RNA–Protein interactions for RNA: ENST00000478687.5

VRK2-209, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,021 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-209ENST00000478687 TCOF1Q13428 1488 aaKnown RBP8.85□□□□□ -0.99
VRK2-209ENST00000478687 FOXC1Q12948 553 aa8.85□□□□□ -0.99
VRK2-209ENST00000478687 PTPRKQ15262 1439 aa8.85□□□□□ -0.99
VRK2-209ENST00000478687 PLXNC1O60486 1568 aa8.85□□□□□ -0.99
VRK2-209ENST00000478687 GPATCH8Q9UKJ3 1502 aaKnown RBP8.85□□□□□ -0.99
VRK2-209ENST00000478687 A2MP01023 1474 aa8.84□□□□□ -0.99
VRK2-209ENST00000478687 MLLT3P42568 568 aaPredicted RBP8.84□□□□□ -0.99
VRK2-209ENST00000478687 PIP4K2BP78356 416 aa8.84□□□□□ -0.99
VRK2-209ENST00000478687 INO80Q9ULG1 1556 aaPredicted RBP8.83□□□□□ -1
VRK2-209ENST00000478687 C11orf95C9JLR9 678 aaPredicted RBP8.83□□□□□ -1
VRK2-209ENST00000478687 AXIN1O15169 862 aa8.83□□□□□ -1
VRK2-209ENST00000478687 HSPA1LP34931 641 aa8.83□□□□□ -1
VRK2-209ENST00000478687 WDR70Q9NW82 654 aa8.83□□□□□ -1
VRK2-209ENST00000478687 FYCO1Q9BQS8 1478 aa8.83□□□□□ -1
VRK2-209ENST00000478687 INSM1Q01101 510 aaPredicted RBP8.82□□□□□ -1
VRK2-209ENST00000478687 FAM161AQ3B820 660 aa8.82□□□□□ -1
VRK2-209ENST00000478687 SPRYD3Q8NCJ5 442 aa8.82□□□□□ -1
VRK2-209ENST00000478687 SPSB2Q99619 263 aa8.82□□□□□ -1
VRK2-209ENST00000478687 CFDP1Q9UEE9 299 aaPredicted RBP8.82□□□□□ -1
VRK2-209ENST00000478687 MED1Q15648 1581 aaPredicted RBP8.82□□□□□ -1
VRK2-209ENST00000478687 KIAA1107Q9UPP5 1409 aa8.81□□□□□ -1
VRK2-209ENST00000478687 DNMT1P26358 1616 aaKnown RBP8.81□□□□□ -1
VRK2-209ENST00000478687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.81□□□□□ -1
VRK2-209ENST00000478687 THAP11Q96EK4 314 aa8.81□□□□□ -1
VRK2-209ENST00000478687 TOM1O60784 492 aa8.8□□□□□ -1
VRK2-209ENST00000478687 CCNB3Q8WWL7 1395 aa8.8□□□□□ -1
VRK2-209ENST00000478687 A2ML1A8K2U0 1454 aa8.8□□□□□ -1
VRK2-209ENST00000478687 PLEKHH2Q8IVE3 1493 aa8.8□□□□□ -1
VRK2-209ENST00000478687 ZNF644Q9H582 1327 aaPredicted RBP8.8□□□□□ -1
VRK2-209ENST00000478687 NEURL4Q96JN8 1562 aa8.79□□□□□ -1
VRK2-209ENST00000478687 LOC100996750A0A140TA64 210 aa8.79□□□□□ -1
VRK2-209ENST00000478687 PUS10Q3MIT2 529 aaKnown RBP8.79□□□□□ -1
VRK2-209ENST00000478687 FBXO31Q5XUX0 539 aaPredicted RBP8.79□□□□□ -1
VRK2-209ENST00000478687 KRTAP4-6Q9BYQ5 205 aa8.79□□□□□ -1
VRK2-209ENST00000478687 ADGBQ8N7X0 1667 aa8.78□□□□□ -1
VRK2-209ENST00000478687 SHANK2Q9UPX8 1470 aa8.78□□□□□ -1
VRK2-209ENST00000478687 POLR1AO95602 1720 aaPredicted RBP8.78□□□□□ -1
VRK2-209ENST00000478687 FCF1Q9Y324 198 aaKnown RBP8.78□□□□□ -1
VRK2-209ENST00000478687 CPS1P31327 1500 aa8.78□□□□□ -1
VRK2-209ENST00000478687 TNRQ92752 1358 aa8.77□□□□□ -1.01
VRK2-209ENST00000478687 CYP4X1Q8N118 509 aa8.77□□□□□ -1.01
VRK2-209ENST00000478687 PXYLP1Q8TE99 480 aa8.77□□□□□ -1.01
VRK2-209ENST00000478687 MTUS2Q5JR59 1369 aa8.76□□□□□ -1.01
VRK2-209ENST00000478687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.76□□□□□ -1.01
VRK2-209ENST00000478687 KIF3BO15066 747 aa8.76□□□□□ -1.01
VRK2-209ENST00000478687 MORN1Q5T089 497 aa8.76□□□□□ -1.01
VRK2-209ENST00000478687 FAM160A2Q8N612 972 aaPredicted RBP8.76□□□□□ -1.01
VRK2-209ENST00000478687 MBD5Q9P267 1494 aa8.76□□□□□ -1.01
VRK2-209ENST00000478687 DHX29Q7Z478 1369 aaKnown RBP8.75□□□□□ -1.01
VRK2-209ENST00000478687 TIAM1Q13009 1591 aa8.75□□□□□ -1.01
VRK2-209ENST00000478687 VWDEQ8N2E2 1590 aa8.75□□□□□ -1.01
VRK2-209ENST00000478687 TERTO14746 1132 aaKnown RBP8.75□□□□□ -1.01
VRK2-209ENST00000478687 CD2BP2O95400 341 aaKnown RBP8.75□□□□□ -1.01
VRK2-209ENST00000478687 SNRPBP14678 240 aaKnown RBP8.75□□□□□ -1.01
VRK2-209ENST00000478687 ANKLE2Q86XL3 938 aa8.75□□□□□ -1.01
VRK2-209ENST00000478687 ALKQ9UM73 1620 aa8.75□□□□□ -1.01
VRK2-209ENST00000478687 PZPP20742 1482 aa8.75□□□□□ -1.01
VRK2-209ENST00000478687 WASHC2CQ9Y4E1 1318 aa8.75□□□□□ -1.01
VRK2-209ENST00000478687 SMPD1P17405 629 aa8.74□□□□□ -1.01
VRK2-209ENST00000478687 ATP13A2Q9NQ11 1180 aa8.74□□□□□ -1.01
VRK2-209ENST00000478687 KDM5DQ9BY66 1539 aa8.74□□□□□ -1.01
VRK2-209ENST00000478687 RTEL1-TNFRSF6BF6WH68 1400 aa8.73□□□□□ -1.01
VRK2-209ENST00000478687 NPHP4O75161 1426 aaPredicted RBP8.73□□□□□ -1.01
VRK2-209ENST00000478687 LORP23490 312 aaPredicted RBP8.73□□□□□ -1.01
VRK2-209ENST00000478687 THEMISQ8N1K5 641 aaPredicted RBP8.73□□□□□ -1.01
VRK2-209ENST00000478687 ARHGEF1Q92888 912 aaKnown RBP8.73□□□□□ -1.01
VRK2-209ENST00000478687 TRIM47Q96LD4 638 aa8.73□□□□□ -1.01
VRK2-209ENST00000478687 UGGT1Q9NYU2 1555 aa8.73□□□□□ -1.01
VRK2-209ENST00000478687 MIA2Q96PC5 1412 aa8.72□□□□□ -1.01
VRK2-209ENST00000478687 MED14O60244 1454 aa8.71□□□□□ -1.01
VRK2-209ENST00000478687 CCDC141Q6ZP82 1450 aa8.71□□□□□ -1.01
VRK2-209ENST00000478687 NLRP1Q9C000 1473 aa8.71□□□□□ -1.01
VRK2-209ENST00000478687 EHBP1L1Q8N3D4 1523 aa8.71□□□□□ -1.01
VRK2-209ENST00000478687 FAM135AQ9P2D6 1515 aa8.71□□□□□ -1.01
VRK2-209ENST00000478687 WNT7AO00755 349 aa8.71□□□□□ -1.02
VRK2-209ENST00000478687 PRDM9Q9NQV7 894 aa8.71□□□□□ -1.02
VRK2-209ENST00000478687 SALL2Q9Y467 1007 aaPredicted RBP8.71□□□□□ -1.02
VRK2-209ENST00000478687 IQGAP1P46940 1657 aa8.71□□□□□ -1.02
VRK2-209ENST00000478687 LRRC7Q96NW7 1537 aa8.7□□□□□ -1.02
VRK2-209ENST00000478687 DEPDC5O75140 1603 aa8.7□□□□□ -1.02
VRK2-209ENST00000478687 METTL3Q86U44 580 aaKnown RBP8.7□□□□□ -1.02
VRK2-209ENST00000478687 STRCP1A6NGW2 1772 aa8.7□□□□□ -1.02
VRK2-209ENST00000478687 CEP162Q5TB80 1403 aa8.7□□□□□ -1.02
VRK2-209ENST00000478687 CAMSAP2Q08AD1 1489 aa8.7□□□□□ -1.02
VRK2-209ENST00000478687 OATP04181 439 aa8.69□□□□□ -1.02
VRK2-209ENST00000478687 RNF17Q9BXT8 1623 aaKnown RBP8.69□□□□□ -1.02
VRK2-209ENST00000478687 TTC24A2A3L6 582 aaPredicted RBP8.68□□□□□ -1.02
VRK2-209ENST00000478687 FUT2Q10981 343 aa8.68□□□□□ -1.02
VRK2-209ENST00000478687 BRICD5Q6PL45 260 aa8.68□□□□□ -1.02
VRK2-209ENST00000478687 SNIP1Q8TAD8 396 aaKnown RBP8.68□□□□□ -1.02
VRK2-209ENST00000478687 RGS17Q9UGC6 210 aaPredicted RBP8.68□□□□□ -1.02
VRK2-209ENST00000478687 SLC27A5Q9Y2P5 690 aa8.68□□□□□ -1.02
VRK2-209ENST00000478687 SYNMO15061 1565 aa8.67□□□□□ -1.02
VRK2-209ENST00000478687 FCHSD2O94868 740 aa8.67□□□□□ -1.02
VRK2-209ENST00000478687 NCOA2Q15596 1464 aa8.67□□□□□ -1.02
VRK2-209ENST00000478687 MSS51Q4VC12 460 aa8.67□□□□□ -1.02
VRK2-209ENST00000478687 KCNV2Q8TDN2 545 aa8.67□□□□□ -1.02
VRK2-209ENST00000478687 SENP2Q9HC62 589 aa8.67□□□□□ -1.02
VRK2-209ENST00000478687 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.67□□□□□ -1.02
VRK2-209ENST00000478687 ABCC3O15438 1527 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms