RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 CT47B1P0C2W7 299 aaPredicted RBP16.67■□□□□ 0.26
PDZRN3-208ENST00000479530 MED14O60244 1454 aa16.67■□□□□ 0.26
PDZRN3-208ENST00000479530 FAM83GA6ND36 823 aa16.66■□□□□ 0.26
PDZRN3-208ENST00000479530 ZBTB40Q9NUA8 1239 aa16.66■□□□□ 0.26
PDZRN3-208ENST00000479530 IL16Q14005 1332 aa16.66■□□□□ 0.26
PDZRN3-208ENST00000479530 ESPNB1AK53 854 aa16.66■□□□□ 0.26
PDZRN3-208ENST00000479530 IL13P35225 146 aa16.66■□□□□ 0.26
PDZRN3-208ENST00000479530 RBM25P49756 843 aaKnown RBP16.66■□□□□ 0.26
PDZRN3-208ENST00000479530 NUDT16Q96DE0 195 aaKnown RBP16.66■□□□□ 0.26
PDZRN3-208ENST00000479530 DCTN1Q14203 1278 aa16.66■□□□□ 0.26
PDZRN3-208ENST00000479530 C1orf115Q9H7X2 142 aa16.65■□□□□ 0.26
PDZRN3-208ENST00000479530 KIF2CQ99661 725 aa16.65■□□□□ 0.26
PDZRN3-208ENST00000479530 LRRC7Q96NW7 1537 aa16.64■□□□□ 0.26
PDZRN3-208ENST00000479530 PLEKHG5O94827 1062 aa16.64■□□□□ 0.25
PDZRN3-208ENST00000479530 CLTCQ00610 1675 aaKnown RBP16.64■□□□□ 0.25
PDZRN3-208ENST00000479530 NUCB1Q02818 461 aa16.64■□□□□ 0.25
PDZRN3-208ENST00000479530 NFE2L2Q16236 605 aa16.64■□□□□ 0.25
PDZRN3-208ENST00000479530 PPIP5K1Q6PFW1 1433 aa16.63■□□□□ 0.25
PDZRN3-208ENST00000479530 VAMP4O75379 141 aa16.63■□□□□ 0.25
PDZRN3-208ENST00000479530 RBM42Q9BTD8 480 aaKnown RBP16.63■□□□□ 0.25
PDZRN3-208ENST00000479530 FAM135BQ49AJ0 1406 aa16.63■□□□□ 0.25
PDZRN3-208ENST00000479530 HSP90AB1P08238 724 aaKnown RBP16.63■□□□□ 0.25
PDZRN3-208ENST00000479530 SNX21Q969T3 373 aa16.63■□□□□ 0.25
PDZRN3-208ENST00000479530 HSP90AA1P07900 732 aaKnown RBP16.62■□□□□ 0.25
PDZRN3-208ENST00000479530 PRR36Q9H6K5 1346 aa16.62■□□□□ 0.25
PDZRN3-208ENST00000479530 RAB3GAP1Q15042 981 aa16.61■□□□□ 0.25
PDZRN3-208ENST00000479530 MBIPQ9NS73 344 aa16.61■□□□□ 0.25
PDZRN3-208ENST00000479530 DIP2BQ9P265 1576 aa16.61■□□□□ 0.25
PDZRN3-208ENST00000479530 HSP90AA2PQ14568 343 aaPredicted RBP16.61■□□□□ 0.25
PDZRN3-208ENST00000479530 CHD1LQ86WJ1 897 aa16.61■□□□□ 0.25
PDZRN3-208ENST00000479530 C8orf58Q8NAV2 365 aa16.61■□□□□ 0.25
PDZRN3-208ENST00000479530 CPSF1Q10570 1443 aaKnown RBP16.61■□□□□ 0.25
PDZRN3-208ENST00000479530 CPS1P31327 1500 aa16.61■□□□□ 0.25
PDZRN3-208ENST00000479530 AEBP1Q8IUX7 1158 aa16.6■□□□□ 0.25
PDZRN3-208ENST00000479530 MRPL50Q8N5N7 158 aaKnown RBP16.6■□□□□ 0.25
PDZRN3-208ENST00000479530 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
PDZRN3-208ENST00000479530 SOX12O15370 315 aa16.59■□□□□ 0.25
PDZRN3-208ENST00000479530 IPO8O15397 1037 aaKnown RBP16.59■□□□□ 0.25
PDZRN3-208ENST00000479530 KRT24Q2M2I5 525 aa16.59■□□□□ 0.25
PDZRN3-208ENST00000479530 PPP6R1Q9UPN7 881 aa16.59■□□□□ 0.25
PDZRN3-208ENST00000479530 ANKRD26Q9UPS8 1709 aa16.59■□□□□ 0.25
PDZRN3-208ENST00000479530 KIF16BQ96L93 1317 aa16.58■□□□□ 0.25
PDZRN3-208ENST00000479530 TRIM44Q96DX7 344 aaPredicted RBP16.58■□□□□ 0.25
PDZRN3-208ENST00000479530 COG3Q96JB2 828 aa16.58■□□□□ 0.25
PDZRN3-208ENST00000479530 PODXL2Q9NZ53 605 aa16.58■□□□□ 0.25
PDZRN3-208ENST00000479530 ATP7BP35670 1465 aa16.58■□□□□ 0.24
PDZRN3-208ENST00000479530 ZBTB7BO15156 539 aaPredicted RBP16.58■□□□□ 0.24
PDZRN3-208ENST00000479530 ALDH1L2Q3SY69 923 aa16.58■□□□□ 0.24
PDZRN3-208ENST00000479530 SPATA31D1Q6ZQQ2 1576 aa16.57■□□□□ 0.24
PDZRN3-208ENST00000479530 SSFA2P28290 1259 aa16.57■□□□□ 0.24
PDZRN3-208ENST00000479530 ANKRD45Q5TZF3 282 aa16.57■□□□□ 0.24
PDZRN3-208ENST00000479530 PLPPR3Q6T4P5 718 aa16.57■□□□□ 0.24
PDZRN3-208ENST00000479530 VSIG10Q8N0Z9 540 aa16.57■□□□□ 0.24
PDZRN3-208ENST00000479530 GBP4Q96PP9 640 aa16.57■□□□□ 0.24
PDZRN3-208ENST00000479530 RIMBP3CA6NJZ7 1639 aa16.57■□□□□ 0.24
PDZRN3-208ENST00000479530 RIMBP3BA6NNM3 1639 aa16.57■□□□□ 0.24
PDZRN3-208ENST00000479530 RIMBP3Q9UFD9 1639 aa16.57■□□□□ 0.24
PDZRN3-208ENST00000479530 ZNF853P0CG23 659 aa16.57■□□□□ 0.24
PDZRN3-208ENST00000479530 ESF1Q9H501 851 aaKnown RBP16.57■□□□□ 0.24
PDZRN3-208ENST00000479530 ISY1Q9ULR0 285 aaKnown RBP16.57■□□□□ 0.24
PDZRN3-208ENST00000479530 SIRT2Q8IXJ6 389 aa16.56■□□□□ 0.24
PDZRN3-208ENST00000479530 GAS2L2Q8NHY3 880 aa16.56■□□□□ 0.24
PDZRN3-208ENST00000479530 EDC4Q6P2E9 1401 aaKnown RBP16.56■□□□□ 0.24
PDZRN3-208ENST00000479530 BMP2KLQ5H9B9 411 aa16.56■□□□□ 0.24
PDZRN3-208ENST00000479530 TBC1D9Q6ZT07 1266 aa16.56■□□□□ 0.24
PDZRN3-208ENST00000479530 CIZ1Q9ULV3 898 aaPredicted RBP16.56■□□□□ 0.24
PDZRN3-208ENST00000479530 MAP2P11137 1827 aaKnown RBP16.56■□□□□ 0.24
PDZRN3-208ENST00000479530 AGLP35573 1532 aa16.56■□□□□ 0.24
PDZRN3-208ENST00000479530 DLC1Q96QB1 1528 aa16.56■□□□□ 0.24
PDZRN3-208ENST00000479530 ROBO2Q9HCK4 1378 aa16.56■□□□□ 0.24
PDZRN3-208ENST00000479530 NRXN3Q9Y4C0 1643 aa16.55■□□□□ 0.24
PDZRN3-208ENST00000479530 KIF20BQ96Q89 1820 aa16.55■□□□□ 0.24
PDZRN3-208ENST00000479530 SETD1AO15047 1707 aaKnown RBP16.55■□□□□ 0.24
PDZRN3-208ENST00000479530 RRP9O43818 475 aaKnown RBP16.55■□□□□ 0.24
PDZRN3-208ENST00000479530 CEBPAP49715 358 aaPredicted RBP16.55■□□□□ 0.24
PDZRN3-208ENST00000479530 LTKP29376 864 aa16.55■□□□□ 0.24
PDZRN3-208ENST00000479530 TWISTNBQ3B726 338 aaPredicted RBP16.55■□□□□ 0.24
PDZRN3-208ENST00000479530 K7ELQ4 463 aaPredicted RBP16.54■□□□□ 0.24
PDZRN3-208ENST00000479530 IFT57Q9NWB7 429 aa16.54■□□□□ 0.24
PDZRN3-208ENST00000479530 GNAI1P63096 354 aa16.54■□□□□ 0.24
PDZRN3-208ENST00000479530 SLC26A8Q96RN1 970 aa16.54■□□□□ 0.24
PDZRN3-208ENST00000479530 AK9Q5TCS8 1911 aa16.53■□□□□ 0.24
PDZRN3-208ENST00000479530 SULT6B1Q6IMI4 303 aa16.53■□□□□ 0.24
PDZRN3-208ENST00000479530 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.53■□□□□ 0.24
PDZRN3-208ENST00000479530 ZMYND15Q9H091 742 aa16.53■□□□□ 0.24
PDZRN3-208ENST00000479530 CDC42BPGQ6DT37 1551 aa16.53■□□□□ 0.24
PDZRN3-208ENST00000479530 EIF4A2Q14240 407 aaKnown RBP16.53■□□□□ 0.24
PDZRN3-208ENST00000479530 GLIPR1L2Q4G1C9 344 aa16.52■□□□□ 0.24
PDZRN3-208ENST00000479530 HSP90AB2PQ58FF8 381 aa16.52■□□□□ 0.24
PDZRN3-208ENST00000479530 MCM10Q7L590 875 aa16.52■□□□□ 0.24
PDZRN3-208ENST00000479530 SKOR2Q2VWA4 1001 aaPredicted RBP16.52■□□□□ 0.23
PDZRN3-208ENST00000479530 CFAP44Q96MT7 982 aa16.52■□□□□ 0.23
PDZRN3-208ENST00000479530 BRPF1P55201 1214 aaPredicted RBP16.51■□□□□ 0.23
PDZRN3-208ENST00000479530 ACEP12821 1306 aa16.51■□□□□ 0.23
PDZRN3-208ENST00000479530 MIS18AQ9NYP9 233 aa16.5■□□□□ 0.23
PDZRN3-208ENST00000479530 AATKQ6ZMQ8 1374 aa16.5■□□□□ 0.23
PDZRN3-208ENST00000479530 NASPP49321 788 aaPredicted RBP16.5■□□□□ 0.23
PDZRN3-208ENST00000479530 TTC21BQ7Z4L5 1316 aa16.5■□□□□ 0.23
PDZRN3-208ENST00000479530 BAG4O95429 457 aaKnown RBP16.49■□□□□ 0.23
PDZRN3-208ENST00000479530 REREQ9P2R6 1566 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms