RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 PRIM1P49642 420 aaKnown RBP16.03■□□□□ 0.16
LYSMD4-206ENST00000479791 ZCCHC11Q5TAX3 1644 aaKnown RBP16.02■□□□□ 0.15
LYSMD4-206ENST00000479791 PTCH1Q13635 1447 aa16.02■□□□□ 0.15
LYSMD4-206ENST00000479791 XPCQ01831 940 aaPredicted RBP16.01■□□□□ 0.15
LYSMD4-206ENST00000479791 LMTK2Q8IWU2 1503 aa16.01■□□□□ 0.15
LYSMD4-206ENST00000479791 PPLO60437 1756 aa16.01■□□□□ 0.15
LYSMD4-206ENST00000479791 TULP4Q9NRJ4 1543 aa16.01■□□□□ 0.15
LYSMD4-206ENST00000479791 SIRT2Q8IXJ6 389 aa16■□□□□ 0.15
LYSMD4-206ENST00000479791 CCDC39Q9UFE4 941 aa16■□□□□ 0.15
LYSMD4-206ENST00000479791 LRSAM1Q6UWE0 723 aa16■□□□□ 0.15
LYSMD4-206ENST00000479791 AK9Q5TCS8 1911 aa15.99■□□□□ 0.15
LYSMD4-206ENST00000479791 GSPT1P15170 499 aaKnown RBP15.99■□□□□ 0.15
LYSMD4-206ENST00000479791 SMAP1Q8IYB5 467 aaPredicted RBP15.99■□□□□ 0.15
LYSMD4-206ENST00000479791 SASS6Q6UVJ0 657 aa15.99■□□□□ 0.15
LYSMD4-206ENST00000479791 USP26Q9BXU7 913 aa15.99■□□□□ 0.15
LYSMD4-206ENST00000479791 RPGRIP1LQ68CZ1 1315 aa15.98■□□□□ 0.15
LYSMD4-206ENST00000479791 TMEM132EQ6IEE7 984 aa15.98■□□□□ 0.15
LYSMD4-206ENST00000479791 MRPL50Q8N5N7 158 aaKnown RBP15.98■□□□□ 0.15
LYSMD4-206ENST00000479791 GPT2Q8TD30 523 aa15.98■□□□□ 0.15
LYSMD4-206ENST00000479791 UHRF1BP1LA0JNW5 1464 aa15.98■□□□□ 0.15
LYSMD4-206ENST00000479791 PRPF40AO75400 957 aaKnown RBP15.98■□□□□ 0.15
LYSMD4-206ENST00000479791 ABCC4O15439 1325 aa15.98■□□□□ 0.15
LYSMD4-206ENST00000479791 PLEKHM2Q8IWE5 1019 aa15.97■□□□□ 0.15
LYSMD4-206ENST00000479791 C1orf115Q9H7X2 142 aa15.97■□□□□ 0.15
LYSMD4-206ENST00000479791 PNPLA6Q8IY17 1366 aa15.97■□□□□ 0.15
LYSMD4-206ENST00000479791 ST18O60284 1047 aa15.97■□□□□ 0.15
LYSMD4-206ENST00000479791 PKP1Q13835 747 aa15.97■□□□□ 0.15
LYSMD4-206ENST00000479791 DIAPH1O60610 1272 aaKnown RBP15.96■□□□□ 0.15
LYSMD4-206ENST00000479791 VAMP4O75379 141 aa15.96■□□□□ 0.15
LYSMD4-206ENST00000479791 A0A1W2PP64 1363 aa15.96■□□□□ 0.15
LYSMD4-206ENST00000479791 GLI2P10070 1586 aa15.96■□□□□ 0.15
LYSMD4-206ENST00000479791 FCHSD2O94868 740 aa15.96■□□□□ 0.15
LYSMD4-206ENST00000479791 TTC22Q5TAA0 569 aa15.96■□□□□ 0.15
LYSMD4-206ENST00000479791 INTS3Q68E01 1043 aaKnown RBP15.96■□□□□ 0.15
LYSMD4-206ENST00000479791 CHGAP10645 457 aaKnown RBP15.95■□□□□ 0.14
LYSMD4-206ENST00000479791 ARHGEF28Q8N1W1 1705 aaKnown RBP15.95■□□□□ 0.14
LYSMD4-206ENST00000479791 MBD3O95983 291 aa15.94■□□□□ 0.14
LYSMD4-206ENST00000479791 TMEM63CQ9P1W3 806 aa15.94■□□□□ 0.14
LYSMD4-206ENST00000479791 RBM27Q9P2N5 1060 aaKnown RBP15.94■□□□□ 0.14
LYSMD4-206ENST00000479791 ZDHHC9Q9Y397 364 aa15.94■□□□□ 0.14
LYSMD4-206ENST00000479791 ERCC6L2Q5T890 1561 aa15.94■□□□□ 0.14
LYSMD4-206ENST00000479791 ANKRD26Q9UPS8 1709 aa15.94■□□□□ 0.14
LYSMD4-206ENST00000479791 GGNBP2Q9H3C7 697 aa15.94■□□□□ 0.14
LYSMD4-206ENST00000479791 KIF24Q5T7B8 1368 aa15.94■□□□□ 0.14
LYSMD4-206ENST00000479791 CDC42BPGQ6DT37 1551 aa15.94■□□□□ 0.14
LYSMD4-206ENST00000479791 DCTPP1Q9H773 170 aa15.94■□□□□ 0.14
LYSMD4-206ENST00000479791 CABP2Q9NPB3 220 aa15.94■□□□□ 0.14
LYSMD4-206ENST00000479791 SYCE3A1L190 88 aa15.92■□□□□ 0.14
LYSMD4-206ENST00000479791 ZGPATQ8N5A5 531 aaKnown RBP15.92■□□□□ 0.14
LYSMD4-206ENST00000479791 ABCA9Q8IUA7 1624 aa15.92■□□□□ 0.14
LYSMD4-206ENST00000479791 CHD1O14646 1710 aa15.92■□□□□ 0.14
LYSMD4-206ENST00000479791 FYB1O15117 783 aa15.92■□□□□ 0.14
LYSMD4-206ENST00000479791 CASC1Q6TDU7 716 aa15.92■□□□□ 0.14
LYSMD4-206ENST00000479791 API5Q9BZZ5 524 aaKnown RBP15.91■□□□□ 0.14
LYSMD4-206ENST00000479791 FAM135BQ49AJ0 1406 aa15.91■□□□□ 0.14
LYSMD4-206ENST00000479791 YEATS2Q9ULM3 1422 aa15.91■□□□□ 0.14
LYSMD4-206ENST00000479791 LRRC7Q96NW7 1537 aa15.9■□□□□ 0.14
LYSMD4-206ENST00000479791 ZFYVE9O95405 1425 aa15.9■□□□□ 0.14
LYSMD4-206ENST00000479791 KIAA2012Q0VF49 1180 aa15.9■□□□□ 0.14
LYSMD4-206ENST00000479791 IFT57Q9NWB7 429 aa15.9■□□□□ 0.14
LYSMD4-206ENST00000479791 TERF2IPQ9NYB0 399 aa15.9■□□□□ 0.14
LYSMD4-206ENST00000479791 REC8O95072 547 aa15.89■□□□□ 0.13
LYSMD4-206ENST00000479791 GNAI1P63096 354 aa15.89■□□□□ 0.13
LYSMD4-206ENST00000479791 CCDC94Q9BW85 323 aaPredicted RBP15.89■□□□□ 0.13
LYSMD4-206ENST00000479791 NPATQ14207 1427 aa15.89■□□□□ 0.13
LYSMD4-206ENST00000479791 TSPYL6Q8N831 410 aa15.89■□□□□ 0.13
LYSMD4-206ENST00000479791 MYRIPQ8NFW9 859 aa15.89■□□□□ 0.13
LYSMD4-206ENST00000479791 ATAD2Q6PL18 1390 aa15.88■□□□□ 0.13
LYSMD4-206ENST00000479791 NFE2L2Q16236 605 aa15.88■□□□□ 0.13
LYSMD4-206ENST00000479791 NSFL1CQ9UNZ2 370 aaKnown RBP15.88■□□□□ 0.13
LYSMD4-206ENST00000479791 ZNF853P0CG23 659 aa15.88■□□□□ 0.13
LYSMD4-206ENST00000479791 PRKAR2BP31323 418 aa15.88■□□□□ 0.13
LYSMD4-206ENST00000479791 UTP14CQ5TAP6 766 aaKnown RBP15.88■□□□□ 0.13
LYSMD4-206ENST00000479791 PRIMPOLQ96LW4 560 aa15.87■□□□□ 0.13
LYSMD4-206ENST00000479791 VGFO15240 615 aaPredicted RBP15.87■□□□□ 0.13
LYSMD4-206ENST00000479791 SDSP20132 328 aa15.87■□□□□ 0.13
LYSMD4-206ENST00000479791 SYAP1Q96A49 352 aaPredicted RBP15.87■□□□□ 0.13
LYSMD4-206ENST00000479791 TSPY26PQ9H489 355 aa15.87■□□□□ 0.13
LYSMD4-206ENST00000479791 KNDC1Q76NI1 1749 aa15.87■□□□□ 0.13
LYSMD4-206ENST00000479791 ASXL2Q76L83 1435 aa15.86■□□□□ 0.13
LYSMD4-206ENST00000479791 PTMAP06454 111 aaKnown RBP15.86■□□□□ 0.13
LYSMD4-206ENST00000479791 SRPK2P78362 688 aaKnown RBP15.86■□□□□ 0.13
LYSMD4-206ENST00000479791 MCM2P49736 904 aa15.86■□□□□ 0.13
LYSMD4-206ENST00000479791 HMGN5P82970 282 aaKnown RBP15.86■□□□□ 0.13
LYSMD4-206ENST00000479791 TWISTNBQ3B726 338 aaPredicted RBP15.86■□□□□ 0.13
LYSMD4-206ENST00000479791 C16orf71Q8IYS4 520 aaPredicted RBP15.86■□□□□ 0.13
LYSMD4-206ENST00000479791 ANKRD44Q8N8A2 993 aa15.86■□□□□ 0.13
LYSMD4-206ENST00000479791 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.86■□□□□ 0.13
LYSMD4-206ENST00000479791 CD163L1Q9NR16 1453 aa15.86■□□□□ 0.13
LYSMD4-206ENST00000479791 CAMSAP1Q5T5Y3 1602 aa15.85■□□□□ 0.13
LYSMD4-206ENST00000479791 BRD1O95696 1058 aa15.85■□□□□ 0.13
LYSMD4-206ENST00000479791 GTF2F1P35269 517 aaKnown RBP eCLIP15.85■□□□□ 0.13
LYSMD4-206ENST00000479791 RPAP2Q8IXW5 612 aaPredicted RBP15.85■□□□□ 0.13
LYSMD4-206ENST00000479791 RNF214Q8ND24 703 aa15.85■□□□□ 0.13
LYSMD4-206ENST00000479791 MBIPQ9NS73 344 aa15.85■□□□□ 0.13
LYSMD4-206ENST00000479791 ERC2O15083 957 aa15.84■□□□□ 0.13
LYSMD4-206ENST00000479791 KIDINS220Q9ULH0 1771 aa15.84■□□□□ 0.13
LYSMD4-206ENST00000479791 PHF14O94880 888 aa15.84■□□□□ 0.13
LYSMD4-206ENST00000479791 FAM184AQ8NB25 1140 aa15.84■□□□□ 0.13
LYSMD4-206ENST00000479791 DMTNQ08495 405 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms