RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 GBP4Q96PP9 640 aa17.82■□□□□ 0.44
COL9A2-207ENST00000482722 NOB1Q9ULX3 412 aaKnown RBP17.82■□□□□ 0.44
COL9A2-207ENST00000482722 NSD2O96028 1365 aa17.82■□□□□ 0.44
COL9A2-207ENST00000482722 SMC5Q8IY18 1101 aa17.82■□□□□ 0.44
COL9A2-207ENST00000482722 CD163L1Q9NR16 1453 aa17.81■□□□□ 0.44
COL9A2-207ENST00000482722 RAB3GAP1Q15042 981 aa17.81■□□□□ 0.44
COL9A2-207ENST00000482722 PLEKHF1Q96S99 279 aa17.81■□□□□ 0.44
COL9A2-207ENST00000482722 WASLO00401 505 aaPredicted RBP17.81■□□□□ 0.44
COL9A2-207ENST00000482722 HSP90AB1P08238 724 aaKnown RBP17.81■□□□□ 0.44
COL9A2-207ENST00000482722 SNX21Q969T3 373 aa17.81■□□□□ 0.44
COL9A2-207ENST00000482722 NUDT16Q96DE0 195 aaKnown RBP17.81■□□□□ 0.44
COL9A2-207ENST00000482722 ABCC11Q96J66 1382 aa17.8■□□□□ 0.44
COL9A2-207ENST00000482722 DIAPH1O60610 1272 aaKnown RBP17.8■□□□□ 0.44
COL9A2-207ENST00000482722 SKOR2Q2VWA4 1001 aaPredicted RBP17.8■□□□□ 0.44
COL9A2-207ENST00000482722 TMEM57Q8N5G2 664 aa17.8■□□□□ 0.44
COL9A2-207ENST00000482722 CCDC173Q0VFZ6 552 aa17.8■□□□□ 0.44
COL9A2-207ENST00000482722 RBM25P49756 843 aaKnown RBP17.79■□□□□ 0.44
COL9A2-207ENST00000482722 RRS1Q15050 365 aaKnown RBP17.79■□□□□ 0.44
COL9A2-207ENST00000482722 CIZ1Q9ULV3 898 aaPredicted RBP17.79■□□□□ 0.44
COL9A2-207ENST00000482722 EMILIN1Q9Y6C2 1016 aa17.79■□□□□ 0.44
COL9A2-207ENST00000482722 HMOX1P09601 288 aa17.79■□□□□ 0.44
COL9A2-207ENST00000482722 USP32Q8NFA0 1604 aa17.78■□□□□ 0.44
COL9A2-207ENST00000482722 ATF7IPQ6VMQ6 1270 aa17.78■□□□□ 0.44
COL9A2-207ENST00000482722 ZSCAN30Q86W11 494 aa17.78■□□□□ 0.44
COL9A2-207ENST00000482722 PPP1R9BQ96SB3 815 aa17.78■□□□□ 0.44
COL9A2-207ENST00000482722 REREQ9P2R6 1566 aa17.78■□□□□ 0.44
COL9A2-207ENST00000482722 ATAD2Q6PL18 1390 aa17.78■□□□□ 0.44
COL9A2-207ENST00000482722 NASPP49321 788 aaPredicted RBP17.78■□□□□ 0.44
COL9A2-207ENST00000482722 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.78■□□□□ 0.44
COL9A2-207ENST00000482722 PUS7Q96PZ0 661 aaKnown RBP17.78■□□□□ 0.44
COL9A2-207ENST00000482722 TMEM2Q9UHN6 1383 aa17.78■□□□□ 0.44
COL9A2-207ENST00000482722 OFD1O75665 1012 aa17.77■□□□□ 0.44
COL9A2-207ENST00000482722 RBM10P98175 930 aaKnown RBP17.77■□□□□ 0.44
COL9A2-207ENST00000482722 DDX19BQ9UMR2 479 aa17.77■□□□□ 0.44
COL9A2-207ENST00000482722 ROBO2Q9HCK4 1378 aa17.77■□□□□ 0.44
COL9A2-207ENST00000482722 HDAC1Q13547 482 aaPredicted RBP17.77■□□□□ 0.44
COL9A2-207ENST00000482722 PRR36Q9H6K5 1346 aa17.77■□□□□ 0.43
COL9A2-207ENST00000482722 THUMPD2Q9BTF0 503 aaKnown RBP17.76■□□□□ 0.43
COL9A2-207ENST00000482722 CD2BP2O95400 341 aaKnown RBP17.76■□□□□ 0.43
COL9A2-207ENST00000482722 ELL2O00472 640 aaPredicted RBP17.75■□□□□ 0.43
COL9A2-207ENST00000482722 PLEKHG5O94827 1062 aa17.75■□□□□ 0.43
COL9A2-207ENST00000482722 PRKAR2BP31323 418 aa17.75■□□□□ 0.43
COL9A2-207ENST00000482722 RBM42Q9BTD8 480 aaKnown RBP17.75■□□□□ 0.43
COL9A2-207ENST00000482722 POLKQ9UBT6 870 aa17.74■□□□□ 0.43
COL9A2-207ENST00000482722 CALD1Q05682 793 aaKnown RBP17.74■□□□□ 0.43
COL9A2-207ENST00000482722 NRXN3Q9Y4C0 1643 aa17.74■□□□□ 0.43
COL9A2-207ENST00000482722 PTMSP20962 102 aa17.73■□□□□ 0.43
COL9A2-207ENST00000482722 MSNP26038 577 aaKnown RBP17.73■□□□□ 0.43
COL9A2-207ENST00000482722 ZBTB40Q9NUA8 1239 aa17.73■□□□□ 0.43
COL9A2-207ENST00000482722 PPIP5K1Q6PFW1 1433 aa17.73■□□□□ 0.43
COL9A2-207ENST00000482722 SSFA2P28290 1259 aa17.73■□□□□ 0.43
COL9A2-207ENST00000482722 HDGFP51858 240 aaKnown RBP17.73■□□□□ 0.43
COL9A2-207ENST00000482722 C1orf115Q9H7X2 142 aa17.73■□□□□ 0.43
COL9A2-207ENST00000482722 CT47B1P0C2W7 299 aaPredicted RBP17.73■□□□□ 0.43
COL9A2-207ENST00000482722 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.73■□□□□ 0.43
COL9A2-207ENST00000482722 KIF2CQ99661 725 aa17.73■□□□□ 0.43
COL9A2-207ENST00000482722 AMOTL2Q9Y2J4 779 aa17.73■□□□□ 0.43
COL9A2-207ENST00000482722 ADGRB2O60241 1585 aa17.72■□□□□ 0.43
COL9A2-207ENST00000482722 CCDC61Q9Y6R9 512 aa17.72■□□□□ 0.43
COL9A2-207ENST00000482722 ANP32BQ92688 251 aaKnown RBP17.72■□□□□ 0.43
COL9A2-207ENST00000482722 NUCB1Q02818 461 aa17.71■□□□□ 0.43
COL9A2-207ENST00000482722 ANKRD45Q5TZF3 282 aa17.71■□□□□ 0.43
COL9A2-207ENST00000482722 EID1Q9Y6B2 187 aa17.71■□□□□ 0.43
COL9A2-207ENST00000482722 CHD1LQ86WJ1 897 aa17.7■□□□□ 0.42
COL9A2-207ENST00000482722 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
COL9A2-207ENST00000482722 PHACTR3Q96KR7 559 aa17.7■□□□□ 0.42
COL9A2-207ENST00000482722 FAM13BQ9NYF5 915 aa17.7■□□□□ 0.42
COL9A2-207ENST00000482722 PRDM4Q9UKN5 801 aa17.7■□□□□ 0.42
COL9A2-207ENST00000482722 R3HCC1Q9Y3T6 440 aaKnown RBP17.7■□□□□ 0.42
COL9A2-207ENST00000482722 DDX49Q9Y6V7 483 aaKnown RBP17.7■□□□□ 0.42
COL9A2-207ENST00000482722 COL3A1P02461 1466 aaPredicted RBP17.7■□□□□ 0.42
COL9A2-207ENST00000482722 SETD1AO15047 1707 aaKnown RBP17.7■□□□□ 0.42
COL9A2-207ENST00000482722 NUTM2GQ5VZR2 741 aa17.69■□□□□ 0.42
COL9A2-207ENST00000482722 ADAMTS13Q76LX8 1427 aa17.69■□□□□ 0.42
COL9A2-207ENST00000482722 KIF16BQ96L93 1317 aa17.69■□□□□ 0.42
COL9A2-207ENST00000482722 K7ELQ4 463 aaPredicted RBP17.68■□□□□ 0.42
COL9A2-207ENST00000482722 KLHL40Q2TBA0 621 aa17.68■□□□□ 0.42
COL9A2-207ENST00000482722 GAS2L2Q8NHY3 880 aa17.68■□□□□ 0.42
COL9A2-207ENST00000482722 GOLGA6L22H0YM25 854 aa17.68■□□□□ 0.42
COL9A2-207ENST00000482722 TERF1P54274 439 aa17.68■□□□□ 0.42
COL9A2-207ENST00000482722 NCBP3Q53F19 620 aaKnown RBP17.68■□□□□ 0.42
COL9A2-207ENST00000482722 PTPRUQ92729 1446 aa17.67■□□□□ 0.42
COL9A2-207ENST00000482722 UBR1Q8IWV7 1749 aa17.67■□□□□ 0.42
COL9A2-207ENST00000482722 ACEP12821 1306 aa17.67■□□□□ 0.42
COL9A2-207ENST00000482722 FCHSD2O94868 740 aa17.66■□□□□ 0.42
COL9A2-207ENST00000482722 BAG4O95429 457 aaKnown RBP17.66■□□□□ 0.42
COL9A2-207ENST00000482722 IL16Q14005 1332 aa17.66■□□□□ 0.42
COL9A2-207ENST00000482722 IBTKQ9P2D0 1353 aaPredicted RBP17.66■□□□□ 0.42
COL9A2-207ENST00000482722 TSPYL6Q8N831 410 aa17.66■□□□□ 0.42
COL9A2-207ENST00000482722 AK9Q5TCS8 1911 aa17.66■□□□□ 0.42
COL9A2-207ENST00000482722 MAP2P11137 1827 aaKnown RBP17.65■□□□□ 0.42
COL9A2-207ENST00000482722 TBC1D9Q6ZT07 1266 aa17.65■□□□□ 0.42
COL9A2-207ENST00000482722 COG3Q96JB2 828 aa17.65■□□□□ 0.42
COL9A2-207ENST00000482722 CPS1P31327 1500 aa17.65■□□□□ 0.42
COL9A2-207ENST00000482722 XPCQ01831 940 aaPredicted RBP17.64■□□□□ 0.41
COL9A2-207ENST00000482722 KCNA6P17658 529 aa17.64■□□□□ 0.41
COL9A2-207ENST00000482722 CLEC17AQ6ZS10 378 aa17.64■□□□□ 0.41
COL9A2-207ENST00000482722 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.64■□□□□ 0.41
COL9A2-207ENST00000482722 BMP2KLQ5H9B9 411 aa17.63■□□□□ 0.41
COL9A2-207ENST00000482722 DCTN1Q14203 1278 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms