RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 DIP2CQ9Y2E4 1556 aa9.26□□□□□ -0.93
SF3B1-209ENST00000479532 AXIN1O15169 862 aa9.26□□□□□ -0.93
SF3B1-209ENST00000479532 ITGAEP38570 1179 aa9.26□□□□□ -0.93
SF3B1-209ENST00000479532 ABCA6Q8N139 1617 aa9.26□□□□□ -0.93
SF3B1-209ENST00000479532 ATP10AO60312 1499 aa9.26□□□□□ -0.93
SF3B1-209ENST00000479532 YEATS2Q9ULM3 1422 aa9.25□□□□□ -0.93
SF3B1-209ENST00000479532 FAM181BA6NEQ2 426 aa9.25□□□□□ -0.93
SF3B1-209ENST00000479532 TMEM132AQ24JP5 1023 aa9.25□□□□□ -0.93
SF3B1-209ENST00000479532 BARGINQ6ZT62 677 aa9.25□□□□□ -0.93
SF3B1-209ENST00000479532 REREQ9P2R6 1566 aa9.24□□□□□ -0.93
SF3B1-209ENST00000479532 A2MP01023 1474 aa9.24□□□□□ -0.93
SF3B1-209ENST00000479532 ARID4BQ4LE39 1312 aaPredicted RBP9.24□□□□□ -0.93
SF3B1-209ENST00000479532 ADGRL2O95490 1459 aa9.23□□□□□ -0.93
SF3B1-209ENST00000479532 DUOX2Q9NRD8 1548 aa9.23□□□□□ -0.93
SF3B1-209ENST00000479532 TLL1O43897 1013 aa9.23□□□□□ -0.93
SF3B1-209ENST00000479532 CRIPAKQ8N1N5 446 aa9.23□□□□□ -0.93
SF3B1-209ENST00000479532 CHIC2Q9UKJ5 165 aa9.23□□□□□ -0.93
SF3B1-209ENST00000479532 ROCK1Q13464 1354 aa9.23□□□□□ -0.93
SF3B1-209ENST00000479532 NEUROD2Q15784 382 aa9.22□□□□□ -0.93
SF3B1-209ENST00000479532 EIF2AK4Q9P2K8 1649 aaKnown RBP9.22□□□□□ -0.93
SF3B1-209ENST00000479532 KIF15Q9NS87 1388 aa9.22□□□□□ -0.93
SF3B1-209ENST00000479532 GRXCR2A6NFK2 248 aa9.21□□□□□ -0.94
SF3B1-209ENST00000479532 RRP7BPQ9NSQ0 103 aa9.21□□□□□ -0.94
SF3B1-209ENST00000479532 DHX29Q7Z478 1369 aaKnown RBP9.21□□□□□ -0.94
SF3B1-209ENST00000479532 NCOA1Q15788 1441 aa9.21□□□□□ -0.94
SF3B1-209ENST00000479532 ERBINQ96RT1 1412 aa9.21□□□□□ -0.94
SF3B1-209ENST00000479532 AGLP35573 1532 aa9.21□□□□□ -0.94
SF3B1-209ENST00000479532 RBM27Q9P2N5 1060 aaKnown RBP9.2□□□□□ -0.94
SF3B1-209ENST00000479532 GCC2Q8IWJ2 1684 aa9.2□□□□□ -0.94
SF3B1-209ENST00000479532 CTC1Q2NKJ3 1217 aa9.19□□□□□ -0.94
SF3B1-209ENST00000479532 ESF1Q9H501 851 aaKnown RBP9.19□□□□□ -0.94
SF3B1-209ENST00000479532 PTPRKQ15262 1439 aa9.19□□□□□ -0.94
SF3B1-209ENST00000479532 BCORL1Q5H9F3 1711 aa9.19□□□□□ -0.94
SF3B1-209ENST00000479532 TRIM26Q12899 539 aaPredicted RBP9.18□□□□□ -0.94
SF3B1-209ENST00000479532 CYP4X1Q8N118 509 aa9.18□□□□□ -0.94
SF3B1-209ENST00000479532 KRI1Q8N9T8 703 aaKnown RBP9.18□□□□□ -0.94
SF3B1-209ENST00000479532 PKD2L1Q9P0L9 805 aa9.18□□□□□ -0.94
SF3B1-209ENST00000479532 GTF3C3Q9Y5Q9 886 aa9.18□□□□□ -0.94
SF3B1-209ENST00000479532 ANKRD50Q9ULJ7 1429 aa9.17□□□□□ -0.94
SF3B1-209ENST00000479532 ACIN1Q9UKV3 1341 aaKnown RBP9.17□□□□□ -0.94
SF3B1-209ENST00000479532 TERTO14746 1132 aaKnown RBP9.17□□□□□ -0.94
SF3B1-209ENST00000479532 KIF3BO15066 747 aa9.17□□□□□ -0.94
SF3B1-209ENST00000479532 AVPP01185 164 aa9.17□□□□□ -0.94
SF3B1-209ENST00000479532 HRCP23327 699 aa9.17□□□□□ -0.94
SF3B1-209ENST00000479532 FER1L4A9Z1Z3 1794 aa9.17□□□□□ -0.94
SF3B1-209ENST00000479532 HFM1A2PYH4 1435 aa9.16□□□□□ -0.94
SF3B1-209ENST00000479532 KANK1Q14678 1352 aa9.16□□□□□ -0.94
SF3B1-209ENST00000479532 GPR37O15354 613 aa9.16□□□□□ -0.94
SF3B1-209ENST00000479532 MLECQ14165 292 aa9.16□□□□□ -0.94
SF3B1-209ENST00000479532 AK7Q96M32 723 aa9.16□□□□□ -0.94
SF3B1-209ENST00000479532 SLC6A16Q9GZN6 736 aa9.16□□□□□ -0.94
SF3B1-209ENST00000479532 SIGLEC1Q9BZZ2 1709 aa9.16□□□□□ -0.94
SF3B1-209ENST00000479532 RNF17Q9BXT8 1623 aaKnown RBP9.16□□□□□ -0.94
SF3B1-209ENST00000479532 FAM135AQ9P2D6 1515 aa9.15□□□□□ -0.94
SF3B1-209ENST00000479532 ADH1BP00325 375 aa9.15□□□□□ -0.94
SF3B1-209ENST00000479532 PRIM1P49642 420 aaKnown RBP9.15□□□□□ -0.94
SF3B1-209ENST00000479532 KMT5BQ4FZB7 885 aa9.15□□□□□ -0.94
SF3B1-209ENST00000479532 GGT6Q6P531 493 aa9.15□□□□□ -0.94
SF3B1-209ENST00000479532 CDHR5Q9HBB8 845 aa9.15□□□□□ -0.94
SF3B1-209ENST00000479532 ZC3H13Q5T200 1668 aaKnown RBP9.15□□□□□ -0.94
SF3B1-209ENST00000479532 DEPDC5O75140 1603 aa9.14□□□□□ -0.95
SF3B1-209ENST00000479532 NUTM2FA1L443 756 aa9.14□□□□□ -0.95
SF3B1-209ENST00000479532 PLA2G2CQ5R387 149 aa9.14□□□□□ -0.95
SF3B1-209ENST00000479532 NAIPQ13075 1403 aa9.14□□□□□ -0.95
SF3B1-209ENST00000479532 CNTLNQ9NXG0 1405 aa9.14□□□□□ -0.95
SF3B1-209ENST00000479532 ADAMTSL3P82987 1691 aa9.13□□□□□ -0.95
SF3B1-209ENST00000479532 CD2BP2O95400 341 aaKnown RBP9.13□□□□□ -0.95
SF3B1-209ENST00000479532 OSBPP22059 807 aa9.13□□□□□ -0.95
SF3B1-209ENST00000479532 PADI6Q6TGC4 694 aa9.13□□□□□ -0.95
SF3B1-209ENST00000479532 PRDM15P57071 1507 aaPredicted RBP9.13□□□□□ -0.95
SF3B1-209ENST00000479532 KDM5DQ9BY66 1539 aa9.13□□□□□ -0.95
SF3B1-209ENST00000479532 RIMS1Q86UR5 1692 aaKnown RBP9.13□□□□□ -0.95
SF3B1-209ENST00000479532 SETD5Q9C0A6 1442 aa9.13□□□□□ -0.95
SF3B1-209ENST00000479532 MADDQ8WXG6 1647 aa9.13□□□□□ -0.95
SF3B1-209ENST00000479532 UNC13BO14795 1591 aa9.12□□□□□ -0.95
SF3B1-209ENST00000479532 NR1I2O75469 434 aa9.12□□□□□ -0.95
SF3B1-209ENST00000479532 TOR4AQ9NXH8 423 aa9.12□□□□□ -0.95
SF3B1-209ENST00000479532 MROH2AA6NES4 1674 aa9.12□□□□□ -0.95
SF3B1-209ENST00000479532 CLTCQ00610 1675 aaKnown RBP9.12□□□□□ -0.95
SF3B1-209ENST00000479532 WASHC2CQ9Y4E1 1318 aa9.11□□□□□ -0.95
SF3B1-209ENST00000479532 ACTN4O43707 911 aaKnown RBP9.11□□□□□ -0.95
SF3B1-209ENST00000479532 SMCPP49901 116 aaPredicted RBP9.11□□□□□ -0.95
SF3B1-209ENST00000479532 TTC13Q8NBP0 860 aa9.11□□□□□ -0.95
SF3B1-209ENST00000479532 EYA1Q99502 592 aa9.11□□□□□ -0.95
SF3B1-209ENST00000479532 CEP152O94986 1710 aa9.11□□□□□ -0.95
SF3B1-209ENST00000479532 MROH1Q8NDA8 1641 aa9.1□□□□□ -0.95
SF3B1-209ENST00000479532 TTC24A2A3L6 582 aaPredicted RBP9.1□□□□□ -0.95
SF3B1-209ENST00000479532 SNRPBP14678 240 aaKnown RBP9.1□□□□□ -0.95
SF3B1-209ENST00000479532 SUZ12Q15022 739 aaKnown RBP9.1□□□□□ -0.95
SF3B1-209ENST00000479532 TRIM52Q96A61 297 aa9.1□□□□□ -0.95
SF3B1-209ENST00000479532 TIMELESSQ9UNS1 1208 aa9.1□□□□□ -0.95
SF3B1-209ENST00000479532 CAMSAP1Q5T5Y3 1602 aa9.09□□□□□ -0.95
SF3B1-209ENST00000479532 IQGAP3Q86VI3 1631 aa9.09□□□□□ -0.95
SF3B1-209ENST00000479532 TRIM66O15016 1216 aa9.09□□□□□ -0.95
SF3B1-209ENST00000479532 SLC16A10Q8TF71 515 aa9.09□□□□□ -0.95
SF3B1-209ENST00000479532 GPBP1L1Q9HC44 474 aaPredicted RBP9.09□□□□□ -0.95
SF3B1-209ENST00000479532 SENP2Q9HC62 589 aa9.09□□□□□ -0.95
SF3B1-209ENST00000479532 ABCC3O15438 1527 aa9.09□□□□□ -0.95
SF3B1-209ENST00000479532 NUP155O75694 1391 aa9.09□□□□□ -0.95
SF3B1-209ENST00000479532 RPIAP49247 311 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms