RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 PRKAR2BP31323 418 aa21.66■■□□□ 1.06
SH3D21-203ENST00000480549 RIPK4P57078 832 aa21.66■■□□□ 1.06
SH3D21-203ENST00000480549 USP31Q70CQ4 1352 aa21.65■■□□□ 1.06
SH3D21-203ENST00000480549 GLIPR1L2Q4G1C9 344 aa21.65■■□□□ 1.06
SH3D21-203ENST00000480549 PMFBP1Q8TBY8 1022 aa21.65■■□□□ 1.06
SH3D21-203ENST00000480549 IL16Q14005 1332 aa21.64■■□□□ 1.06
SH3D21-203ENST00000480549 PIK3C2AO00443 1686 aa21.64■■□□□ 1.06
SH3D21-203ENST00000480549 HMOX1P09601 288 aa21.63■■□□□ 1.05
SH3D21-203ENST00000480549 TTC21AQ8NDW8 1320 aa21.63■■□□□ 1.05
SH3D21-203ENST00000480549 DLG5Q8TDM6 1919 aa21.62■■□□□ 1.05
SH3D21-203ENST00000480549 PDE3AQ14432 1141 aa21.62■■□□□ 1.05
SH3D21-203ENST00000480549 PHACTR3Q96KR7 559 aa21.62■■□□□ 1.05
SH3D21-203ENST00000480549 TSR2Q969E8 191 aaKnown RBP21.62■■□□□ 1.05
SH3D21-203ENST00000480549 KDM2BQ8NHM5 1336 aa21.62■■□□□ 1.05
SH3D21-203ENST00000480549 RGPD1P0DJD0 1748 aa21.61■■□□□ 1.05
SH3D21-203ENST00000480549 MARF1Q9Y4F3 1742 aaKnown RBP21.61■■□□□ 1.05
SH3D21-203ENST00000480549 USP35Q9P2H5 1018 aa21.6■■□□□ 1.05
SH3D21-203ENST00000480549 USP54Q70EL1 1684 aa21.59■■□□□ 1.05
SH3D21-203ENST00000480549 NFE2L2Q16236 605 aa21.58■■□□□ 1.05
SH3D21-203ENST00000480549 NGDNQ8NEJ9 315 aaKnown RBP21.58■■□□□ 1.05
SH3D21-203ENST00000480549 CT47B1P0C2W7 299 aaPredicted RBP21.58■■□□□ 1.05
SH3D21-203ENST00000480549 NPHP4O75161 1426 aaPredicted RBP21.57■■□□□ 1.04
SH3D21-203ENST00000480549 EXOSC9Q06265 439 aaKnown RBP21.56■■□□□ 1.04
SH3D21-203ENST00000480549 EIF4A2Q14240 407 aaKnown RBP21.56■■□□□ 1.04
SH3D21-203ENST00000480549 PANK1Q8TE04 598 aa21.56■■□□□ 1.04
SH3D21-203ENST00000480549 CANXP27824 592 aaKnown RBP21.55■■□□□ 1.04
SH3D21-203ENST00000480549 BCL2L13Q9BXK5 485 aa21.55■■□□□ 1.04
SH3D21-203ENST00000480549 GSE1Q14687 1217 aa21.55■■□□□ 1.04
SH3D21-203ENST00000480549 FRAT1Q92837 279 aaPredicted RBP21.55■■□□□ 1.04
SH3D21-203ENST00000480549 CENPQQ7L2Z9 268 aaPredicted RBP21.54■■□□□ 1.04
SH3D21-203ENST00000480549 TCERG1O14776 1098 aaKnown RBP21.53■■□□□ 1.04
SH3D21-203ENST00000480549 ADGRL3Q9HAR2 1447 aa21.53■■□□□ 1.04
SH3D21-203ENST00000480549 TNNQ9UQP3 1299 aa21.52■■□□□ 1.04
SH3D21-203ENST00000480549 NWD1Q149M9 1564 aa21.52■■□□□ 1.04
SH3D21-203ENST00000480549 HSP90AB2PQ58FF8 381 aa21.52■■□□□ 1.04
SH3D21-203ENST00000480549 COG6Q9Y2V7 657 aa21.52■■□□□ 1.04
SH3D21-203ENST00000480549 MAP3K19Q56UN5 1328 aa21.52■■□□□ 1.03
SH3D21-203ENST00000480549 RLBP1P12271 317 aa21.51■■□□□ 1.03
SH3D21-203ENST00000480549 AEBP1Q8IUX7 1158 aa21.5■■□□□ 1.03
SH3D21-203ENST00000480549 RBM33Q96EV2 1170 aaKnown RBP21.5■■□□□ 1.03
SH3D21-203ENST00000480549 SBNO1A3KN83 1393 aa21.49■■□□□ 1.03
SH3D21-203ENST00000480549 SOX12O15370 315 aa21.49■■□□□ 1.03
SH3D21-203ENST00000480549 SKAP1Q86WV1 359 aa21.49■■□□□ 1.03
SH3D21-203ENST00000480549 THUMPD2Q9BTF0 503 aaKnown RBP21.49■■□□□ 1.03
SH3D21-203ENST00000480549 FLT4P35916 1363 aa21.48■■□□□ 1.03
SH3D21-203ENST00000480549 SULT6B1Q6IMI4 303 aa21.48■■□□□ 1.03
SH3D21-203ENST00000480549 SSH1Q8WYL5 1049 aa21.48■■□□□ 1.03
SH3D21-203ENST00000480549 CLUAP1Q96AJ1 413 aa21.47■■□□□ 1.03
SH3D21-203ENST00000480549 MS4A1P11836 297 aa21.47■■□□□ 1.03
SH3D21-203ENST00000480549 ZNF853P0CG23 659 aa21.46■■□□□ 1.03
SH3D21-203ENST00000480549 CALD1Q05682 793 aaKnown RBP21.46■■□□□ 1.03
SH3D21-203ENST00000480549 SMC4Q9NTJ3 1288 aa21.46■■□□□ 1.03
SH3D21-203ENST00000480549 PHF8Q9UPP1 1060 aa21.46■■□□□ 1.03
SH3D21-203ENST00000480549 ARHGEF10O15013 1369 aa21.45■■□□□ 1.02
SH3D21-203ENST00000480549 ZKSCAN2Q63HK3 967 aa21.45■■□□□ 1.02
SH3D21-203ENST00000480549 IFT57Q9NWB7 429 aa21.45■■□□□ 1.02
SH3D21-203ENST00000480549 NLRP6P59044 892 aa21.45■■□□□ 1.02
SH3D21-203ENST00000480549 LMOD3Q0VAK6 560 aa21.45■■□□□ 1.02
SH3D21-203ENST00000480549 IGHDP01880 384 aa21.43■■□□□ 1.02
SH3D21-203ENST00000480549 GNAI1P63096 354 aa21.43■■□□□ 1.02
SH3D21-203ENST00000480549 AAMPQ13685 434 aa21.43■■□□□ 1.02
SH3D21-203ENST00000480549 FAM83GA6ND36 823 aa21.42■■□□□ 1.02
SH3D21-203ENST00000480549 LTN1O94822 1766 aa21.41■■□□□ 1.02
SH3D21-203ENST00000480549 ALDH1L2Q3SY69 923 aa21.41■■□□□ 1.02
SH3D21-203ENST00000480549 NUTM2GQ5VZR2 741 aa21.41■■□□□ 1.02
SH3D21-203ENST00000480549 MBIPQ9NS73 344 aa21.41■■□□□ 1.02
SH3D21-203ENST00000480549 KDRP35968 1356 aa21.41■■□□□ 1.02
SH3D21-203ENST00000480549 KIF24Q5T7B8 1368 aa21.41■■□□□ 1.02
SH3D21-203ENST00000480549 TRIM27P14373 513 aa21.41■■□□□ 1.02
SH3D21-203ENST00000480549 ABTB2Q8N961 1025 aa21.41■■□□□ 1.02
SH3D21-203ENST00000480549 MVPQ14764 893 aaKnown RBP21.4■■□□□ 1.02
SH3D21-203ENST00000480549 DZIP1LQ8IYY4 767 aaKnown RBP21.4■■□□□ 1.02
SH3D21-203ENST00000480549 FAM43AQ8N2R8 423 aa21.4■■□□□ 1.02
SH3D21-203ENST00000480549 CFAP44Q96MT7 982 aa21.4■■□□□ 1.02
SH3D21-203ENST00000480549 AMPHP49418 695 aa21.4■■□□□ 1.02
SH3D21-203ENST00000480549 PDE4AP27815 886 aa21.39■■□□□ 1.02
SH3D21-203ENST00000480549 DCTN1Q14203 1278 aa21.39■■□□□ 1.02
SH3D21-203ENST00000480549 ZNF428Q96B54 188 aa21.39■■□□□ 1.02
SH3D21-203ENST00000480549 IGSF1Q8N6C5 1336 aa21.39■■□□□ 1.01
SH3D21-203ENST00000480549 ATF7IPQ6VMQ6 1270 aa21.39■■□□□ 1.01
SH3D21-203ENST00000480549 NOB1Q9ULX3 412 aaKnown RBP21.39■■□□□ 1.01
SH3D21-203ENST00000480549 NFAT5O94916 1531 aa21.38■■□□□ 1.01
SH3D21-203ENST00000480549 VAMP4O75379 141 aa21.38■■□□□ 1.01
SH3D21-203ENST00000480549 BACH2Q9BYV9 841 aa21.38■■□□□ 1.01
SH3D21-203ENST00000480549 DAXXQ9UER7 740 aaPredicted RBP21.38■■□□□ 1.01
SH3D21-203ENST00000480549 BRPF1P55201 1214 aaPredicted RBP21.38■■□□□ 1.01
SH3D21-203ENST00000480549 KIF16BQ96L93 1317 aa21.37■■□□□ 1.01
SH3D21-203ENST00000480549 ESCO1Q5FWF5 840 aa21.37■■□□□ 1.01
SH3D21-203ENST00000480549 TSPYL6Q8N831 410 aa21.37■■□□□ 1.01
SH3D21-203ENST00000480549 PCDHB15Q9Y5E8 787 aa21.37■■□□□ 1.01
SH3D21-203ENST00000480549 HOXC9P31274 260 aa21.37■■□□□ 1.01
SH3D21-203ENST00000480549 FTSJ3Q8IY81 847 aaKnown RBP21.37■■□□□ 1.01
SH3D21-203ENST00000480549 EYA1Q99502 592 aa21.37■■□□□ 1.01
SH3D21-203ENST00000480549 STRCP1A6NGW2 1772 aa21.35■■□□□ 1.01
SH3D21-203ENST00000480549 C14orf37Q86TY3 774 aa21.34■■□□□ 1.01
SH3D21-203ENST00000480549 PHRF1Q9P1Y6 1649 aaKnown RBP21.34■■□□□ 1.01
SH3D21-203ENST00000480549 RTL1A6NKG5 1358 aa21.33■■□□□ 1.01
SH3D21-203ENST00000480549 TRPM3Q9HCF6 1732 aaPredicted RBP21.33■■□□□ 1.01
SH3D21-203ENST00000480549 NFKBIBQ15653 356 aa21.33■■□□□ 1
SH3D21-203ENST00000480549 C8orf58Q8NAV2 365 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms