000483544 UBR1Q8IWV7 1749 aa15.65■□□□□ 0.1
LINC00477-201ENST00000483544 USP19O94966 1318 aa15.64■□□□□ 0.09
LINC00477-201ENST00000483544 TRIM27P14373 513 aa15.64■□□□□ 0.09
LINC00477-201ENST00000483544 TSR2Q969E8 191 aaKnown RBP15.64■□□□□ 0.09
LINC00477-201ENST00000483544 BCL2L13Q9BXK5 485 aa15.64■□□□□ 0.09
LINC00477-201ENST00000483544 BCCIPQ9P287 314 aaKnown RBP eCLIP15.64■□□□□ 0.09
LINC00477-201ENST00000483544 TNRQ92752 1358 aa15.63■□□□□ 0.09
LINC00477-201ENST00000483544 GNAI1P63096 354 aa15.63■□□□□ 0.09
LINC00477-201ENST00000483544 IFT57Q9NWB7 429 aa15.63■□□□□ 0.09
LINC00477-201ENST00000483544 CCDC61Q9Y6R9 512 aa15.63■□□□□ 0.09
LINC00477-201ENST00000483544 NRKQ7Z2Y5 1582 aa15.63■□□□□ 0.09
LINC00477-201ENST00000483544 WAPLQ7Z5K2 1190 aa15.63■□□□□ 0.09
LINC00477-201ENST00000483544 PRKAR2BP31323 418 aa15.62■□□□□ 0.09
LINC00477-201ENST00000483544 SMC5Q8IY18 1101 aa15.62■□□□□ 0.09
LINC00477-201ENST00000483544 CHMP4AQ9BY43 222 aa15.62■□□□□ 0.09
LINC00477-201ENST00000483544 DLG5Q8TDM6 1919 aa15.62■□□□□ 0.09
LINC00477-201ENST00000483544 PIK3R4Q99570 1358 aa15.61■□□□□ 0.09
LINC00477-201ENST00000483544 TOPAZ1Q8N9V7 1692 aa15.61■□□□□ 0.09
LINC00477-201ENST00000483544 IL13P35225 146 aa15.61■□□□□ 0.09
LINC00477-201ENST00000483544 HAP1P54257 671 aaPredicted RBP15.61■□□□□ 0.09
LINC00477-201ENST00000483544 NUDT16Q96DE0 195 aaKnown RBP15.61■□□□□ 0.09
LINC00477-201ENST00000483544 COG3Q96JB2 828 aa15.61■□□□□ 0.09
LINC00477-201ENST00000483544 NOB1Q9ULX3 412 aaKnown RBP15.61■□□□□ 0.09
LINC00477-201ENST00000483544 TNNQ9UQP3 1299 aa15.61■□□□□ 0.09
LINC00477-201ENST00000483544 PTCH1Q13635 1447 aa15.61■□□□□ 0.09
LINC00477-201ENST00000483544 METP08581 1390 aa15.61■□□□□ 0.09
LINC00477-201ENST00000483544 TERF1P54274 439 aa15.6■□□□□ 0.09
LINC00477-201ENST00000483544 ITPRIPQ8IWB1 547 aa15.6■□□□□ 0.09
LINC00477-201ENST00000483544 TBC1D32Q96NH3 1257 aa15.6■□□□□ 0.09
LINC00477-201ENST00000483544 ZBTB40Q9NUA8 1239 aa15.6■□□□□ 0.09
LINC00477-201ENST00000483544 KIF24Q5T7B8 1368 aa15.6■□□□□ 0.09
LINC00477-201ENST00000483544 TMEM2Q9UHN6 1383 aa15.6■□□□□ 0.09
LINC00477-201ENST00000483544 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.6■□□□□ 0.09
LINC00477-201ENST00000483544 MTERF4Q7Z6M4 381 aaKnown RBP15.59■□□□□ 0.09
LINC00477-201ENST00000483544 ZNF853P0CG23 659 aa15.58■□□□□ 0.08
LINC00477-201ENST00000483544 PLEKHG1Q9ULL1 1385 aa15.58■□□□□ 0.08
LINC00477-201ENST00000483544 NALCNQ8IZF0 1738 aa15.58■□□□□ 0.08
LINC00477-201ENST00000483544 TMEM57Q8N5G2 664 aa15.57■□□□□ 0.08
LINC00477-201ENST00000483544 PLEKHG3A1L390 1219 aa15.55■□□□□ 0.08
LINC00477-201ENST00000483544 VAMP4O75379 141 aa15.55■□□□□ 0.08
LINC00477-201ENST00000483544 GCC1Q96CN9 775 aa15.55■□□□□ 0.08
LINC00477-201ENST00000483544 CFAP44Q96MT7 982 aa15.55■□□□□ 0.08
LINC00477-201ENST00000483544 TXNDC2Q86VQ3 553 aa15.54■□□□□ 0.08
LINC00477-201ENST00000483544 NME9Q86XW9 330 aa15.54■□□□□ 0.08
LINC00477-201ENST00000483544 MRPL50Q8N5N7 158 aaKnown RBP15.54■□□□□ 0.08
LINC00477-201ENST00000483544 ADAMTS13Q76LX8 1427 aa15.54■□□□□ 0.08
LINC00477-201ENST00000483544 RIMS1Q86UR5 1692 aaKnown RBP15.54■□□□□ 0.08
LINC00477-201ENST00000483544 NUCB1Q02818 461 aa15.54■□□□□ 0.08
LINC00477-201ENST00000483544 MLECQ14165 292 aa15.54■□□□□ 0.08
LINC00477-201ENST00000483544 API5Q9BZZ5 524 aaKnown RBP15.54■□□□□ 0.08
LINC00477-201ENST00000483544 DIP2AQ14689 1571 aa15.53■□□□□ 0.08
LINC00477-201ENST00000483544 ZFP91Q96JP5 570 aaPredicted RBP15.53■□□□□ 0.08
LINC00477-201ENST00000483544 EMILIN1Q9Y6C2 1016 aa15.53■□□□□ 0.08
LINC00477-201ENST00000483544 SEC24BO95487 1268 aa15.52■□□□□ 0.08
LINC00477-201ENST00000483544 SLC4A3P48751 1232 aa15.52■□□□□ 0.08
LINC00477-201ENST00000483544 TAF3Q5VWG9 929 aa15.52■□□□□ 0.08
LINC00477-201ENST00000483544 POTEDQ86YR6 584 aa15.52■□□□□ 0.08
LINC00477-201ENST00000483544 CERKQ8TCT0 537 aa15.52■□□□□ 0.08
LINC00477-201ENST00000483544 OVOS2A0A0J9YW53 1432 aa15.52■□□□□ 0.08
LINC00477-201ENST00000483544 OVOS2Q6IE36 1432 aa15.52■□□□□ 0.08
LINC00477-201ENST00000483544 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.52■□□□□ 0.08
LINC00477-201ENST00000483544 ABCC4O15439 1325 aa15.52■□□□□ 0.07
LINC00477-201ENST00000483544 RGPD1P0DJD0 1748 aa15.52■□□□□ 0.07
LINC00477-201ENST00000483544 DMTNQ08495 405 aa15.51■□□□□ 0.07
LINC00477-201ENST00000483544 TTC21BQ7Z4L5 1316 aa15.51■□□□□ 0.07
LINC00477-201ENST00000483544 SLIT1O75093 1534 aa15.51■□□□□ 0.07
LINC00477-201ENST00000483544 USP31Q70CQ4 1352 aa15.51■□□□□ 0.07
LINC00477-201ENST00000483544 PHACTR3Q96KR7 559 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms