RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 HECW1Q76N89 1606 aa23.33■■□□□ 1.33
ABCA2-217ENST00000479446 EPS15P42566 896 aa23.33■■□□□ 1.32
ABCA2-217ENST00000479446 PATL2C9JE40 543 aaKnown RBP23.33■■□□□ 1.32
ABCA2-217ENST00000479446 TNMDQ9H2S6 317 aa23.33■■□□□ 1.32
ABCA2-217ENST00000479446 SPC24Q8NBT2 197 aa23.32■■□□□ 1.32
ABCA2-217ENST00000479446 TOP2BQ02880 1626 aa23.32■■□□□ 1.32
ABCA2-217ENST00000479446 KIF6Q6ZMV9 814 aa23.32■■□□□ 1.32
ABCA2-217ENST00000479446 PIP4K2AP48426 406 aaPredicted RBP23.32■■□□□ 1.32
ABCA2-217ENST00000479446 CT47A1Q5JQC4 288 aaPredicted RBP23.32■■□□□ 1.32
ABCA2-217ENST00000479446 TXLNAP40222 546 aa23.31■■□□□ 1.32
ABCA2-217ENST00000479446 LARP1BQ659C4 914 aaKnown RBP23.31■■□□□ 1.32
ABCA2-217ENST00000479446 TATP17735 454 aaPredicted RBP23.31■■□□□ 1.32
ABCA2-217ENST00000479446 TTC39AQ5SRH9 613 aa23.3■■□□□ 1.32
ABCA2-217ENST00000479446 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.3■■□□□ 1.324e-7■■■■■ 38.4
ABCA2-217ENST00000479446 RTEL1-TNFRSF6BF6WH68 1400 aa23.3■■□□□ 1.32
ABCA2-217ENST00000479446 TTLL5Q6EMB2 1281 aa23.3■■□□□ 1.32
ABCA2-217ENST00000479446 ZNF530Q6P9A1 599 aaPredicted RBP23.3■■□□□ 1.32
ABCA2-217ENST00000479446 STK3Q13188 491 aa23.29■■□□□ 1.32
ABCA2-217ENST00000479446 ZSCAN31Q96LW9 406 aaPredicted RBP23.29■■□□□ 1.32
ABCA2-217ENST00000479446 TMPOP42166 694 aaKnown RBP23.29■■□□□ 1.32
ABCA2-217ENST00000479446 BLOC1S2Q6QNY1 142 aa23.29■■□□□ 1.32
ABCA2-217ENST00000479446 SLC3A2P08195 630 aaKnown RBP23.29■■□□□ 1.32
ABCA2-217ENST00000479446 ME1P48163 572 aa23.28■■□□□ 1.32
ABCA2-217ENST00000479446 RRP12Q5JTH9 1297 aaKnown RBP23.28■■□□□ 1.32
ABCA2-217ENST00000479446 MTMR7Q9Y216 660 aa23.28■■□□□ 1.32
ABCA2-217ENST00000479446 NFE2L2Q16236 605 aa23.28■■□□□ 1.32
ABCA2-217ENST00000479446 TMEM57Q8N5G2 664 aa23.28■■□□□ 1.32
ABCA2-217ENST00000479446 SRGAP3O43295 1099 aa23.28■■□□□ 1.32
ABCA2-217ENST00000479446 SIL1Q9H173 461 aa23.28■■□□□ 1.32
ABCA2-217ENST00000479446 SUPT6HQ7KZ85 1726 aaKnown RBP23.28■■□□□ 1.32
ABCA2-217ENST00000479446 CNNM1Q9NRU3 951 aa23.27■■□□□ 1.32
ABCA2-217ENST00000479446 MAGEC2Q9UBF1 373 aaPredicted RBP23.27■■□□□ 1.32
ABCA2-217ENST00000479446 CWC15Q9P013 229 aaKnown RBP23.26■■□□□ 1.31
ABCA2-217ENST00000479446 MAP4K4O95819 1239 aaPredicted RBP23.26■■□□□ 1.31
ABCA2-217ENST00000479446 SERPINC1P01008 464 aa23.26■■□□□ 1.31
ABCA2-217ENST00000479446 NSD3Q9BZ95 1437 aa23.26■■□□□ 1.31
ABCA2-217ENST00000479446 TRIM22Q8IYM9 498 aa23.26■■□□□ 1.31
ABCA2-217ENST00000479446 PDRG1Q9NUG6 133 aa23.25■■□□□ 1.31
ABCA2-217ENST00000479446 ESPNB1AK53 854 aa23.25■■□□□ 1.31
ABCA2-217ENST00000479446 PDIA4P13667 645 aaKnown RBP23.25■■□□□ 1.31
ABCA2-217ENST00000479446 AACSQ86V21 672 aa23.25■■□□□ 1.31
ABCA2-217ENST00000479446 RBM42Q9BTD8 480 aaKnown RBP23.24■■□□□ 1.31
ABCA2-217ENST00000479446 CCDC66A2RUB6 948 aa23.24■■□□□ 1.31
ABCA2-217ENST00000479446 FAM177BA6PVY3 158 aa23.24■■□□□ 1.31
ABCA2-217ENST00000479446 BRPF1P55201 1214 aaPredicted RBP23.24■■□□□ 1.31
ABCA2-217ENST00000479446 ODF2Q5BJF6 829 aa23.24■■□□□ 1.31
ABCA2-217ENST00000479446 CCDC112Q8NEF3 446 aa23.24■■□□□ 1.31
ABCA2-217ENST00000479446 PPP6R1Q9UPN7 881 aa23.24■■□□□ 1.31
ABCA2-217ENST00000479446 RBM10P98175 930 aaKnown RBP23.23■■□□□ 1.31
ABCA2-217ENST00000479446 NACAP1Q9BZK3 213 aa23.23■■□□□ 1.31
ABCA2-217ENST00000479446 DACH1Q9UI36 760 aa23.23■■□□□ 1.31
ABCA2-217ENST00000479446 SAMD1Q6SPF0 538 aaPredicted RBP23.23■■□□□ 1.31
ABCA2-217ENST00000479446 CDK5RAP3Q96JB5 506 aa23.23■■□□□ 1.31
ABCA2-217ENST00000479446 JAKMIP1Q96N16 626 aaKnown RBP23.23■■□□□ 1.31
ABCA2-217ENST00000479446 SPATA32Q96LK8 384 aa23.23■■□□□ 1.31
ABCA2-217ENST00000479446 GNL3LQ9NVN8 582 aaKnown RBP23.23■■□□□ 1.31
ABCA2-217ENST00000479446 KRT32Q14532 448 aa23.22■■□□□ 1.31
ABCA2-217ENST00000479446 IL1RAPL2Q9NP60 686 aa23.22■■□□□ 1.31
ABCA2-217ENST00000479446 CFAP45Q9UL16 551 aa23.22■■□□□ 1.31
ABCA2-217ENST00000479446 RRS1Q15050 365 aaKnown RBP23.22■■□□□ 1.31
ABCA2-217ENST00000479446 CWC27Q6UX04 472 aaKnown RBP23.21■■□□□ 1.31
ABCA2-217ENST00000479446 CABP4P57796 275 aa23.21■■□□□ 1.31
ABCA2-217ENST00000479446 TOPBP1Q92547 1522 aa23.21■■□□□ 1.31
ABCA2-217ENST00000479446 IFT140Q96RY7 1462 aa23.21■■□□□ 1.31
ABCA2-217ENST00000479446 PROSER2Q86WR7 435 aaPredicted RBP23.21■■□□□ 1.31
ABCA2-217ENST00000479446 ZNHIT6Q9NWK9 470 aaKnown RBP23.21■■□□□ 1.31
ABCA2-217ENST00000479446 RARSP54136 660 aaKnown RBP23.2■■□□□ 1.31
ABCA2-217ENST00000479446 NUP62CLQ9H1M0 184 aa23.2■■□□□ 1.31
ABCA2-217ENST00000479446 POLA1P09884 1462 aaPredicted RBP23.2■■□□□ 1.31
ABCA2-217ENST00000479446 ZSCAN25Q6NSZ9 544 aa23.2■■□□□ 1.3
ABCA2-217ENST00000479446 THEMISQ8N1K5 641 aaPredicted RBP23.2■■□□□ 1.3
ABCA2-217ENST00000479446 MPNDQ8N594 471 aa23.2■■□□□ 1.3
ABCA2-217ENST00000479446 MYO6Q9UM54 1294 aa23.2■■□□□ 1.3
ABCA2-217ENST00000479446 PPFIBP1Q86W92 1011 aa23.2■■□□□ 1.3
ABCA2-217ENST00000479446 IKQ13123 557 aaPredicted RBP23.19■■□□□ 1.3
ABCA2-217ENST00000479446 SPG7Q9UQ90 795 aa23.19■■□□□ 1.3
ABCA2-217ENST00000479446 CEP57L1Q8IYX8 460 aa23.19■■□□□ 1.3
ABCA2-217ENST00000479446 CTNNA3Q9UI47 895 aa23.19■■□□□ 1.3
ABCA2-217ENST00000479446 CCAR1Q8IX12 1150 aaKnown RBP23.19■■□□□ 1.3
ABCA2-217ENST00000479446 DCTN1Q14203 1278 aa23.18■■□□□ 1.3
ABCA2-217ENST00000479446 ALDH1L2Q3SY69 923 aa23.18■■□□□ 1.3
ABCA2-217ENST00000479446 C11orf95C9JLR9 678 aaPredicted RBP23.18■■□□□ 1.3
ABCA2-217ENST00000479446 CBFA2T2O43439 604 aa23.18■■□□□ 1.3
ABCA2-217ENST00000479446 CDKL5O76039 1030 aa23.18■■□□□ 1.3
ABCA2-217ENST00000479446 CCDC57Q2TAC2 916 aa23.18■■□□□ 1.3
ABCA2-217ENST00000479446 HSP90AB2PQ58FF8 381 aa23.18■■□□□ 1.3
ABCA2-217ENST00000479446 EPRSP07814 1512 aaKnown RBP23.17■■□□□ 1.3
ABCA2-217ENST00000479446 ABCC11Q96J66 1382 aa23.17■■□□□ 1.3
ABCA2-217ENST00000479446 CCDC69A6NI79 296 aa23.17■■□□□ 1.3
ABCA2-217ENST00000479446 MYL6BP14649 208 aa23.17■■□□□ 1.3
ABCA2-217ENST00000479446 C20orf194Q5TEA3 1177 aa23.17■■□□□ 1.3
ABCA2-217ENST00000479446 SSH1Q8WYL5 1049 aa23.17■■□□□ 1.3
ABCA2-217ENST00000479446 MRC2Q9UBG0 1479 aa23.16■■□□□ 1.3
ABCA2-217ENST00000479446 EXOC6BQ9Y2D4 811 aa23.16■■□□□ 1.3
ABCA2-217ENST00000479446 H0YHG0 523 aa23.16■■□□□ 1.3
ABCA2-217ENST00000479446 MEX3CQ5U5Q3 659 aaKnown RBP23.16■■□□□ 1.3
ABCA2-217ENST00000479446 NKTRP30414 1462 aaKnown RBP23.16■■□□□ 1.3
ABCA2-217ENST00000479446 STIM1Q13586 685 aa23.16■■□□□ 1.3
ABCA2-217ENST00000479446 ZFYVE27Q5T4F4 411 aa23.16■■□□□ 1.3
ABCA2-217ENST00000479446 CEP126Q9P2H0 1117 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms