RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 LMOD3Q0VAK6 560 aa9.85□□□□□ -0.83
SYCP3-204ENST00000478139 SULT6B1Q6IMI4 303 aa9.85□□□□□ -0.83
SYCP3-204ENST00000478139 SKAP1Q86WV1 359 aa9.85□□□□□ -0.83
SYCP3-204ENST00000478139 TTC5Q8N0Z6 440 aa9.85□□□□□ -0.83
SYCP3-204ENST00000478139 CDCA7LQ96GN5 454 aa9.85□□□□□ -0.83
SYCP3-204ENST00000478139 FAM98CQ17RN3 349 aaKnown RBP9.85□□□□□ -0.83
SYCP3-204ENST00000478139 EMILIN1Q9Y6C2 1016 aa9.85□□□□□ -0.83
SYCP3-204ENST00000478139 DCCP43146 1447 aa9.85□□□□□ -0.83
SYCP3-204ENST00000478139 SBNO2Q9Y2G9 1366 aa9.84□□□□□ -0.83
SYCP3-204ENST00000478139 PLIN1O60240 522 aa9.84□□□□□ -0.83
SYCP3-204ENST00000478139 ZNF530Q6P9A1 599 aaPredicted RBP9.84□□□□□ -0.83
SYCP3-204ENST00000478139 CALD1Q05682 793 aaKnown RBP9.84□□□□□ -0.83
SYCP3-204ENST00000478139 A0A1W2PP64 1363 aa9.84□□□□□ -0.83
SYCP3-204ENST00000478139 HMGB2P26583 209 aaKnown RBP9.83□□□□□ -0.84
SYCP3-204ENST00000478139 USHBP1Q8N6Y0 703 aa9.83□□□□□ -0.84
SYCP3-204ENST00000478139 HSP90AB1P08238 724 aaKnown RBP9.83□□□□□ -0.84
SYCP3-204ENST00000478139 PDE4AP27815 886 aa9.83□□□□□ -0.84
SYCP3-204ENST00000478139 FBLN1P23142 703 aa9.83□□□□□ -0.84
SYCP3-204ENST00000478139 CDCA7Q9BWT1 371 aaPredicted RBP9.83□□□□□ -0.84
SYCP3-204ENST00000478139 EDC4Q6P2E9 1401 aaKnown RBP9.82□□□□□ -0.84
SYCP3-204ENST00000478139 SIGLEC1Q9BZZ2 1709 aa9.82□□□□□ -0.84
SYCP3-204ENST00000478139 RBM6P78332 1123 aaKnown RBP9.82□□□□□ -0.84
SYCP3-204ENST00000478139 UNC5CLQ8IV45 518 aa9.82□□□□□ -0.84
SYCP3-204ENST00000478139 TCP11L2Q8N4U5 519 aa9.82□□□□□ -0.84
SYCP3-204ENST00000478139 KIAA0232Q92628 1395 aa9.82□□□□□ -0.84
SYCP3-204ENST00000478139 GAS2L2Q8NHY3 880 aa9.82□□□□□ -0.84
SYCP3-204ENST00000478139 SETBP1Q9Y6X0 1596 aa9.82□□□□□ -0.84
SYCP3-204ENST00000478139 NSD2O96028 1365 aa9.81□□□□□ -0.84
SYCP3-204ENST00000478139 TCERG1O14776 1098 aaKnown RBP9.81□□□□□ -0.84
SYCP3-204ENST00000478139 IL2RBP14784 551 aa9.81□□□□□ -0.84
SYCP3-204ENST00000478139 HSP90AB2PQ58FF8 381 aa9.81□□□□□ -0.84
SYCP3-204ENST00000478139 IP6K1Q92551 441 aa9.81□□□□□ -0.84
SYCP3-204ENST00000478139 CHMP4AQ9BY43 222 aa9.81□□□□□ -0.84
SYCP3-204ENST00000478139 SOS2Q07890 1332 aaPredicted RBP9.81□□□□□ -0.84
SYCP3-204ENST00000478139 MAP3K19Q56UN5 1328 aa9.81□□□□□ -0.84
SYCP3-204ENST00000478139 CABP4P57796 275 aa9.8□□□□□ -0.84
SYCP3-204ENST00000478139 RBM42Q9BTD8 480 aaKnown RBP9.8□□□□□ -0.84
SYCP3-204ENST00000478139 TECPR2O15040 1411 aa9.8□□□□□ -0.84
SYCP3-204ENST00000478139 SBNO1A3KN83 1393 aa9.8□□□□□ -0.84
SYCP3-204ENST00000478139 LAMC1P11047 1609 aa9.8□□□□□ -0.84
SYCP3-204ENST00000478139 DCAF8L1A6NGE4 600 aa9.8□□□□□ -0.84
SYCP3-204ENST00000478139 PPP2R1AP30153 589 aa9.8□□□□□ -0.84
SYCP3-204ENST00000478139 CCDC146Q8IYE0 955 aa9.8□□□□□ -0.84
SYCP3-204ENST00000478139 TNS3Q68CZ2 1445 aa9.8□□□□□ -0.84
SYCP3-204ENST00000478139 BACH2Q9BYV9 841 aa9.8□□□□□ -0.84
SYCP3-204ENST00000478139 PARD3Q8TEW0 1356 aa9.8□□□□□ -0.84
SYCP3-204ENST00000478139 ZCRB1Q8TBF4 217 aaKnown RBP9.79□□□□□ -0.84
SYCP3-204ENST00000478139 MST1RQ04912 1400 aa9.79□□□□□ -0.84
SYCP3-204ENST00000478139 PRKAR2BP31323 418 aa9.79□□□□□ -0.84
SYCP3-204ENST00000478139 AMOTQ4VCS5 1084 aa9.79□□□□□ -0.84
SYCP3-204ENST00000478139 CRBNQ96SW2 442 aa9.79□□□□□ -0.84
SYCP3-204ENST00000478139 BCL11BQ9C0K0 894 aaPredicted RBP9.79□□□□□ -0.84
SYCP3-204ENST00000478139 USP6P35125 1406 aa9.78□□□□□ -0.84
SYCP3-204ENST00000478139 BAG6P46379 1132 aa9.78□□□□□ -0.84
SYCP3-204ENST00000478139 ANO8Q9HCE9 1232 aaPredicted RBP9.78□□□□□ -0.84
SYCP3-204ENST00000478139 FLT4P35916 1363 aa9.78□□□□□ -0.84
SYCP3-204ENST00000478139 LARP1Q6PKG0 1096 aaKnown RBP9.78□□□□□ -0.84
SYCP3-204ENST00000478139 NEURL4Q96JN8 1562 aa9.78□□□□□ -0.84
SYCP3-204ENST00000478139 PER1O15534 1290 aaPredicted RBP9.78□□□□□ -0.84
SYCP3-204ENST00000478139 HOXC9P31274 260 aa9.78□□□□□ -0.84
SYCP3-204ENST00000478139 RRP7AQ9Y3A4 280 aaKnown RBP9.78□□□□□ -0.84
SYCP3-204ENST00000478139 DLC1Q96QB1 1528 aa9.78□□□□□ -0.84
SYCP3-204ENST00000478139 TULP4Q9NRJ4 1543 aa9.78□□□□□ -0.84
SYCP3-204ENST00000478139 MPRIPQ6WCQ1 1025 aa9.77□□□□□ -0.84
SYCP3-204ENST00000478139 IL27Q8NEV9 243 aa9.77□□□□□ -0.84
SYCP3-204ENST00000478139 CARD14Q9BXL6 1004 aa9.77□□□□□ -0.84
SYCP3-204ENST00000478139 TMOD3Q9NYL9 352 aa9.77□□□□□ -0.84
SYCP3-204ENST00000478139 FAM83GA6ND36 823 aa9.77□□□□□ -0.85
SYCP3-204ENST00000478139 GTF2E1P29083 439 aaPredicted RBP9.77□□□□□ -0.85
SYCP3-204ENST00000478139 ARHGEF25Q86VW2 580 aa9.77□□□□□ -0.85
SYCP3-204ENST00000478139 SEPT12Q8IYM1 358 aa9.77□□□□□ -0.85
SYCP3-204ENST00000478139 ACSBG1Q96GR2 724 aa9.77□□□□□ -0.85
SYCP3-204ENST00000478139 ZNF142P52746 1687 aaPredicted RBP9.77□□□□□ -0.85
SYCP3-204ENST00000478139 TRPM1Q7Z4N2 1603 aa9.76□□□□□ -0.85
SYCP3-204ENST00000478139 MYO5BQ9ULV0 1848 aa9.76□□□□□ -0.85
SYCP3-204ENST00000478139 C20orf194Q5TEA3 1177 aa9.76□□□□□ -0.85
SYCP3-204ENST00000478139 NBPF14Q5TI25 921 aa9.76□□□□□ -0.85
SYCP3-204ENST00000478139 KRT27Q7Z3Y8 459 aa9.76□□□□□ -0.85
SYCP3-204ENST00000478139 IFNL2Q8IZJ0 200 aa9.76□□□□□ -0.85
SYCP3-204ENST00000478139 FBXO3Q9UK99 471 aa9.76□□□□□ -0.85
SYCP3-204ENST00000478139 RIPK4P57078 832 aa9.76□□□□□ -0.85
SYCP3-204ENST00000478139 GJD4Q96KN9 370 aaPredicted RBP9.76□□□□□ -0.85
SYCP3-204ENST00000478139 PDIA4P13667 645 aaKnown RBP9.76□□□□□ -0.85
SYCP3-204ENST00000478139 POLKQ9UBT6 870 aa9.76□□□□□ -0.85
SYCP3-204ENST00000478139 MS4A1P11836 297 aa9.75□□□□□ -0.85
SYCP3-204ENST00000478139 PPLO60437 1756 aa9.74□□□□□ -0.85
SYCP3-204ENST00000478139 ATP7BP35670 1465 aa9.74□□□□□ -0.85
SYCP3-204ENST00000478139 NRXN1Q9ULB1 1477 aa9.74□□□□□ -0.85
SYCP3-204ENST00000478139 STK31Q9BXU1 1019 aa9.74□□□□□ -0.85
SYCP3-204ENST00000478139 PNPLA6Q8IY17 1366 aa9.74□□□□□ -0.85
SYCP3-204ENST00000478139 SLC4A3P48751 1232 aa9.74□□□□□ -0.85
SYCP3-204ENST00000478139 RUNDC1Q96C34 613 aa9.74□□□□□ -0.85
SYCP3-204ENST00000478139 ASXL1Q8IXJ9 1541 aa9.73□□□□□ -0.85
SYCP3-204ENST00000478139 APBA3O96018 575 aa9.73□□□□□ -0.85
SYCP3-204ENST00000478139 FAM196AQ6ZSG2 479 aa9.73□□□□□ -0.85
SYCP3-204ENST00000478139 CARD10Q9BWT7 1032 aa9.73□□□□□ -0.85
SYCP3-204ENST00000478139 PPP1R1BQ9UD71 204 aaPredicted RBP9.73□□□□□ -0.85
SYCP3-204ENST00000478139 KDM5AP29375 1690 aaKnown RBP9.73□□□□□ -0.85
SYCP3-204ENST00000478139 BLMP54132 1417 aaPredicted RBP9.73□□□□□ -0.85
SYCP3-204ENST00000478139 APAF1O14727 1248 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms