RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 TRAK1Q9UPV9 953 aa16.74■□□□□ 0.27
C9orf78-205ENST00000480023 SMAP1Q8IYB5 467 aaPredicted RBP16.73■□□□□ 0.27
C9orf78-205ENST00000480023 FAM13BQ9NYF5 915 aa16.73■□□□□ 0.27
C9orf78-205ENST00000480023 ANKRD26Q9UPS8 1709 aa16.73■□□□□ 0.27
C9orf78-205ENST00000480023 PRIM1P49642 420 aaKnown RBP16.72■□□□□ 0.27
C9orf78-205ENST00000480023 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
C9orf78-205ENST00000480023 XPCQ01831 940 aaPredicted RBP16.72■□□□□ 0.27
C9orf78-205ENST00000480023 UHRF1BP1LA0JNW5 1464 aa16.72■□□□□ 0.27
C9orf78-205ENST00000480023 ARHGEF28Q8N1W1 1705 aaKnown RBP16.71■□□□□ 0.27
C9orf78-205ENST00000480023 EVC2Q86UK5 1308 aa16.71■□□□□ 0.27
C9orf78-205ENST00000480023 KIF3BO15066 747 aa16.7■□□□□ 0.26
C9orf78-205ENST00000480023 CCDC39Q9UFE4 941 aa16.7■□□□□ 0.26
C9orf78-205ENST00000480023 GLI2P10070 1586 aa16.7■□□□□ 0.26
C9orf78-205ENST00000480023 YEATS2Q9ULM3 1422 aa16.7■□□□□ 0.26
C9orf78-205ENST00000480023 SASS6Q6UVJ0 657 aa16.7■□□□□ 0.26
C9orf78-205ENST00000480023 LRSAM1Q6UWE0 723 aa16.7■□□□□ 0.26
C9orf78-205ENST00000480023 SIRT2Q8IXJ6 389 aa16.7■□□□□ 0.26
C9orf78-205ENST00000480023 U2SURPO15042 1029 aaKnown RBP16.69■□□□□ 0.26
C9orf78-205ENST00000480023 GSPT1P15170 499 aaKnown RBP16.69■□□□□ 0.26
C9orf78-205ENST00000480023 GPT2Q8TD30 523 aa16.69■□□□□ 0.26
C9orf78-205ENST00000480023 ABCC4O15439 1325 aa16.69■□□□□ 0.26
C9orf78-205ENST00000480023 PNPLA6Q8IY17 1366 aa16.69■□□□□ 0.26
C9orf78-205ENST00000480023 ABCA9Q8IUA7 1624 aa16.68■□□□□ 0.26
C9orf78-205ENST00000480023 USP26Q9BXU7 913 aa16.68■□□□□ 0.26
C9orf78-205ENST00000480023 NCLP19338 710 aaKnown RBP16.67■□□□□ 0.26
C9orf78-205ENST00000480023 PKP1Q13835 747 aa16.67■□□□□ 0.26
C9orf78-205ENST00000480023 CHD1O14646 1710 aa16.67■□□□□ 0.26
C9orf78-205ENST00000480023 ERCC6L2Q5T890 1561 aa16.66■□□□□ 0.26
C9orf78-205ENST00000480023 A0A1W2PP64 1363 aa16.66■□□□□ 0.26
C9orf78-205ENST00000480023 RPGRIP1LQ68CZ1 1315 aa16.66■□□□□ 0.26
C9orf78-205ENST00000480023 PLEKHM2Q8IWE5 1019 aa16.66■□□□□ 0.26
C9orf78-205ENST00000480023 MRPL50Q8N5N7 158 aaKnown RBP16.66■□□□□ 0.26
C9orf78-205ENST00000480023 KIF24Q5T7B8 1368 aa16.66■□□□□ 0.26
C9orf78-205ENST00000480023 ZDHHC9Q9Y397 364 aa16.66■□□□□ 0.26
C9orf78-205ENST00000480023 LRRC7Q96NW7 1537 aa16.65■□□□□ 0.26
C9orf78-205ENST00000480023 PRPF40AO75400 957 aaKnown RBP16.65■□□□□ 0.26
C9orf78-205ENST00000480023 TTC22Q5TAA0 569 aa16.65■□□□□ 0.26
C9orf78-205ENST00000480023 TMEM63CQ9P1W3 806 aa16.65■□□□□ 0.26
C9orf78-205ENST00000480023 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
C9orf78-205ENST00000480023 ST18O60284 1047 aa16.64■□□□□ 0.25
C9orf78-205ENST00000480023 VAMP4O75379 141 aa16.64■□□□□ 0.25
C9orf78-205ENST00000480023 MBD3O95983 291 aa16.64■□□□□ 0.25
C9orf78-205ENST00000480023 FAM135BQ49AJ0 1406 aa16.64■□□□□ 0.25
C9orf78-205ENST00000480023 KNDC1Q76NI1 1749 aa16.63■□□□□ 0.25
C9orf78-205ENST00000480023 INTS3Q68E01 1043 aaKnown RBP16.63■□□□□ 0.25
C9orf78-205ENST00000480023 RBM27Q9P2N5 1060 aaKnown RBP16.63■□□□□ 0.25
C9orf78-205ENST00000480023 FCHSD2O94868 740 aa16.63■□□□□ 0.25
C9orf78-205ENST00000480023 ZFYVE9O95405 1425 aa16.63■□□□□ 0.25
C9orf78-205ENST00000480023 TMEM132EQ6IEE7 984 aa16.63■□□□□ 0.25
C9orf78-205ENST00000480023 DIAPH1O60610 1272 aaKnown RBP16.62■□□□□ 0.25
C9orf78-205ENST00000480023 CCDC94Q9BW85 323 aaPredicted RBP16.62■□□□□ 0.25
C9orf78-205ENST00000480023 DCTPP1Q9H773 170 aa16.62■□□□□ 0.25
C9orf78-205ENST00000480023 UTP14CQ5TAP6 766 aaKnown RBP16.61■□□□□ 0.25
C9orf78-205ENST00000480023 ASXL2Q76L83 1435 aa16.61■□□□□ 0.25
C9orf78-205ENST00000480023 SYCE3A1L190 88 aa16.61■□□□□ 0.25
C9orf78-205ENST00000480023 ZGPATQ8N5A5 531 aaKnown RBP16.61■□□□□ 0.25
C9orf78-205ENST00000480023 MYRIPQ8NFW9 859 aa16.6■□□□□ 0.25
C9orf78-205ENST00000480023 CAMSAP1Q5T5Y3 1602 aa16.6■□□□□ 0.25
C9orf78-205ENST00000480023 KIAA2012Q0VF49 1180 aa16.6■□□□□ 0.25
C9orf78-205ENST00000480023 GGNBP2Q9H3C7 697 aa16.6■□□□□ 0.25
C9orf78-205ENST00000480023 NPATQ14207 1427 aa16.59■□□□□ 0.25
C9orf78-205ENST00000480023 FYB1O15117 783 aa16.59■□□□□ 0.25
C9orf78-205ENST00000480023 CABP2Q9NPB3 220 aa16.59■□□□□ 0.25
C9orf78-205ENST00000480023 CD163L1Q9NR16 1453 aa16.59■□□□□ 0.25
C9orf78-205ENST00000480023 KIDINS220Q9ULH0 1771 aa16.58■□□□□ 0.25
C9orf78-205ENST00000480023 GTF2F1P35269 517 aaKnown RBP eCLIP16.58■□□□□ 0.25
C9orf78-205ENST00000480023 PRIMPOLQ96LW4 560 aa16.58■□□□□ 0.25
C9orf78-205ENST00000480023 API5Q9BZZ5 524 aaKnown RBP16.58■□□□□ 0.25
C9orf78-205ENST00000480023 CLTCQ00610 1675 aaKnown RBP16.58■□□□□ 0.25
C9orf78-205ENST00000480023 PIK3C2BO00750 1634 aa16.58■□□□□ 0.24
C9orf78-205ENST00000480023 IFT57Q9NWB7 429 aa16.58■□□□□ 0.24
C9orf78-205ENST00000480023 NSFL1CQ9UNZ2 370 aaKnown RBP16.58■□□□□ 0.24
C9orf78-205ENST00000480023 FRMPD1Q5SYB0 1578 aa16.58■□□□□ 0.24
C9orf78-205ENST00000480023 ZNF853P0CG23 659 aa16.57■□□□□ 0.24
C9orf78-205ENST00000480023 CASC1Q6TDU7 716 aa16.57■□□□□ 0.24
C9orf78-205ENST00000480023 ATAD2Q6PL18 1390 aa16.57■□□□□ 0.24
C9orf78-205ENST00000480023 ATP10DQ9P241 1426 aa16.57■□□□□ 0.24
C9orf78-205ENST00000480023 REC8O95072 547 aa16.57■□□□□ 0.24
C9orf78-205ENST00000480023 DMTNQ08495 405 aa16.57■□□□□ 0.24
C9orf78-205ENST00000480023 GNAI1P63096 354 aa16.56■□□□□ 0.24
C9orf78-205ENST00000480023 TSPYL6Q8N831 410 aa16.56■□□□□ 0.24
C9orf78-205ENST00000480023 TSPY26PQ9H489 355 aa16.56■□□□□ 0.24
C9orf78-205ENST00000480023 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.56■□□□□ 0.24
C9orf78-205ENST00000480023 KIF20BQ96Q89 1820 aa16.56■□□□□ 0.24
C9orf78-205ENST00000480023 NEXMIFQ5QGS0 1516 aa16.55■□□□□ 0.24
C9orf78-205ENST00000480023 BRD1O95696 1058 aa16.55■□□□□ 0.24
C9orf78-205ENST00000480023 CHGAP10645 457 aaKnown RBP16.55■□□□□ 0.24
C9orf78-205ENST00000480023 HMGN5P82970 282 aaKnown RBP16.55■□□□□ 0.24
C9orf78-205ENST00000480023 NFE2L2Q16236 605 aa16.55■□□□□ 0.24
C9orf78-205ENST00000480023 SDSP20132 328 aa16.55■□□□□ 0.24
C9orf78-205ENST00000480023 SYAP1Q96A49 352 aaPredicted RBP16.55■□□□□ 0.24
C9orf78-205ENST00000480023 TERF2IPQ9NYB0 399 aa16.55■□□□□ 0.24
C9orf78-205ENST00000480023 PRKAR2BP31323 418 aa16.54■□□□□ 0.24
C9orf78-205ENST00000480023 PIBF1Q8WXW3 757 aa16.54■□□□□ 0.24
C9orf78-205ENST00000480023 ZSCAN20P17040 1043 aaPredicted RBP16.54■□□□□ 0.24
C9orf78-205ENST00000480023 MCM2P49736 904 aa16.54■□□□□ 0.24
C9orf78-205ENST00000480023 UVSSAQ2YD98 709 aa16.54■□□□□ 0.24
C9orf78-205ENST00000480023 ANKRD44Q8N8A2 993 aa16.54■□□□□ 0.24
C9orf78-205ENST00000480023 FAM184AQ8NB25 1140 aa16.54■□□□□ 0.24
C9orf78-205ENST00000480023 HECW2Q9P2P5 1572 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms