RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 HOMEZQ8IX15 550 aa10.68□□□□□ -0.7
SSR1-206ENST00000479365 TMC2Q8TDI7 906 aa10.68□□□□□ -0.7
SSR1-206ENST00000479365 SIRT1Q96EB6 747 aa10.68□□□□□ -0.7
SSR1-206ENST00000479365 SCUBE2Q9NQ36 999 aa10.68□□□□□ -0.7
SSR1-206ENST00000479365 FMN2Q9NZ56 1722 aa10.67□□□□□ -0.7
SSR1-206ENST00000479365 DHX57Q6P158 1386 aaKnown RBP10.67□□□□□ -0.7
SSR1-206ENST00000479365 AFF2P51816 1311 aa10.67□□□□□ -0.7
SSR1-206ENST00000479365 PDE4AP27815 886 aa10.67□□□□□ -0.7
SSR1-206ENST00000479365 XPCQ01831 940 aaPredicted RBP10.67□□□□□ -0.7
SSR1-206ENST00000479365 ZNF772Q68DY9 489 aaPredicted RBP10.67□□□□□ -0.7
SSR1-206ENST00000479365 GPHNQ9NQX3 736 aaPredicted RBP10.67□□□□□ -0.7
SSR1-206ENST00000479365 KIF3CO14782 793 aa10.66□□□□□ -0.7
SSR1-206ENST00000479365 FOXO3O43524 673 aa10.66□□□□□ -0.7
SSR1-206ENST00000479365 DCAF11Q8TEB1 546 aa10.66□□□□□ -0.7
SSR1-206ENST00000479365 PRAM1Q96QH2 718 aa10.66□□□□□ -0.7
SSR1-206ENST00000479365 COL22A1Q8NFW1 1626 aaPredicted RBP10.66□□□□□ -0.7
SSR1-206ENST00000479365 DLC1Q96QB1 1528 aa10.65□□□□□ -0.7
SSR1-206ENST00000479365 ADAMTS2O95450 1211 aa10.65□□□□□ -0.7
SSR1-206ENST00000479365 SAFB2Q14151 953 aaKnown RBP eCLIP10.65□□□□□ -0.7
SSR1-206ENST00000479365 MAMSTRQ6ZN01 415 aa10.65□□□□□ -0.7
SSR1-206ENST00000479365 OTUD5Q96G74 571 aa10.65□□□□□ -0.7
SSR1-206ENST00000479365 C8orf37Q96NL8 207 aa10.65□□□□□ -0.7
SSR1-206ENST00000479365 NPHP3Q7Z494 1330 aa10.64□□□□□ -0.71
SSR1-206ENST00000479365 LMOD2Q6P5Q4 547 aa10.64□□□□□ -0.71
SSR1-206ENST00000479365 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.64□□□□□ -0.71
SSR1-206ENST00000479365 SLAIN1Q8ND83 568 aa10.64□□□□□ -0.71
SSR1-206ENST00000479365 DSG2Q14126 1118 aa10.63□□□□□ -0.71
SSR1-206ENST00000479365 MFSD10Q14728 455 aa10.63□□□□□ -0.71
SSR1-206ENST00000479365 DDX27Q96GQ7 796 aaKnown RBP10.63□□□□□ -0.71
SSR1-206ENST00000479365 USP32Q8NFA0 1604 aa10.62□□□□□ -0.71
SSR1-206ENST00000479365 RXRBP28702 533 aa10.62□□□□□ -0.71
SSR1-206ENST00000479365 KCNV2Q8TDN2 545 aa10.62□□□□□ -0.71
SSR1-206ENST00000479365 WDR70Q9NW82 654 aa10.62□□□□□ -0.71
SSR1-206ENST00000479365 TRAK1Q9UPV9 953 aa10.62□□□□□ -0.71
SSR1-206ENST00000479365 ADGRB2O60241 1585 aa10.61□□□□□ -0.71
SSR1-206ENST00000479365 RGS12O14924 1447 aa10.61□□□□□ -0.71
SSR1-206ENST00000479365 KIF1AQ12756 1690 aa10.61□□□□□ -0.71
SSR1-206ENST00000479365 PPP1R15BQ5SWA1 713 aa10.61□□□□□ -0.71
SSR1-206ENST00000479365 NGLY1Q96IV0 654 aa10.61□□□□□ -0.71
SSR1-206ENST00000479365 HIRIP3Q9BW71 556 aaPredicted RBP10.61□□□□□ -0.71
SSR1-206ENST00000479365 QTRT2Q9H974 415 aaKnown RBP10.61□□□□□ -0.71
SSR1-206ENST00000479365 CDK12Q9NYV4 1490 aaPredicted RBP10.61□□□□□ -0.71
SSR1-206ENST00000479365 SPATA31A3Q5VYP0 1347 aa10.6□□□□□ -0.71
SSR1-206ENST00000479365 RGPD8O14715 1765 aaPredicted RBP10.6□□□□□ -0.71
SSR1-206ENST00000479365 FOXK1P85037 733 aa10.6□□□□□ -0.71
SSR1-206ENST00000479365 POGKQ9P215 609 aa10.6□□□□□ -0.71
SSR1-206ENST00000479365 MINK1Q8N4C8 1332 aaPredicted RBP10.59□□□□□ -0.71
SSR1-206ENST00000479365 PRR36Q9H6K5 1346 aa10.59□□□□□ -0.71
SSR1-206ENST00000479365 BRPF1P55201 1214 aaPredicted RBP10.59□□□□□ -0.71
SSR1-206ENST00000479365 KRT28Q7Z3Y7 464 aa10.59□□□□□ -0.71
SSR1-206ENST00000479365 PLPP6Q8IY26 295 aa10.59□□□□□ -0.71
SSR1-206ENST00000479365 FNBP4Q8N3X1 1017 aaPredicted RBP10.59□□□□□ -0.71
SSR1-206ENST00000479365 ANKARQ7Z5J8 1434 aa10.58□□□□□ -0.72
SSR1-206ENST00000479365 BCL9LQ86UU0 1499 aa10.58□□□□□ -0.72
SSR1-206ENST00000479365 RBM6P78332 1123 aaKnown RBP10.58□□□□□ -0.72
SSR1-206ENST00000479365 PMFBP1Q8TBY8 1022 aa10.58□□□□□ -0.72
SSR1-206ENST00000479365 UPF1Q92900 1129 aaKnown RBP eCLIP10.58□□□□□ -0.728e-18■■■□□ 19.2
SSR1-206ENST00000479365 STAC3Q96MF2 364 aa10.58□□□□□ -0.72
SSR1-206ENST00000479365 USP21Q9UK80 565 aa10.58□□□□□ -0.72
SSR1-206ENST00000479365 ATRNO75882 1429 aa10.58□□□□□ -0.72
SSR1-206ENST00000479365 TNS3Q68CZ2 1445 aa10.58□□□□□ -0.72
SSR1-206ENST00000479365 ARHGEF28Q8N1W1 1705 aaKnown RBP10.57□□□□□ -0.72
SSR1-206ENST00000479365 WASLO00401 505 aaPredicted RBP10.56□□□□□ -0.72
SSR1-206ENST00000479365 CABLES1Q8TDN4 633 aa10.56□□□□□ -0.72
SSR1-206ENST00000479365 TULP4Q9NRJ4 1543 aa10.56□□□□□ -0.72
SSR1-206ENST00000479365 MARF1Q9Y4F3 1742 aaKnown RBP10.55□□□□□ -0.72
SSR1-206ENST00000479365 SBNO1A3KN83 1393 aa10.55□□□□□ -0.72
SSR1-206ENST00000479365 NBPF1Q3BBV0 1214 aa10.55□□□□□ -0.72
SSR1-206ENST00000479365 TRPC5Q9UL62 973 aaPredicted RBP10.55□□□□□ -0.72
SSR1-206ENST00000479365 TRPM3Q9HCF6 1732 aaPredicted RBP10.55□□□□□ -0.72
SSR1-206ENST00000479365 SLIT2O94813 1529 aa10.54□□□□□ -0.72
SSR1-206ENST00000479365 PSME1Q06323 249 aa10.54□□□□□ -0.72
SSR1-206ENST00000479365 ATP7BP35670 1465 aa10.54□□□□□ -0.72
SSR1-206ENST00000479365 ABCA3Q99758 1704 aa10.53□□□□□ -0.72
SSR1-206ENST00000479365 KIAA1210Q9ULL0 1709 aa10.53□□□□□ -0.72
SSR1-206ENST00000479365 E2F4Q16254 413 aa10.53□□□□□ -0.72
SSR1-206ENST00000479365 SIN3AQ96ST3 1273 aa10.53□□□□□ -0.72
SSR1-206ENST00000479365 EIF3AQ14152 1382 aaKnown RBP10.52□□□□□ -0.72
SSR1-206ENST00000479365 L3MBTL2Q969R5 705 aa10.52□□□□□ -0.73
SSR1-206ENST00000479365 ARHGEF10O15013 1369 aa10.52□□□□□ -0.73
SSR1-206ENST00000479365 ALS2Q96Q42 1657 aa10.51□□□□□ -0.73
SSR1-206ENST00000479365 UNC5CLQ8IV45 518 aa10.51□□□□□ -0.73
SSR1-206ENST00000479365 NUDT16Q96DE0 195 aaKnown RBP10.51□□□□□ -0.73
SSR1-206ENST00000479365 GJD4Q96KN9 370 aaPredicted RBP10.51□□□□□ -0.73
SSR1-206ENST00000479365 CDK19Q9BWU1 502 aa10.51□□□□□ -0.73
SSR1-206ENST00000479365 EMILIN3Q9NT22 766 aa10.51□□□□□ -0.73
SSR1-206ENST00000479365 GLI3P10071 1580 aa10.51□□□□□ -0.73
SSR1-206ENST00000479365 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.5□□□□□ -0.73
SSR1-206ENST00000479365 RALGAPBQ86X10 1494 aa10.5□□□□□ -0.73
SSR1-206ENST00000479365 CAMK2BQ13554 666 aa10.5□□□□□ -0.73
SSR1-206ENST00000479365 GPRASP1Q5JY77 1395 aa10.5□□□□□ -0.73
SSR1-206ENST00000479365 FAM83GA6ND36 823 aa10.49□□□□□ -0.73
SSR1-206ENST00000479365 NGDNQ8NEJ9 315 aaKnown RBP10.49□□□□□ -0.73
SSR1-206ENST00000479365 PLCH1Q4KWH8 1693 aa10.49□□□□□ -0.73
SSR1-206ENST00000479365 TOPAZ1Q8N9V7 1692 aa10.49□□□□□ -0.73
SSR1-206ENST00000479365 CRYBG1Q9Y4K1 1723 aa10.48□□□□□ -0.73
SSR1-206ENST00000479365 HOXB3P14651 431 aaPredicted RBP10.48□□□□□ -0.73
SSR1-206ENST00000479365 POLR3AO14802 1390 aaPredicted RBP10.48□□□□□ -0.73
SSR1-206ENST00000479365 NEUROD1Q13562 356 aa10.47□□□□□ -0.73
SSR1-206ENST00000479365 VPS72Q15906 364 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms