RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 RSBN1LQ6PCB5 846 aaPredicted RBP11.37□□□□□ -0.59
LINC00888-203ENST00000482098 SULF1Q8IWU6 871 aa11.37□□□□□ -0.59
LINC00888-203ENST00000482098 ZNF710Q8N1W2 664 aa11.37□□□□□ -0.59
LINC00888-203ENST00000482098 TTC13Q8NBP0 860 aa11.37□□□□□ -0.59
LINC00888-203ENST00000482098 E9PSI1 815 aa11.36□□□□□ -0.59
LINC00888-203ENST00000482098 GJA5P36382 358 aa11.36□□□□□ -0.59
LINC00888-203ENST00000482098 HDGFL1Q5TGJ6 251 aa11.36□□□□□ -0.59
LINC00888-203ENST00000482098 WASHC4Q2M389 1173 aa11.35□□□□□ -0.59
LINC00888-203ENST00000482098 C3orf67Q6ZVT6 689 aa11.35□□□□□ -0.59
LINC00888-203ENST00000482098 STRCP1A6NGW2 1772 aa11.35□□□□□ -0.59
LINC00888-203ENST00000482098 SCAF11Q99590 1463 aaKnown RBP11.34□□□□□ -0.59
LINC00888-203ENST00000482098 NUTM2BA6NNL0 878 aaPredicted RBP11.34□□□□□ -0.59
LINC00888-203ENST00000482098 NUTM2EB1AL46 878 aaPredicted RBP11.34□□□□□ -0.59
LINC00888-203ENST00000482098 CD46P15529 392 aa11.34□□□□□ -0.59
LINC00888-203ENST00000482098 RFX1P22670 979 aa11.34□□□□□ -0.59
LINC00888-203ENST00000482098 NUTM2DQ5VT03 806 aaPredicted RBP11.34□□□□□ -0.59
LINC00888-203ENST00000482098 NUTM2AQ8IVF1 878 aaPredicted RBP11.34□□□□□ -0.59
LINC00888-203ENST00000482098 NDUFB9Q9Y6M9 179 aa11.34□□□□□ -0.59
LINC00888-203ENST00000482098 LILRB3O75022 631 aa11.33□□□□□ -0.6
LINC00888-203ENST00000482098 USP17L8P0C7I0 530 aa11.33□□□□□ -0.6
LINC00888-203ENST00000482098 PRSS12P56730 875 aa11.33□□□□□ -0.6
LINC00888-203ENST00000482098 ZNF644Q9H582 1327 aaPredicted RBP11.33□□□□□ -0.6
LINC00888-203ENST00000482098 LOC105371045A0A1W2PR82 267 aa11.32□□□□□ -0.6
LINC00888-203ENST00000482098 PCDHGA4Q9Y5G9 962 aa11.32□□□□□ -0.6
LINC00888-203ENST00000482098 LRRC9Q6ZRR7 1453 aa11.32□□□□□ -0.6
LINC00888-203ENST00000482098 ARHGAP23Q9P227 1491 aa11.32□□□□□ -0.6
LINC00888-203ENST00000482098 MTUS2Q5JR59 1369 aa11.31□□□□□ -0.6
LINC00888-203ENST00000482098 JCADQ9P266 1359 aa11.31□□□□□ -0.6
LINC00888-203ENST00000482098 SLIT1O75093 1534 aa11.31□□□□□ -0.6
LINC00888-203ENST00000482098 ZC3H13Q5T200 1668 aaKnown RBP11.31□□□□□ -0.6
LINC00888-203ENST00000482098 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.31□□□□□ -0.6
LINC00888-203ENST00000482098 MOXD2PA6NHM9 499 aa11.31□□□□□ -0.6
LINC00888-203ENST00000482098 FOSBP53539 338 aa11.31□□□□□ -0.6
LINC00888-203ENST00000482098 QPCTQ16769 361 aa11.31□□□□□ -0.6
LINC00888-203ENST00000482098 ZNF772Q68DY9 489 aaPredicted RBP11.31□□□□□ -0.6
LINC00888-203ENST00000482098 TXNDC2Q86VQ3 553 aa11.31□□□□□ -0.6
LINC00888-203ENST00000482098 ZDHHC16Q969W1 377 aa11.31□□□□□ -0.6
LINC00888-203ENST00000482098 ZNF428Q96B54 188 aa11.31□□□□□ -0.6
LINC00888-203ENST00000482098 EID1Q9Y6B2 187 aa11.31□□□□□ -0.6
LINC00888-203ENST00000482098 CCDC141Q6ZP82 1450 aa11.31□□□□□ -0.6
LINC00888-203ENST00000482098 RCCD1A6NED2 376 aa11.3□□□□□ -0.6
LINC00888-203ENST00000482098 KCNA6P17658 529 aa11.3□□□□□ -0.6
LINC00888-203ENST00000482098 LTKP29376 864 aa11.3□□□□□ -0.6
LINC00888-203ENST00000482098 ERVK-7P63135 1459 aa11.3□□□□□ -0.6
LINC00888-203ENST00000482098 TMEM94Q12767 1356 aa11.29□□□□□ -0.6
LINC00888-203ENST00000482098 CEP162Q5TB80 1403 aa11.29□□□□□ -0.6
LINC00888-203ENST00000482098 CDCA7LQ96GN5 454 aa11.29□□□□□ -0.6
LINC00888-203ENST00000482098 SPATA31A6Q5VVP1 1343 aa11.29□□□□□ -0.6
LINC00888-203ENST00000482098 DDX11L8A8MPP1 907 aa11.28□□□□□ -0.6
LINC00888-203ENST00000482098 TSPY4P0CV99 314 aa11.28□□□□□ -0.6
LINC00888-203ENST00000482098 TSPY10P0CW01 314 aa11.28□□□□□ -0.6
LINC00888-203ENST00000482098 CCDC27Q2M243 656 aa11.28□□□□□ -0.6
LINC00888-203ENST00000482098 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
LINC00888-203ENST00000482098 CFAP70Q5T0N1 1121 aa11.28□□□□□ -0.6
LINC00888-203ENST00000482098 PRPF38BQ5VTL8 546 aaKnown RBP11.28□□□□□ -0.6
LINC00888-203ENST00000482098 NCOA2Q15596 1464 aa11.27□□□□□ -0.6
LINC00888-203ENST00000482098 ABCC3O15438 1527 aa11.27□□□□□ -0.61
LINC00888-203ENST00000482098 PPP1R12CQ9BZL4 782 aa11.27□□□□□ -0.61
LINC00888-203ENST00000482098 AMOTL2Q9Y2J4 779 aa11.27□□□□□ -0.61
LINC00888-203ENST00000482098 PCDHB15Q9Y5E8 787 aa11.27□□□□□ -0.61
LINC00888-203ENST00000482098 FGD6Q6ZV73 1430 aa11.26□□□□□ -0.61
LINC00888-203ENST00000482098 CDK12Q9NYV4 1490 aaPredicted RBP11.26□□□□□ -0.61
LINC00888-203ENST00000482098 NDUFV2P19404 249 aa11.26□□□□□ -0.61
LINC00888-203ENST00000482098 ZNF454Q8N9F8 522 aa11.26□□□□□ -0.61
LINC00888-203ENST00000482098 SLAIN2Q9P270 581 aa11.26□□□□□ -0.61
LINC00888-203ENST00000482098 TMEM2Q9UHN6 1383 aa11.26□□□□□ -0.61
LINC00888-203ENST00000482098 ARHGAP31Q2M1Z3 1444 aa11.26□□□□□ -0.61
LINC00888-203ENST00000482098 CAMSAP2Q08AD1 1489 aa11.25□□□□□ -0.61
LINC00888-203ENST00000482098 TIAM1Q13009 1591 aa11.25□□□□□ -0.61
LINC00888-203ENST00000482098 ROBO1Q9Y6N7 1651 aa11.25□□□□□ -0.61
LINC00888-203ENST00000482098 SRPK2P78362 688 aaKnown RBP11.25□□□□□ -0.61
LINC00888-203ENST00000482098 ADAMTS19Q8TE59 1207 aa11.25□□□□□ -0.61
LINC00888-203ENST00000482098 ZBTB3Q9H5J0 574 aa11.25□□□□□ -0.61
LINC00888-203ENST00000482098 XIRP1Q702N8 1843 aaKnown RBP11.25□□□□□ -0.61
LINC00888-203ENST00000482098 UBR1Q8IWV7 1749 aa11.24□□□□□ -0.61
LINC00888-203ENST00000482098 RXRBP28702 533 aa11.24□□□□□ -0.61
LINC00888-203ENST00000482098 GJD4Q96KN9 370 aaPredicted RBP11.24□□□□□ -0.61
LINC00888-203ENST00000482098 COLQQ9Y215 455 aaPredicted RBP11.24□□□□□ -0.61
LINC00888-203ENST00000482098 IVNS1ABPQ9Y6Y0 642 aa11.24□□□□□ -0.61
LINC00888-203ENST00000482098 MSH6P52701 1360 aa11.24□□□□□ -0.61
LINC00888-203ENST00000482098 PRDM15P57071 1507 aaPredicted RBP11.24□□□□□ -0.61
LINC00888-203ENST00000482098 CABLES1Q8TDN4 633 aa11.23□□□□□ -0.61
LINC00888-203ENST00000482098 NKTRP30414 1462 aaKnown RBP11.23□□□□□ -0.61
LINC00888-203ENST00000482098 MAP3K1Q13233 1512 aa11.23□□□□□ -0.61
LINC00888-203ENST00000482098 SETD1AO15047 1707 aaKnown RBP11.23□□□□□ -0.61
LINC00888-203ENST00000482098 DNAJB2P25686 324 aa11.22□□□□□ -0.61
LINC00888-203ENST00000482098 LMOD1P29536 600 aaPredicted RBP11.22□□□□□ -0.61
LINC00888-203ENST00000482098 SND1Q7KZF4 910 aaKnown RBP eCLIP11.22□□□□□ -0.61
LINC00888-203ENST00000482098 EHBP1L1Q8N3D4 1523 aa11.22□□□□□ -0.61
LINC00888-203ENST00000482098 EYA1Q99502 592 aa11.22□□□□□ -0.61
LINC00888-203ENST00000482098 VRTNQ9H8Y1 702 aa11.22□□□□□ -0.61
LINC00888-203ENST00000482098 NCOA3Q9Y6Q9 1424 aa11.22□□□□□ -0.61
LINC00888-203ENST00000482098 ARHGEF5Q12774 1597 aa11.21□□□□□ -0.61
LINC00888-203ENST00000482098 PALM3A6NDB9 673 aaPredicted RBP11.21□□□□□ -0.61
LINC00888-203ENST00000482098 IGSF3O75054 1194 aa11.2□□□□□ -0.62
LINC00888-203ENST00000482098 USP46P62068 366 aa11.2□□□□□ -0.62
LINC00888-203ENST00000482098 VAC14Q08AM6 782 aa11.2□□□□□ -0.62
LINC00888-203ENST00000482098 MEX3CQ5U5Q3 659 aaKnown RBP11.2□□□□□ -0.62
LINC00888-203ENST00000482098 TRIM52Q96A61 297 aa11.2□□□□□ -0.62
LINC00888-203ENST00000482098 ADAM33Q9BZ11 813 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms