RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 TOPAZ1Q8N9V7 1692 aa24.31■■□□□ 1.48
TNFRSF8-204ENST00000479933 BRPF1P55201 1214 aaPredicted RBP24.31■■□□□ 1.48
TNFRSF8-204ENST00000479933 LMOD3Q0VAK6 560 aa24.31■■□□□ 1.48
TNFRSF8-204ENST00000479933 NOB1Q9ULX3 412 aaKnown RBP24.29■■□□□ 1.48
TNFRSF8-204ENST00000479933 PDZRN3Q9UPQ7 1066 aa24.29■■□□□ 1.48
TNFRSF8-204ENST00000479933 FBLN1P23142 703 aa24.28■■□□□ 1.48
TNFRSF8-204ENST00000479933 GNAI1P63096 354 aa24.28■■□□□ 1.48
TNFRSF8-204ENST00000479933 HDAC1Q13547 482 aaPredicted RBP24.28■■□□□ 1.48
TNFRSF8-204ENST00000479933 NFKBIBQ15653 356 aa24.28■■□□□ 1.48
TNFRSF8-204ENST00000479933 NRKQ7Z2Y5 1582 aa24.28■■□□□ 1.48
TNFRSF8-204ENST00000479933 IFT57Q9NWB7 429 aa24.28■■□□□ 1.48
TNFRSF8-204ENST00000479933 PRR36Q9H6K5 1346 aa24.27■■□□□ 1.48
TNFRSF8-204ENST00000479933 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.27■■□□□ 1.48
TNFRSF8-204ENST00000479933 HMOX1P09601 288 aa24.27■■□□□ 1.48
TNFRSF8-204ENST00000479933 ITPRIPQ8IWB1 547 aa24.26■■□□□ 1.47
TNFRSF8-204ENST00000479933 PHACTR3Q96KR7 559 aa24.26■■□□□ 1.47
TNFRSF8-204ENST00000479933 ZRANB1Q9UGI0 708 aa24.25■■□□□ 1.47
TNFRSF8-204ENST00000479933 PLEKHG3A1L390 1219 aa24.25■■□□□ 1.47
TNFRSF8-204ENST00000479933 GLIPR1L2Q4G1C9 344 aa24.25■■□□□ 1.47
TNFRSF8-204ENST00000479933 EID1Q9Y6B2 187 aa24.24■■□□□ 1.47
TNFRSF8-204ENST00000479933 NCKAP5LQ9HCH0 1330 aa24.24■■□□□ 1.47
TNFRSF8-204ENST00000479933 CHMP4BQ9H444 224 aaKnown RBP24.23■■□□□ 1.47
TNFRSF8-204ENST00000479933 DLG5Q8TDM6 1919 aa24.23■■□□□ 1.47
TNFRSF8-204ENST00000479933 SLIT1O75093 1534 aa24.23■■□□□ 1.47
TNFRSF8-204ENST00000479933 TTC21BQ7Z4L5 1316 aa24.22■■□□□ 1.47
TNFRSF8-204ENST00000479933 ZNF853P0CG23 659 aa24.22■■□□□ 1.47
TNFRSF8-204ENST00000479933 LTKP29376 864 aa24.22■■□□□ 1.47
TNFRSF8-204ENST00000479933 ARHGAP45Q92619 1136 aa24.22■■□□□ 1.47
TNFRSF8-204ENST00000479933 TMEM57Q8N5G2 664 aa24.21■■□□□ 1.47
TNFRSF8-204ENST00000479933 ZBTB40Q9NUA8 1239 aa24.21■■□□□ 1.47
TNFRSF8-204ENST00000479933 ARHGAP23Q9P227 1491 aa24.21■■□□□ 1.47
TNFRSF8-204ENST00000479933 RRS1Q15050 365 aaKnown RBP24.2■■□□□ 1.47
TNFRSF8-204ENST00000479933 NALCNQ8IZF0 1738 aa24.2■■□□□ 1.46
TNFRSF8-204ENST00000479933 UPF2Q9HAU5 1272 aaKnown RBP24.2■■□□□ 1.46
TNFRSF8-204ENST00000479933 ACEP12821 1306 aa24.19■■□□□ 1.46
TNFRSF8-204ENST00000479933 OVOS2A0A0J9YW53 1432 aa24.19■■□□□ 1.46
TNFRSF8-204ENST00000479933 OVOS2Q6IE36 1432 aa24.19■■□□□ 1.46
TNFRSF8-204ENST00000479933 USP19O94966 1318 aa24.19■■□□□ 1.46
TNFRSF8-204ENST00000479933 USP6P35125 1406 aa24.18■■□□□ 1.46
TNFRSF8-204ENST00000479933 VAMP4O75379 141 aa24.18■■□□□ 1.46
TNFRSF8-204ENST00000479933 CFAP44Q96MT7 982 aa24.18■■□□□ 1.46
TNFRSF8-204ENST00000479933 DIP2AQ14689 1571 aa24.18■■□□□ 1.46
TNFRSF8-204ENST00000479933 PTCH1Q13635 1447 aa24.17■■□□□ 1.46
TNFRSF8-204ENST00000479933 SMC5Q8IY18 1101 aa24.17■■□□□ 1.46
TNFRSF8-204ENST00000479933 TBX22Q9Y458 520 aa24.16■■□□□ 1.46
TNFRSF8-204ENST00000479933 PTPRUQ92729 1446 aa24.16■■□□□ 1.46
TNFRSF8-204ENST00000479933 PIK3R4Q99570 1358 aa24.16■■□□□ 1.46
TNFRSF8-204ENST00000479933 MRPL50Q8N5N7 158 aaKnown RBP24.16■■□□□ 1.46
TNFRSF8-204ENST00000479933 MBIPQ9NS73 344 aa24.15■■□□□ 1.46
TNFRSF8-204ENST00000479933 USP31Q70CQ4 1352 aa24.15■■□□□ 1.46
TNFRSF8-204ENST00000479933 FER1L4A9Z1Z3 1794 aa24.14■■□□□ 1.46
TNFRSF8-204ENST00000479933 THUMPD2Q9BTF0 503 aaKnown RBP24.14■■□□□ 1.45
TNFRSF8-204ENST00000479933 TTC21AQ8NDW8 1320 aa24.13■■□□□ 1.45
TNFRSF8-204ENST00000479933 BECN1Q14457 450 aa24.13■■□□□ 1.45
TNFRSF8-204ENST00000479933 SLC4A3P48751 1232 aa24.13■■□□□ 1.45
TNFRSF8-204ENST00000479933 SSH2Q76I76 1423 aa24.12■■□□□ 1.45
TNFRSF8-204ENST00000479933 SEC24BO95487 1268 aa24.12■■□□□ 1.45
TNFRSF8-204ENST00000479933 EIF4A2Q14240 407 aaKnown RBP24.12■■□□□ 1.45
TNFRSF8-204ENST00000479933 HAP1P54257 671 aaPredicted RBP24.11■■□□□ 1.45
TNFRSF8-204ENST00000479933 AMOTL2Q9Y2J4 779 aa24.11■■□□□ 1.45
TNFRSF8-204ENST00000479933 RIMS1Q86UR5 1692 aaKnown RBP24.11■■□□□ 1.45
TNFRSF8-204ENST00000479933 CEBPAP49715 358 aaPredicted RBP24.11■■□□□ 1.45
TNFRSF8-204ENST00000479933 TWISTNBQ3B726 338 aaPredicted RBP24.11■■□□□ 1.45
TNFRSF8-204ENST00000479933 SLC26A8Q96RN1 970 aa24.11■■□□□ 1.45
TNFRSF8-204ENST00000479933 RGPD1P0DJD0 1748 aa24.1■■□□□ 1.45
TNFRSF8-204ENST00000479933 THEMISQ8N1K5 641 aaPredicted RBP24.1■■□□□ 1.45
TNFRSF8-204ENST00000479933 TSPYL6Q8N831 410 aa24.09■■□□□ 1.45
TNFRSF8-204ENST00000479933 TBC1D32Q96NH3 1257 aa24.08■■□□□ 1.45
TNFRSF8-204ENST00000479933 API5Q9BZZ5 524 aaKnown RBP24.08■■□□□ 1.45
TNFRSF8-204ENST00000479933 PEAK1Q9H792 1746 aa24.08■■□□□ 1.45
TNFRSF8-204ENST00000479933 ABCC4O15439 1325 aa24.08■■□□□ 1.44
TNFRSF8-204ENST00000479933 SULT6B1Q6IMI4 303 aa24.07■■□□□ 1.44
TNFRSF8-204ENST00000479933 FMN2Q9NZ56 1722 aa24.07■■□□□ 1.44
TNFRSF8-204ENST00000479933 ZBTB7BO15156 539 aaPredicted RBP24.07■■□□□ 1.44
TNFRSF8-204ENST00000479933 NUCB1Q02818 461 aa24.07■■□□□ 1.44
TNFRSF8-204ENST00000479933 KIF24Q5T7B8 1368 aa24.06■■□□□ 1.44
TNFRSF8-204ENST00000479933 XRN1Q8IZH2 1706 aaKnown RBP24.05■■□□□ 1.44
TNFRSF8-204ENST00000479933 ARHGEF10O15013 1369 aa24.05■■□□□ 1.44
TNFRSF8-204ENST00000479933 C8orf58Q8NAV2 365 aa24.04■■□□□ 1.44
TNFRSF8-204ENST00000479933 GCC1Q96CN9 775 aa24.04■■□□□ 1.44
TNFRSF8-204ENST00000479933 NUTM2FA1L443 756 aa24.04■■□□□ 1.44
TNFRSF8-204ENST00000479933 ANKARQ7Z5J8 1434 aa24.03■■□□□ 1.44
TNFRSF8-204ENST00000479933 FAM83GA6ND36 823 aa24.02■■□□□ 1.44
TNFRSF8-204ENST00000479933 AEBP1Q8IUX7 1158 aa24.02■■□□□ 1.44
TNFRSF8-204ENST00000479933 KIAA0232Q92628 1395 aa24.02■■□□□ 1.44
TNFRSF8-204ENST00000479933 ELL2O00472 640 aaPredicted RBP24.02■■□□□ 1.44
TNFRSF8-204ENST00000479933 SBNO1A3KN83 1393 aa24.01■■□□□ 1.43
TNFRSF8-204ENST00000479933 FLT4P35916 1363 aa24.01■■□□□ 1.43
TNFRSF8-204ENST00000479933 HSP90AB2PQ58FF8 381 aa24.01■■□□□ 1.43
TNFRSF8-204ENST00000479933 CHD1LQ86WJ1 897 aa24.01■■□□□ 1.43
TNFRSF8-204ENST00000479933 CHL1O00533 1208 aa24■■□□□ 1.43
TNFRSF8-204ENST00000479933 NGDNQ8NEJ9 315 aaKnown RBP24■■□□□ 1.43
TNFRSF8-204ENST00000479933 RGPD8O14715 1765 aaPredicted RBP24■■□□□ 1.43
TNFRSF8-204ENST00000479933 DCTN1Q14203 1278 aa23.99■■□□□ 1.43
TNFRSF8-204ENST00000479933 MAP3K19Q56UN5 1328 aa23.97■■□□□ 1.43
TNFRSF8-204ENST00000479933 PIK3C2AO00443 1686 aa23.96■■□□□ 1.43
TNFRSF8-204ENST00000479933 USP54Q70EL1 1684 aa23.95■■□□□ 1.43
TNFRSF8-204ENST00000479933 KDRP35968 1356 aa23.95■■□□□ 1.42
TNFRSF8-204ENST00000479933 RRP9O43818 475 aaKnown RBP23.94■■□□□ 1.42
TNFRSF8-204ENST00000479933 INTS3Q68E01 1043 aaKnown RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms