RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 HSP90AA1P07900 732 aaKnown RBP18.64■□□□□ 0.57
U2AF1-210ENST00000478282 TNPO1Q92973 898 aaKnown RBP18.64■□□□□ 0.57
U2AF1-210ENST00000478282 SIRT1Q96EB6 747 aa18.63■□□□□ 0.57
U2AF1-210ENST00000478282 ANKLE2Q86XL3 938 aa18.63■□□□□ 0.57
U2AF1-210ENST00000478282 PTPRUQ92729 1446 aa18.63■□□□□ 0.57
U2AF1-210ENST00000478282 NWD1Q149M9 1564 aa18.63■□□□□ 0.57
U2AF1-210ENST00000478282 ERBB4Q15303 1308 aa18.62■□□□□ 0.57
U2AF1-210ENST00000478282 ANKRD36BQ8N2N9 1353 aa18.62■□□□□ 0.57
U2AF1-210ENST00000478282 GBP4Q96PP9 640 aa18.62■□□□□ 0.57
U2AF1-210ENST00000478282 ZBTB40Q9NUA8 1239 aa18.62■□□□□ 0.57
U2AF1-210ENST00000478282 NUCB1Q02818 461 aa18.62■□□□□ 0.57
U2AF1-210ENST00000478282 TMEM57Q8N5G2 664 aa18.62■□□□□ 0.57
U2AF1-210ENST00000478282 NOB1Q9ULX3 412 aaKnown RBP18.62■□□□□ 0.57
U2AF1-210ENST00000478282 NPHP4O75161 1426 aaPredicted RBP18.62■□□□□ 0.57
U2AF1-210ENST00000478282 RRP9O43818 475 aaKnown RBP18.61■□□□□ 0.57
U2AF1-210ENST00000478282 TMEM132EQ6IEE7 984 aa18.61■□□□□ 0.57
U2AF1-210ENST00000478282 FAM135BQ49AJ0 1406 aa18.61■□□□□ 0.57
U2AF1-210ENST00000478282 RAB3GAP1Q15042 981 aa18.61■□□□□ 0.57
U2AF1-210ENST00000478282 HSP90AB1P08238 724 aaKnown RBP18.6■□□□□ 0.57
U2AF1-210ENST00000478282 TMPOP42166 694 aaKnown RBP18.6■□□□□ 0.57
U2AF1-210ENST00000478282 HSP90AA2PQ14568 343 aaPredicted RBP18.6■□□□□ 0.57
U2AF1-210ENST00000478282 SKOR2Q2VWA4 1001 aaPredicted RBP18.6■□□□□ 0.57
U2AF1-210ENST00000478282 PLEKHF1Q96S99 279 aa18.6■□□□□ 0.57
U2AF1-210ENST00000478282 TRIM35Q9UPQ4 493 aa18.6■□□□□ 0.57
U2AF1-210ENST00000478282 PTMSP20962 102 aa18.59■□□□□ 0.57
U2AF1-210ENST00000478282 PUS7Q96PZ0 661 aaKnown RBP18.59■□□□□ 0.57
U2AF1-210ENST00000478282 IL16Q14005 1332 aa18.59■□□□□ 0.57
U2AF1-210ENST00000478282 GAS2L3Q86XJ1 694 aa18.59■□□□□ 0.57
U2AF1-210ENST00000478282 TRIM44Q96DX7 344 aaPredicted RBP18.59■□□□□ 0.57
U2AF1-210ENST00000478282 PTCH1Q13635 1447 aa18.59■□□□□ 0.57
U2AF1-210ENST00000478282 KIF16BQ96L93 1317 aa18.59■□□□□ 0.57
U2AF1-210ENST00000478282 TULP4Q9NRJ4 1543 aa18.58■□□□□ 0.56
U2AF1-210ENST00000478282 LNPKQ9C0E8 428 aa18.57■□□□□ 0.56
U2AF1-210ENST00000478282 IPO8O15397 1037 aaKnown RBP18.57■□□□□ 0.56
U2AF1-210ENST00000478282 BMP2KLQ5H9B9 411 aa18.57■□□□□ 0.56
U2AF1-210ENST00000478282 CHD1LQ86WJ1 897 aa18.57■□□□□ 0.56
U2AF1-210ENST00000478282 COL3A1P02461 1466 aaPredicted RBP18.57■□□□□ 0.56
U2AF1-210ENST00000478282 EVC2Q86UK5 1308 aa18.56■□□□□ 0.56
U2AF1-210ENST00000478282 KIF2CQ99661 725 aa18.56■□□□□ 0.56
U2AF1-210ENST00000478282 U2SURPO15042 1029 aaKnown RBP18.55■□□□□ 0.56
U2AF1-210ENST00000478282 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.54■□□□□ 0.56
U2AF1-210ENST00000478282 NCKAP5LQ9HCH0 1330 aa18.53■□□□□ 0.56
U2AF1-210ENST00000478282 STRCP1A6NGW2 1772 aa18.52■□□□□ 0.56
U2AF1-210ENST00000478282 ALDH1L2Q3SY69 923 aa18.52■□□□□ 0.56
U2AF1-210ENST00000478282 K7ELQ4 463 aaPredicted RBP18.52■□□□□ 0.55
U2AF1-210ENST00000478282 ROBO2Q9HCK4 1378 aa18.51■□□□□ 0.55
U2AF1-210ENST00000478282 CD2BP2O95400 341 aaKnown RBP18.51■□□□□ 0.55
U2AF1-210ENST00000478282 RIPK4P57078 832 aa18.51■□□□□ 0.55
U2AF1-210ENST00000478282 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
U2AF1-210ENST00000478282 ANKRD26Q9UPS8 1709 aa18.5■□□□□ 0.55
U2AF1-210ENST00000478282 CCDC173Q0VFZ6 552 aa18.5■□□□□ 0.55
U2AF1-210ENST00000478282 TPM2P07951 284 aa18.49■□□□□ 0.55
U2AF1-210ENST00000478282 FOXD4L1Q9NU39 408 aa18.49■□□□□ 0.55
U2AF1-210ENST00000478282 A0A1W2PP64 1363 aa18.49■□□□□ 0.55
U2AF1-210ENST00000478282 CLEC17AQ6ZS10 378 aa18.49■□□□□ 0.55
U2AF1-210ENST00000478282 GCC1Q96CN9 775 aa18.49■□□□□ 0.55
U2AF1-210ENST00000478282 PPP1R9BQ96SB3 815 aa18.49■□□□□ 0.55
U2AF1-210ENST00000478282 CABP2Q9NPB3 220 aa18.49■□□□□ 0.55
U2AF1-210ENST00000478282 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
U2AF1-210ENST00000478282 IBTKQ9P2D0 1353 aaPredicted RBP18.48■□□□□ 0.55
U2AF1-210ENST00000478282 ANKRD45Q5TZF3 282 aa18.48■□□□□ 0.55
U2AF1-210ENST00000478282 TBC1D9Q6ZT07 1266 aa18.48■□□□□ 0.55
U2AF1-210ENST00000478282 GOLGA6L22H0YM25 854 aa18.48■□□□□ 0.55
U2AF1-210ENST00000478282 SSFA2P28290 1259 aa18.48■□□□□ 0.55
U2AF1-210ENST00000478282 VSIG10Q8N0Z9 540 aa18.48■□□□□ 0.55
U2AF1-210ENST00000478282 PKNOX2Q96KN3 472 aa18.48■□□□□ 0.55
U2AF1-210ENST00000478282 BRPF1P55201 1214 aaPredicted RBP18.47■□□□□ 0.55
U2AF1-210ENST00000478282 GGNBP2Q9H3C7 697 aa18.47■□□□□ 0.55
U2AF1-210ENST00000478282 NASPP49321 788 aaPredicted RBP18.46■□□□□ 0.55
U2AF1-210ENST00000478282 PRAM1Q96QH2 718 aa18.46■□□□□ 0.55
U2AF1-210ENST00000478282 HSPA2P54652 639 aa18.46■□□□□ 0.55
U2AF1-210ENST00000478282 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
U2AF1-210ENST00000478282 KLHL40Q2TBA0 621 aa18.46■□□□□ 0.55
U2AF1-210ENST00000478282 ZNF428Q96B54 188 aa18.46■□□□□ 0.55
U2AF1-210ENST00000478282 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
U2AF1-210ENST00000478282 AMOTL2Q9Y2J4 779 aa18.46■□□□□ 0.55
U2AF1-210ENST00000478282 CHMP4BQ9H444 224 aaKnown RBP18.45■□□□□ 0.54
U2AF1-210ENST00000478282 STK26Q9P289 416 aa18.45■□□□□ 0.54
U2AF1-210ENST00000478282 NALCNQ8IZF0 1738 aa18.45■□□□□ 0.54
U2AF1-210ENST00000478282 ZBTB7BO15156 539 aaPredicted RBP18.45■□□□□ 0.54
U2AF1-210ENST00000478282 TOPAZ1Q8N9V7 1692 aa18.44■□□□□ 0.54
U2AF1-210ENST00000478282 ZSCAN30Q86W11 494 aa18.44■□□□□ 0.54
U2AF1-210ENST00000478282 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
U2AF1-210ENST00000478282 BAG4O95429 457 aaKnown RBP18.43■□□□□ 0.54
U2AF1-210ENST00000478282 DIAPH1O60610 1272 aaKnown RBP18.43■□□□□ 0.54
U2AF1-210ENST00000478282 KCNA6P17658 529 aa18.43■□□□□ 0.54
U2AF1-210ENST00000478282 DDX49Q9Y6V7 483 aaKnown RBP18.43■□□□□ 0.54
U2AF1-210ENST00000478282 ANP32BQ92688 251 aaKnown RBP18.43■□□□□ 0.54
U2AF1-210ENST00000478282 ZMYND15Q9H091 742 aa18.43■□□□□ 0.54
U2AF1-210ENST00000478282 AK9Q5TCS8 1911 aa18.42■□□□□ 0.54
U2AF1-210ENST00000478282 WAPLQ7Z5K2 1190 aa18.42■□□□□ 0.54
U2AF1-210ENST00000478282 XIRP1Q702N8 1843 aaKnown RBP18.42■□□□□ 0.54
U2AF1-210ENST00000478282 LRRC7Q96NW7 1537 aa18.42■□□□□ 0.54
U2AF1-210ENST00000478282 PNPLA6Q8IY17 1366 aa18.42■□□□□ 0.54
U2AF1-210ENST00000478282 CDC42BPGQ6DT37 1551 aa18.41■□□□□ 0.54
U2AF1-210ENST00000478282 CDC45O75419 566 aa18.41■□□□□ 0.54
U2AF1-210ENST00000478282 C1orf115Q9H7X2 142 aa18.41■□□□□ 0.54
U2AF1-210ENST00000478282 FYB1O15117 783 aa18.41■□□□□ 0.54
U2AF1-210ENST00000478282 KIAA1211Q6ZU35 1233 aa18.41■□□□□ 0.54
U2AF1-210ENST00000478282 ARHGAP45Q92619 1136 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms