RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 MSH6P52701 1360 aa28.84■■■□□ 2.21
RUNX1-216ENST00000482318 XIRP1Q702N8 1843 aaKnown RBP28.83■■■□□ 2.21
RUNX1-216ENST00000482318 TRPM3Q9HCF6 1732 aaPredicted RBP28.83■■■□□ 2.21
RUNX1-216ENST00000482318 HMOX1P09601 288 aa28.83■■■□□ 2.21
RUNX1-216ENST00000482318 AMPHP49418 695 aa28.82■■■□□ 2.2
RUNX1-216ENST00000482318 MYH16Q9H6N6 1097 aa28.82■■■□□ 2.2
RUNX1-216ENST00000482318 FOXO3O43524 673 aa28.8■■■□□ 2.2
RUNX1-216ENST00000482318 RIPK4P57078 832 aa28.8■■■□□ 2.2
RUNX1-216ENST00000482318 HSP90AB2PQ58FF8 381 aa28.8■■■□□ 2.2
RUNX1-216ENST00000482318 NUTM2GQ5VZR2 741 aa28.8■■■□□ 2.2
RUNX1-216ENST00000482318 RTL1A6NKG5 1358 aa28.79■■■□□ 2.2
RUNX1-216ENST00000482318 LTN1O94822 1766 aa28.79■■■□□ 2.2
RUNX1-216ENST00000482318 IL16Q14005 1332 aa28.79■■■□□ 2.2
RUNX1-216ENST00000482318 NFE2L2Q16236 605 aa28.78■■■□□ 2.2
RUNX1-216ENST00000482318 KCNH5Q8NCM2 988 aa28.78■■■□□ 2.2
RUNX1-216ENST00000482318 TRIM35Q9UPQ4 493 aa28.78■■■□□ 2.2
RUNX1-216ENST00000482318 ARHGEF10O15013 1369 aa28.78■■■□□ 2.2
RUNX1-216ENST00000482318 NFAT5O94916 1531 aa28.77■■■□□ 2.2
RUNX1-216ENST00000482318 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.76■■■□□ 2.19
RUNX1-216ENST00000482318 KRT28Q7Z3Y7 464 aa28.75■■■□□ 2.19
RUNX1-216ENST00000482318 PHRF1Q9P1Y6 1649 aaKnown RBP28.75■■■□□ 2.19
RUNX1-216ENST00000482318 DLG5Q8TDM6 1919 aa28.74■■■□□ 2.19
RUNX1-216ENST00000482318 SLIT3O75094 1523 aa28.74■■■□□ 2.19
RUNX1-216ENST00000482318 LMOD3Q0VAK6 560 aa28.73■■■□□ 2.19
RUNX1-216ENST00000482318 SULT6B1Q6IMI4 303 aa28.73■■■□□ 2.19
RUNX1-216ENST00000482318 PHACTR3Q96KR7 559 aa28.73■■■□□ 2.19
RUNX1-216ENST00000482318 HOXC9P31274 260 aa28.72■■■□□ 2.19
RUNX1-216ENST00000482318 CALD1Q05682 793 aaKnown RBP28.72■■■□□ 2.19
RUNX1-216ENST00000482318 ALS2Q96Q42 1657 aa28.72■■■□□ 2.19
RUNX1-216ENST00000482318 XPCQ01831 940 aaPredicted RBP28.69■■■□□ 2.18
RUNX1-216ENST00000482318 NPHP3Q7Z494 1330 aa28.69■■■□□ 2.18
RUNX1-216ENST00000482318 ZNF335Q9H4Z2 1342 aaPredicted RBP28.69■■■□□ 2.18
RUNX1-216ENST00000482318 CT47B1P0C2W7 299 aaPredicted RBP28.68■■■□□ 2.18
RUNX1-216ENST00000482318 USP19O94966 1318 aa28.68■■■□□ 2.18
RUNX1-216ENST00000482318 IGSF1Q8N6C5 1336 aa28.68■■■□□ 2.18
RUNX1-216ENST00000482318 KDRP35968 1356 aa28.68■■■□□ 2.18
RUNX1-216ENST00000482318 AEBP1Q8IUX7 1158 aa28.66■■■□□ 2.18
RUNX1-216ENST00000482318 IP6K1Q92551 441 aa28.66■■■□□ 2.18
RUNX1-216ENST00000482318 FANCIQ9NVI1 1328 aa28.66■■■□□ 2.18
RUNX1-216ENST00000482318 LMOD2Q6P5Q4 547 aa28.64■■■□□ 2.18
RUNX1-216ENST00000482318 PLIN1O60240 522 aa28.63■■■□□ 2.17
RUNX1-216ENST00000482318 GCP02774 474 aa28.63■■■□□ 2.17
RUNX1-216ENST00000482318 EYA1Q99502 592 aa28.63■■■□□ 2.17
RUNX1-216ENST00000482318 PXDNQ92626 1479 aa28.59■■■□□ 2.17
RUNX1-216ENST00000482318 TSR2Q969E8 191 aaKnown RBP28.59■■■□□ 2.17
RUNX1-216ENST00000482318 TNS3Q68CZ2 1445 aa28.59■■■□□ 2.17
RUNX1-216ENST00000482318 GNAI1P63096 354 aa28.58■■■□□ 2.17
RUNX1-216ENST00000482318 EXOC6Q8TAG9 804 aa28.58■■■□□ 2.17
RUNX1-216ENST00000482318 RARSP54136 660 aaKnown RBP28.57■■■□□ 2.16
RUNX1-216ENST00000482318 B4GALNT3Q6L9W6 998 aa28.57■■■□□ 2.16
RUNX1-216ENST00000482318 ARHGEF25Q86VW2 580 aa28.57■■■□□ 2.16
RUNX1-216ENST00000482318 CCDC136Q96JN2 1154 aa28.57■■■□□ 2.16
RUNX1-216ENST00000482318 IFT57Q9NWB7 429 aa28.57■■■□□ 2.16
RUNX1-216ENST00000482318 BCAR3O75815 825 aa28.57■■■□□ 2.16
RUNX1-216ENST00000482318 MED1Q15648 1581 aaPredicted RBP28.55■■■□□ 2.16
RUNX1-216ENST00000482318 BRINP3Q76B58 766 aa28.55■■■□□ 2.16
RUNX1-216ENST00000482318 EXOSC9Q06265 439 aaKnown RBP28.54■■■□□ 2.16
RUNX1-216ENST00000482318 GAS2L2Q8NHY3 880 aa28.54■■■□□ 2.16
RUNX1-216ENST00000482318 SLAIN2Q9P270 581 aa28.54■■■□□ 2.16
RUNX1-216ENST00000482318 LTV1Q96GA3 475 aaPredicted RBP28.53■■■□□ 2.16
RUNX1-216ENST00000482318 CRBNQ96SW2 442 aa28.52■■■□□ 2.16
RUNX1-216ENST00000482318 ZBTB7CA1YPR0 619 aa28.52■■■□□ 2.16
RUNX1-216ENST00000482318 ZNF853P0CG23 659 aa28.51■■■□□ 2.15
RUNX1-216ENST00000482318 CANXP27824 592 aaKnown RBP28.51■■■□□ 2.15
RUNX1-216ENST00000482318 PDE3AQ14432 1141 aa28.51■■■□□ 2.15
RUNX1-216ENST00000482318 DDX17Q92841 729 aaKnown RBP28.51■■■□□ 2.15
RUNX1-216ENST00000482318 CFAP44Q96MT7 982 aa28.51■■■□□ 2.15
RUNX1-216ENST00000482318 SPATA31A3Q5VYP0 1347 aa28.51■■■□□ 2.15
RUNX1-216ENST00000482318 ZNF428Q96B54 188 aa28.5■■■□□ 2.15
RUNX1-216ENST00000482318 THUMPD2Q9BTF0 503 aaKnown RBP28.5■■■□□ 2.15
RUNX1-216ENST00000482318 CRYBG1Q9Y4K1 1723 aa28.5■■■□□ 2.15
RUNX1-216ENST00000482318 C20orf194Q5TEA3 1177 aa28.49■■■□□ 2.15
RUNX1-216ENST00000482318 LAS1LQ9Y4W2 734 aaKnown RBP28.49■■■□□ 2.15
RUNX1-216ENST00000482318 MTHFSDQ2M296 383 aaKnown RBP28.48■■■□□ 2.15
RUNX1-216ENST00000482318 ABCC6O95255 1503 aa28.48■■■□□ 2.15
RUNX1-216ENST00000482318 RGPD2P0DJD1 1756 aa28.47■■■□□ 2.15
RUNX1-216ENST00000482318 FAM83GA6ND36 823 aa28.46■■■□□ 2.15
RUNX1-216ENST00000482318 RTF1Q92541 710 aaKnown RBP28.46■■■□□ 2.15
RUNX1-216ENST00000482318 CAMTA1Q9Y6Y1 1673 aa28.46■■■□□ 2.15
RUNX1-216ENST00000482318 HTATSF1O43719 755 aaKnown RBP28.46■■■□□ 2.15
RUNX1-216ENST00000482318 PLEKHG5O94827 1062 aa28.44■■■□□ 2.14
RUNX1-216ENST00000482318 MBIPQ9NS73 344 aa28.44■■■□□ 2.14
RUNX1-216ENST00000482318 NCAPD2Q15021 1401 aa28.44■■■□□ 2.14
RUNX1-216ENST00000482318 RGPD5Q99666 1765 aa28.44■■■□□ 2.14
RUNX1-216ENST00000482318 SOS2Q07890 1332 aaPredicted RBP28.44■■■□□ 2.14
RUNX1-216ENST00000482318 NHSL1Q5SYE7 1610 aa28.43■■■□□ 2.14
RUNX1-216ENST00000482318 DCTN1Q14203 1278 aa28.43■■■□□ 2.14
RUNX1-216ENST00000482318 ALDH1L2Q3SY69 923 aa28.43■■■□□ 2.14
RUNX1-216ENST00000482318 NBPF6Q5VWK0 638 aa28.43■■■□□ 2.14
RUNX1-216ENST00000482318 FRAT1Q92837 279 aaPredicted RBP28.43■■■□□ 2.14
RUNX1-216ENST00000482318 NBPF4Q96M43 638 aa28.43■■■□□ 2.14
RUNX1-216ENST00000482318 ANKRD24Q8TF21 1146 aa28.42■■■□□ 2.14
RUNX1-216ENST00000482318 SMC4Q9NTJ3 1288 aa28.42■■■□□ 2.14
RUNX1-216ENST00000482318 MS4A1P11836 297 aa28.4■■■□□ 2.14
RUNX1-216ENST00000482318 LRRC37A3O60309 1634 aa28.4■■■□□ 2.14
RUNX1-216ENST00000482318 ZC3H6P61129 1189 aaKnown RBP28.4■■■□□ 2.14
RUNX1-216ENST00000482318 MCM10Q7L590 875 aa28.4■■■□□ 2.14
RUNX1-216ENST00000482318 BCL2L13Q9BXK5 485 aa28.4■■■□□ 2.14
RUNX1-216ENST00000482318 FAM208AQ9UK61 1670 aaKnown RBP28.4■■■□□ 2.14
RUNX1-216ENST00000482318 COL18A1P39060 1754 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms