RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 TRPM3Q9HCF6 1732 aaPredicted RBP16.8■□□□□ 0.28
CNKSR3-204ENST00000479339 BCL9LQ86UU0 1499 aa16.78■□□□□ 0.28
CNKSR3-204ENST00000479339 TRPM1Q7Z4N2 1603 aa16.78■□□□□ 0.28
CNKSR3-204ENST00000479339 MRE11P49959 708 aa16.78■□□□□ 0.28
CNKSR3-204ENST00000479339 NGDNQ8NEJ9 315 aaKnown RBP16.78■□□□□ 0.28
CNKSR3-204ENST00000479339 ITSN1Q15811 1721 aa16.78■□□□□ 0.28
CNKSR3-204ENST00000479339 RGS12O14924 1447 aa16.77■□□□□ 0.28
CNKSR3-204ENST00000479339 RBM10P98175 930 aaKnown RBP16.77■□□□□ 0.27
CNKSR3-204ENST00000479339 SLIT2O94813 1529 aa16.77■□□□□ 0.27
CNKSR3-204ENST00000479339 AAMPQ13685 434 aa16.76■□□□□ 0.27
CNKSR3-204ENST00000479339 LMOD2Q6P5Q4 547 aa16.76■□□□□ 0.27
CNKSR3-204ENST00000479339 CCDC61Q9Y6R9 512 aa16.76■□□□□ 0.27
CNKSR3-204ENST00000479339 ALS2Q96Q42 1657 aa16.76■□□□□ 0.27
CNKSR3-204ENST00000479339 TOPAZ1Q8N9V7 1692 aa16.76■□□□□ 0.27
CNKSR3-204ENST00000479339 PLEKHG3A1L390 1219 aa16.75■□□□□ 0.27
CNKSR3-204ENST00000479339 ESPNB1AK53 854 aa16.75■□□□□ 0.27
CNKSR3-204ENST00000479339 CABLES1Q8TDN4 633 aa16.75■□□□□ 0.27
CNKSR3-204ENST00000479339 POLR3AO14802 1390 aaPredicted RBP16.75■□□□□ 0.27
CNKSR3-204ENST00000479339 USP47Q96K76 1375 aa16.75■□□□□ 0.27
CNKSR3-204ENST00000479339 HAP1P54257 671 aaPredicted RBP16.75■□□□□ 0.27
CNKSR3-204ENST00000479339 MAP7D2Q96T17 732 aa16.75■□□□□ 0.27
CNKSR3-204ENST00000479339 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
CNKSR3-204ENST00000479339 ABCA3Q99758 1704 aa16.74■□□□□ 0.27
CNKSR3-204ENST00000479339 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.74■□□□□ 0.27
CNKSR3-204ENST00000479339 UNC5CLQ8IV45 518 aa16.74■□□□□ 0.27
CNKSR3-204ENST00000479339 QRICH2Q9H0J4 1663 aa16.73■□□□□ 0.27
CNKSR3-204ENST00000479339 BLMP54132 1417 aaPredicted RBP16.72■□□□□ 0.27
CNKSR3-204ENST00000479339 SRPK2P78362 688 aaKnown RBP16.72■□□□□ 0.27
CNKSR3-204ENST00000479339 UPF1Q92900 1129 aaKnown RBP eCLIP16.72■□□□□ 0.27
CNKSR3-204ENST00000479339 ACEP12821 1306 aa16.72■□□□□ 0.27
CNKSR3-204ENST00000479339 TERF1P54274 439 aa16.71■□□□□ 0.27
CNKSR3-204ENST00000479339 SKAP1Q86WV1 359 aa16.71■□□□□ 0.27
CNKSR3-204ENST00000479339 GJD4Q96KN9 370 aaPredicted RBP16.71■□□□□ 0.27
CNKSR3-204ENST00000479339 ANTXR1Q9H6X2 564 aa16.71■□□□□ 0.27
CNKSR3-204ENST00000479339 FGD1P98174 961 aa16.7■□□□□ 0.26
CNKSR3-204ENST00000479339 NLRP13Q86W25 1043 aa16.7■□□□□ 0.26
CNKSR3-204ENST00000479339 MYH16Q9H6N6 1097 aa16.7■□□□□ 0.26
CNKSR3-204ENST00000479339 CABP2Q9NPB3 220 aa16.7■□□□□ 0.26
CNKSR3-204ENST00000479339 PPIP5K1Q6PFW1 1433 aa16.69■□□□□ 0.26
CNKSR3-204ENST00000479339 FAM83GA6ND36 823 aa16.69■□□□□ 0.26
CNKSR3-204ENST00000479339 NWD2Q9ULI1 1742 aa16.68■□□□□ 0.26
CNKSR3-204ENST00000479339 EVC2Q86UK5 1308 aa16.68■□□□□ 0.26
CNKSR3-204ENST00000479339 CRYBG1Q9Y4K1 1723 aa16.68■□□□□ 0.26
CNKSR3-204ENST00000479339 PLIN1O60240 522 aa16.68■□□□□ 0.26
CNKSR3-204ENST00000479339 VPS72Q15906 364 aa16.68■□□□□ 0.26
CNKSR3-204ENST00000479339 RALGAPBQ86X10 1494 aa16.68■□□□□ 0.26
CNKSR3-204ENST00000479339 PLCH1Q4KWH8 1693 aa16.67■□□□□ 0.26
CNKSR3-204ENST00000479339 USP19O94966 1318 aa16.67■□□□□ 0.26
CNKSR3-204ENST00000479339 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.67■□□□□ 0.26
CNKSR3-204ENST00000479339 PANK2Q9BZ23 570 aa16.67■□□□□ 0.26
CNKSR3-204ENST00000479339 GLI3P10071 1580 aa16.66■□□□□ 0.26
CNKSR3-204ENST00000479339 TRIM44Q96DX7 344 aaPredicted RBP16.66■□□□□ 0.26
CNKSR3-204ENST00000479339 ATAD2Q6PL18 1390 aa16.65■□□□□ 0.26
CNKSR3-204ENST00000479339 PARD3Q8TEW0 1356 aa16.65■□□□□ 0.26
CNKSR3-204ENST00000479339 COL14A1Q05707 1796 aaKnown RBP16.65■□□□□ 0.26
CNKSR3-204ENST00000479339 MCM4P33991 863 aa16.65■□□□□ 0.26
CNKSR3-204ENST00000479339 SBNO2Q9Y2G9 1366 aa16.65■□□□□ 0.26
CNKSR3-204ENST00000479339 SMAP1Q8IYB5 467 aaPredicted RBP16.64■□□□□ 0.25
CNKSR3-204ENST00000479339 CARD11Q9BXL7 1154 aa16.64■□□□□ 0.25
CNKSR3-204ENST00000479339 GRPEL1Q9HAV7 217 aa16.64■□□□□ 0.25
CNKSR3-204ENST00000479339 CABP1Q9NZU7 370 aa16.64■□□□□ 0.25
CNKSR3-204ENST00000479339 MTERF4Q7Z6M4 381 aaKnown RBP16.63■□□□□ 0.25
CNKSR3-204ENST00000479339 MAPK8IP3Q9UPT6 1336 aa16.63■□□□□ 0.25
CNKSR3-204ENST00000479339 SENP3-EIF4A1A0A087X0R7 540 aa16.63■□□□□ 0.25
CNKSR3-204ENST00000479339 A0A0U1RQG5 324 aaPredicted RBP16.63■□□□□ 0.25
CNKSR3-204ENST00000479339 CDCA7LQ96GN5 454 aa16.63■□□□□ 0.25
CNKSR3-204ENST00000479339 SLKQ9H2G2 1235 aaPredicted RBP16.63■□□□□ 0.25
CNKSR3-204ENST00000479339 PHRF1Q9P1Y6 1649 aaKnown RBP16.62■□□□□ 0.25
CNKSR3-204ENST00000479339 NRAPQ86VF7 1730 aa16.62■□□□□ 0.25
CNKSR3-204ENST00000479339 BTG4Q9NY30 223 aa16.62■□□□□ 0.25
CNKSR3-204ENST00000479339 USP6P35125 1406 aa16.61■□□□□ 0.25
CNKSR3-204ENST00000479339 ONECUT3O60422 494 aaPredicted RBP16.61■□□□□ 0.25
CNKSR3-204ENST00000479339 CNGB1Q14028 1251 aaPredicted RBP16.61■□□□□ 0.25
CNKSR3-204ENST00000479339 NUTM2GQ5VZR2 741 aa16.61■□□□□ 0.25
CNKSR3-204ENST00000479339 ABTB2Q8N961 1025 aa16.61■□□□□ 0.25
CNKSR3-204ENST00000479339 POLR3GLQ9BT43 218 aa16.61■□□□□ 0.25
CNKSR3-204ENST00000479339 PRDM11Q9NQV5 511 aa16.61■□□□□ 0.25
CNKSR3-204ENST00000479339 ERBB4Q15303 1308 aa16.61■□□□□ 0.25
CNKSR3-204ENST00000479339 KIAA1211Q6ZU35 1233 aa16.6■□□□□ 0.25
CNKSR3-204ENST00000479339 SSH2Q76I76 1423 aa16.6■□□□□ 0.25
CNKSR3-204ENST00000479339 KIAA0232Q92628 1395 aa16.6■□□□□ 0.25
CNKSR3-204ENST00000479339 DDX11L8A8MPP1 907 aa16.6■□□□□ 0.25
CNKSR3-204ENST00000479339 RGS3P49796 1198 aa16.6■□□□□ 0.25
CNKSR3-204ENST00000479339 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.6■□□□□ 0.25
CNKSR3-204ENST00000479339 TRAK2O60296 914 aa16.59■□□□□ 0.25
CNKSR3-204ENST00000479339 C20orf194Q5TEA3 1177 aa16.59■□□□□ 0.25
CNKSR3-204ENST00000479339 UPF2Q9HAU5 1272 aaKnown RBP16.59■□□□□ 0.25
CNKSR3-204ENST00000479339 CCDC9Q9Y3X0 531 aaKnown RBP16.59■□□□□ 0.25
CNKSR3-204ENST00000479339 SEPT12Q8IYM1 358 aa16.58■□□□□ 0.25
CNKSR3-204ENST00000479339 CPDO75976 1380 aa16.58■□□□□ 0.24
CNKSR3-204ENST00000479339 NRKQ7Z2Y5 1582 aa16.58■□□□□ 0.24
CNKSR3-204ENST00000479339 ZNF692Q9BU19 519 aaPredicted RBP16.58■□□□□ 0.24
CNKSR3-204ENST00000479339 OFD1O75665 1012 aa16.57■□□□□ 0.24
CNKSR3-204ENST00000479339 NCLP19338 710 aaKnown RBP16.57■□□□□ 0.24
CNKSR3-204ENST00000479339 ZC3H6P61129 1189 aaKnown RBP16.57■□□□□ 0.24
CNKSR3-204ENST00000479339 CHMP5Q9NZZ3 219 aa16.57■□□□□ 0.24
CNKSR3-204ENST00000479339 SPATA31A5Q5VU36 1347 aa16.56■□□□□ 0.24
CNKSR3-204ENST00000479339 SPATA31A7Q8IWB4 1347 aa16.56■□□□□ 0.24
CNKSR3-204ENST00000479339 CHRNA2Q15822 529 aa16.56■□□□□ 0.24
CNKSR3-204ENST00000479339 ARXQ96QS3 562 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms