RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 CABP1Q9NZU7 370 aa17.73■□□□□ 0.43
CCDC78-211ENST00000481804 KIDINS220Q9ULH0 1771 aa17.72■□□□□ 0.43
CCDC78-211ENST00000481804 RABEP1Q15276 862 aa17.72■□□□□ 0.43
CCDC78-211ENST00000481804 TWISTNBQ3B726 338 aaPredicted RBP17.72■□□□□ 0.43
CCDC78-211ENST00000481804 NFE2L2Q16236 605 aa17.72■□□□□ 0.43
CCDC78-211ENST00000481804 KIAA1211Q6ZU35 1233 aa17.72■□□□□ 0.43
CCDC78-211ENST00000481804 PPLO60437 1756 aa17.71■□□□□ 0.43
CCDC78-211ENST00000481804 ZSCAN30Q86W11 494 aa17.71■□□□□ 0.43
CCDC78-211ENST00000481804 PHACTR3Q96KR7 559 aa17.71■□□□□ 0.43
CCDC78-211ENST00000481804 NUCB2P80303 420 aa17.71■□□□□ 0.43
CCDC78-211ENST00000481804 TPM2P07951 284 aa17.7■□□□□ 0.42
CCDC78-211ENST00000481804 SIRT2Q8IXJ6 389 aa17.7■□□□□ 0.42
CCDC78-211ENST00000481804 ARHGAP45Q92619 1136 aa17.7■□□□□ 0.42
CCDC78-211ENST00000481804 API5Q9BZZ5 524 aaKnown RBP17.7■□□□□ 0.42
CCDC78-211ENST00000481804 LMTK2Q8IWU2 1503 aa17.7■□□□□ 0.42
CCDC78-211ENST00000481804 CASC1Q6TDU7 716 aa17.7■□□□□ 0.42
CCDC78-211ENST00000481804 IDI1Q13907 227 aa17.7■□□□□ 0.42
CCDC78-211ENST00000481804 CYB5RLQ6IPT4 315 aa17.7■□□□□ 0.42
CCDC78-211ENST00000481804 CFAP44Q96MT7 982 aa17.69■□□□□ 0.42
CCDC78-211ENST00000481804 CDK19Q9BWU1 502 aa17.69■□□□□ 0.42
CCDC78-211ENST00000481804 MBIPQ9NS73 344 aa17.69■□□□□ 0.42
CCDC78-211ENST00000481804 CFAP74Q9C0B2 1584 aa17.69■□□□□ 0.42
CCDC78-211ENST00000481804 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
CCDC78-211ENST00000481804 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
CCDC78-211ENST00000481804 GSPT1P15170 499 aaKnown RBP17.68■□□□□ 0.42
CCDC78-211ENST00000481804 INTS3Q68E01 1043 aaKnown RBP17.67■□□□□ 0.42
CCDC78-211ENST00000481804 ST18O60284 1047 aa17.67■□□□□ 0.42
CCDC78-211ENST00000481804 PLEKHM2Q8IWE5 1019 aa17.67■□□□□ 0.42
CCDC78-211ENST00000481804 PKNOX2Q96KN3 472 aa17.67■□□□□ 0.42
CCDC78-211ENST00000481804 IFT57Q9NWB7 429 aa17.67■□□□□ 0.42
CCDC78-211ENST00000481804 BRPF1P55201 1214 aaPredicted RBP17.66■□□□□ 0.42
CCDC78-211ENST00000481804 POLKQ9UBT6 870 aa17.66■□□□□ 0.42
CCDC78-211ENST00000481804 PRPF40AO75400 957 aaKnown RBP17.66■□□□□ 0.42
CCDC78-211ENST00000481804 FOXD4L5Q5VV16 416 aaPredicted RBP17.66■□□□□ 0.42
CCDC78-211ENST00000481804 C16orf71Q8IYS4 520 aaPredicted RBP17.66■□□□□ 0.42
CCDC78-211ENST00000481804 FOXD4L4Q8WXT5 416 aaPredicted RBP17.66■□□□□ 0.42
CCDC78-211ENST00000481804 PPP1R9BQ96SB3 815 aa17.66■□□□□ 0.42
CCDC78-211ENST00000481804 C8orf58Q8NAV2 365 aa17.65■□□□□ 0.42
CCDC78-211ENST00000481804 ARHGEF28Q8N1W1 1705 aaKnown RBP17.65■□□□□ 0.42
CCDC78-211ENST00000481804 MED14O60244 1454 aa17.65■□□□□ 0.42
CCDC78-211ENST00000481804 ZSCAN23Q3MJ62 389 aa17.64■□□□□ 0.42
CCDC78-211ENST00000481804 TTC22Q5TAA0 569 aa17.64■□□□□ 0.42
CCDC78-211ENST00000481804 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.64■□□□□ 0.42
CCDC78-211ENST00000481804 ZMYND15Q9H091 742 aa17.64■□□□□ 0.42
CCDC78-211ENST00000481804 EMILIN1Q9Y6C2 1016 aa17.64■□□□□ 0.42
CCDC78-211ENST00000481804 ABCC4O15439 1325 aa17.64■□□□□ 0.42
CCDC78-211ENST00000481804 LMOD3Q0VAK6 560 aa17.64■□□□□ 0.41
CCDC78-211ENST00000481804 PKP1Q13835 747 aa17.64■□□□□ 0.41
CCDC78-211ENST00000481804 LRRC7Q96NW7 1537 aa17.63■□□□□ 0.41
CCDC78-211ENST00000481804 AK9Q5TCS8 1911 aa17.63■□□□□ 0.41
CCDC78-211ENST00000481804 DCTN1Q14203 1278 aa17.63■□□□□ 0.41
CCDC78-211ENST00000481804 CAMSAP1Q5T5Y3 1602 aa17.63■□□□□ 0.41
CCDC78-211ENST00000481804 ZFYVE9O95405 1425 aa17.63■□□□□ 0.41
CCDC78-211ENST00000481804 FAM83GA6ND36 823 aa17.62■□□□□ 0.41
CCDC78-211ENST00000481804 PTCH1Q13635 1447 aa17.62■□□□□ 0.41
CCDC78-211ENST00000481804 PNPLA6Q8IY17 1366 aa17.62■□□□□ 0.41
CCDC78-211ENST00000481804 OTUD7AQ8TE49 926 aaPredicted RBP17.62■□□□□ 0.41
CCDC78-211ENST00000481804 USP26Q9BXU7 913 aa17.62■□□□□ 0.41
CCDC78-211ENST00000481804 R3HCC1Q9Y3T6 440 aaKnown RBP17.62■□□□□ 0.41
CCDC78-211ENST00000481804 POGZQ7Z3K3 1410 aa17.62■□□□□ 0.41
CCDC78-211ENST00000481804 SMARCA5O60264 1052 aaPredicted RBP17.62■□□□□ 0.41
CCDC78-211ENST00000481804 ZGPATQ8N5A5 531 aaKnown RBP17.61■□□□□ 0.41
CCDC78-211ENST00000481804 DCTPP1Q9H773 170 aa17.61■□□□□ 0.41
CCDC78-211ENST00000481804 RBM27Q9P2N5 1060 aaKnown RBP17.61■□□□□ 0.41
CCDC78-211ENST00000481804 FAM135BQ49AJ0 1406 aa17.61■□□□□ 0.41
CCDC78-211ENST00000481804 CLEC17AQ6ZS10 378 aa17.61■□□□□ 0.41
CCDC78-211ENST00000481804 CWC22Q9HCG8 908 aaKnown RBP17.61■□□□□ 0.41
CCDC78-211ENST00000481804 LMBRD1Q9NUN5 540 aa17.61■□□□□ 0.41
CCDC78-211ENST00000481804 REC8O95072 547 aa17.6■□□□□ 0.41
CCDC78-211ENST00000481804 ZNF445P59923 1031 aa17.6■□□□□ 0.41
CCDC78-211ENST00000481804 IBTKQ9P2D0 1353 aaPredicted RBP17.6■□□□□ 0.41
CCDC78-211ENST00000481804 ABCC3O15438 1527 aa17.6■□□□□ 0.41
CCDC78-211ENST00000481804 OFD1O75665 1012 aa17.6■□□□□ 0.41
CCDC78-211ENST00000481804 RBM10P98175 930 aaKnown RBP17.6■□□□□ 0.41
CCDC78-211ENST00000481804 SLC52A1Q9NWF4 448 aa17.6■□□□□ 0.41
CCDC78-211ENST00000481804 FRMPD1Q5SYB0 1578 aa17.6■□□□□ 0.41
CCDC78-211ENST00000481804 SDSP20132 328 aa17.6■□□□□ 0.41
CCDC78-211ENST00000481804 PRIM1P49642 420 aaKnown RBP17.6■□□□□ 0.41
CCDC78-211ENST00000481804 RBSNQ9H1K0 784 aa17.6■□□□□ 0.41
CCDC78-211ENST00000481804 PIK3R4Q99570 1358 aa17.6■□□□□ 0.41
CCDC78-211ENST00000481804 NEXMIFQ5QGS0 1516 aa17.58■□□□□ 0.41
CCDC78-211ENST00000481804 PDCL3Q9H2J4 239 aa17.58■□□□□ 0.4
CCDC78-211ENST00000481804 FAM13BQ9NYF5 915 aa17.58■□□□□ 0.4
CCDC78-211ENST00000481804 YTHDC2Q9H6S0 1430 aaKnown RBP17.58■□□□□ 0.4
CCDC78-211ENST00000481804 XPCQ01831 940 aaPredicted RBP17.57■□□□□ 0.4
CCDC78-211ENST00000481804 NOL8Q76FK4 1167 aaKnown RBP17.57■□□□□ 0.4
CCDC78-211ENST00000481804 PTMAP06454 111 aaKnown RBP17.57■□□□□ 0.4
CCDC78-211ENST00000481804 WAPLQ7Z5K2 1190 aa17.57■□□□□ 0.4
CCDC78-211ENST00000481804 RNF214Q8ND24 703 aa17.57■□□□□ 0.4
CCDC78-211ENST00000481804 YEATS2Q9ULM3 1422 aa17.57■□□□□ 0.4
CCDC78-211ENST00000481804 SYCE3A1L190 88 aa17.57■□□□□ 0.4
CCDC78-211ENST00000481804 RRS1Q15050 365 aaKnown RBP17.57■□□□□ 0.4
CCDC78-211ENST00000481804 FBXO31Q5XUX0 539 aaPredicted RBP17.57■□□□□ 0.4
CCDC78-211ENST00000481804 NME9Q86XW9 330 aa17.57■□□□□ 0.4
CCDC78-211ENST00000481804 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
CCDC78-211ENST00000481804 CHAMP1Q96JM3 812 aa17.57■□□□□ 0.4
CCDC78-211ENST00000481804 CD163L1Q9NR16 1453 aa17.56■□□□□ 0.4
CCDC78-211ENST00000481804 ZNF853P0CG23 659 aa17.56■□□□□ 0.4
CCDC78-211ENST00000481804 RPAP2Q8IXW5 612 aaPredicted RBP17.56■□□□□ 0.4
CCDC78-211ENST00000481804 NEK4P51957 841 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms