RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 RRP7AQ9Y3A4 280 aaKnown RBP15.26■□□□□ 0.03
GGPS1-205ENST00000482013 DMRT2Q9Y5R5 561 aa15.26■□□□□ 0.03
GGPS1-205ENST00000482013 MSH6P52701 1360 aa15.25■□□□□ 0.03
GGPS1-205ENST00000482013 PHRF1Q9P1Y6 1649 aaKnown RBP15.25■□□□□ 0.03
GGPS1-205ENST00000482013 XIRP1Q702N8 1843 aaKnown RBP15.25■□□□□ 0.03
GGPS1-205ENST00000482013 PAK3O75914 559 aaPredicted RBP15.25■□□□□ 0.03
GGPS1-205ENST00000482013 CT47B1P0C2W7 299 aaPredicted RBP15.25■□□□□ 0.03
GGPS1-205ENST00000482013 RIPK4P57078 832 aa15.25■□□□□ 0.03
GGPS1-205ENST00000482013 IRX6P78412 446 aaPredicted RBP15.25■□□□□ 0.03
GGPS1-205ENST00000482013 NFE2L2Q16236 605 aa15.25■□□□□ 0.03
GGPS1-205ENST00000482013 ORAI2Q96SN7 254 aa15.25■□□□□ 0.03
GGPS1-205ENST00000482013 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
GGPS1-205ENST00000482013 ARHGEF10O15013 1369 aa15.24■□□□□ 0.03
GGPS1-205ENST00000482013 AMPHP49418 695 aa15.24■□□□□ 0.03
GGPS1-205ENST00000482013 CALD1Q05682 793 aaKnown RBP15.24■□□□□ 0.03
GGPS1-205ENST00000482013 LMOD3Q0VAK6 560 aa15.24■□□□□ 0.03
GGPS1-205ENST00000482013 TRIM35Q9UPQ4 493 aa15.24■□□□□ 0.03
GGPS1-205ENST00000482013 SLIT3O75094 1523 aa15.22■□□□□ 0.03
GGPS1-205ENST00000482013 FOXO3O43524 673 aa15.22■□□□□ 0.03
GGPS1-205ENST00000482013 HMOX1P09601 288 aa15.22■□□□□ 0.03
GGPS1-205ENST00000482013 HSP90AB2PQ58FF8 381 aa15.22■□□□□ 0.03
GGPS1-205ENST00000482013 KRT28Q7Z3Y7 464 aa15.22■□□□□ 0.03
GGPS1-205ENST00000482013 NFAT5O94916 1531 aa15.22■□□□□ 0.03
GGPS1-205ENST00000482013 LTN1O94822 1766 aa15.21■□□□□ 0.03
GGPS1-205ENST00000482013 HOXC9P31274 260 aa15.21■□□□□ 0.03
GGPS1-205ENST00000482013 ALS2Q96Q42 1657 aa15.21■□□□□ 0.03
GGPS1-205ENST00000482013 DLG5Q8TDM6 1919 aa15.21■□□□□ 0.02
GGPS1-205ENST00000482013 IP6K1Q92551 441 aa15.2■□□□□ 0.02
GGPS1-205ENST00000482013 KDRP35968 1356 aa15.2■□□□□ 0.02
GGPS1-205ENST00000482013 USP19O94966 1318 aa15.19■□□□□ 0.02
GGPS1-205ENST00000482013 NPHP3Q7Z494 1330 aa15.19■□□□□ 0.02
GGPS1-205ENST00000482013 IGSF1Q8N6C5 1336 aa15.19■□□□□ 0.02
GGPS1-205ENST00000482013 SULT6B1Q6IMI4 303 aa15.19■□□□□ 0.02
GGPS1-205ENST00000482013 PHACTR3Q96KR7 559 aa15.19■□□□□ 0.02
GGPS1-205ENST00000482013 NUTM2GQ5VZR2 741 aa15.18■□□□□ 0.02
GGPS1-205ENST00000482013 SOX12O15370 315 aa15.17■□□□□ 0.02
GGPS1-205ENST00000482013 EYA1Q99502 592 aa15.16■□□□□ 0.02
GGPS1-205ENST00000482013 FANCIQ9NVI1 1328 aa15.16■□□□□ 0.02
GGPS1-205ENST00000482013 GCP02774 474 aa15.15■□□□□ 0.02
GGPS1-205ENST00000482013 GNAI1P63096 354 aa15.15■□□□□ 0.02
GGPS1-205ENST00000482013 ARHGEF25Q86VW2 580 aa15.15■□□□□ 0.02
GGPS1-205ENST00000482013 ZNF428Q96B54 188 aa15.15■□□□□ 0.02
GGPS1-205ENST00000482013 IFT57Q9NWB7 429 aa15.15■□□□□ 0.02
GGPS1-205ENST00000482013 RARSP54136 660 aaKnown RBP15.14■□□□□ 0.01
GGPS1-205ENST00000482013 PDE3AQ14432 1141 aa15.14■□□□□ 0.01
GGPS1-205ENST00000482013 ZNF335Q9H4Z2 1342 aaPredicted RBP15.14■□□□□ 0.01
GGPS1-205ENST00000482013 HTATSF1O43719 755 aaKnown RBP15.13■□□□□ 0.01
GGPS1-205ENST00000482013 ZNF853P0CG23 659 aa15.13■□□□□ 0.01
GGPS1-205ENST00000482013 AEBP1Q8IUX7 1158 aa15.13■□□□□ 0.01
GGPS1-205ENST00000482013 GAS2L2Q8NHY3 880 aa15.13■□□□□ 0.01
GGPS1-205ENST00000482013 PXDNQ92626 1479 aa15.13■□□□□ 0.01
GGPS1-205ENST00000482013 ABCC6O95255 1503 aa15.12■□□□□ 0.01
GGPS1-205ENST00000482013 TNS3Q68CZ2 1445 aa15.12■□□□□ 0.01
GGPS1-205ENST00000482013 EXOC6Q8TAG9 804 aa15.12■□□□□ 0.01
GGPS1-205ENST00000482013 CCDC136Q96JN2 1154 aa15.12■□□□□ 0.01
GGPS1-205ENST00000482013 MED1Q15648 1581 aaPredicted RBP15.11■□□□□ 0.01
GGPS1-205ENST00000482013 PLIN1O60240 522 aa15.11■□□□□ 0.01
GGPS1-205ENST00000482013 XPCQ01831 940 aaPredicted RBP15.11■□□□□ 0.01
GGPS1-205ENST00000482013 CFAP44Q96MT7 982 aa15.11■□□□□ 0.01
GGPS1-205ENST00000482013 BCAR3O75815 825 aa15.1■□□□□ 0.01
GGPS1-205ENST00000482013 MS4A1P11836 297 aa15.1■□□□□ 0.01
GGPS1-205ENST00000482013 EXOSC9Q06265 439 aaKnown RBP15.1■□□□□ 0.01
GGPS1-205ENST00000482013 AAMPQ13685 434 aa15.1■□□□□ 0.01
GGPS1-205ENST00000482013 BRINP3Q76B58 766 aa15.1■□□□□ 0.01
GGPS1-205ENST00000482013 SLAIN2Q9P270 581 aa15.1■□□□□ 0.01
GGPS1-205ENST00000482013 SPATA31A3Q5VYP0 1347 aa15.1■□□□□ 0.01
GGPS1-205ENST00000482013 NCAPD2Q15021 1401 aa15.09■□□□□ 0.01
GGPS1-205ENST00000482013 ALDH1L2Q3SY69 923 aa15.09■□□□□ 0.01
GGPS1-205ENST00000482013 LMOD2Q6P5Q4 547 aa15.09■□□□□ 0.01
GGPS1-205ENST00000482013 TSR2Q969E8 191 aaKnown RBP15.09■□□□□ 0.01
GGPS1-205ENST00000482013 CAMTA1Q9Y6Y1 1673 aa15.09■□□□□ 0.01
GGPS1-205ENST00000482013 BRPF1P55201 1214 aaPredicted RBP15.08■□□□□ 0
GGPS1-205ENST00000482013 B4GALNT3Q6L9W6 998 aa15.08■□□□□ 0
GGPS1-205ENST00000482013 CRBNQ96SW2 442 aa15.08■□□□□ 0
GGPS1-205ENST00000482013 CRYBG1Q9Y4K1 1723 aa15.08■□□□□ 0
GGPS1-205ENST00000482013 HAP1P54257 671 aaPredicted RBP15.07■□□□□ 0
GGPS1-205ENST00000482013 MTHFSDQ2M296 383 aaKnown RBP15.07■□□□□ 0
GGPS1-205ENST00000482013 RTF1Q92541 710 aaKnown RBP15.07■□□□□ 0
GGPS1-205ENST00000482013 SOS2Q07890 1332 aaPredicted RBP15.07■□□□□ 0
GGPS1-205ENST00000482013 PLEKHG2Q9H7P9 1386 aa15.06■□□□□ 0
GGPS1-205ENST00000482013 COL18A1P39060 1754 aa15.06■□□□□ 0
GGPS1-205ENST00000482013 CHL1O00533 1208 aa15.05■□□□□ -0
GGPS1-205ENST00000482013 CANXP27824 592 aaKnown RBP15.05■□□□□ -0
GGPS1-205ENST00000482013 C20orf194Q5TEA3 1177 aa15.05■□□□□ -0
GGPS1-205ENST00000482013 LTV1Q96GA3 475 aaPredicted RBP15.05■□□□□ -0
GGPS1-205ENST00000482013 MBIPQ9NS73 344 aa15.05■□□□□ -0
GGPS1-205ENST00000482013 BABAM1Q9NWV8 329 aa15.05■□□□□ -0
GGPS1-205ENST00000482013 CPDO75976 1380 aa15.05■□□□□ -0
GGPS1-205ENST00000482013 NHSL1Q5SYE7 1610 aa15.05■□□□□ -0
GGPS1-205ENST00000482013 FAM208AQ9UK61 1670 aaKnown RBP15.05■□□□□ -0
GGPS1-205ENST00000482013 RGPD2P0DJD1 1756 aa15.04■□□□□ -0
GGPS1-205ENST00000482013 CRB1P82279 1406 aa15.04■□□□□ -0
GGPS1-205ENST00000482013 NBPF6Q5VWK0 638 aa15.04■□□□□ -0
GGPS1-205ENST00000482013 NBPF4Q96M43 638 aa15.04■□□□□ -0
GGPS1-205ENST00000482013 LAS1LQ9Y4W2 734 aaKnown RBP15.04■□□□□ -0
GGPS1-205ENST00000482013 RGPD5Q99666 1765 aa15.03■□□□□ -0
GGPS1-205ENST00000482013 LRRC37A3O60309 1634 aa15.03■□□□□ -0
GGPS1-205ENST00000482013 KIAA0232Q92628 1395 aa15.03■□□□□ -0
GGPS1-205ENST00000482013 KIF16BQ96L93 1317 aa15.03■□□□□ -0
GGPS1-205ENST00000482013 FAM83GA6ND36 823 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms