RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 VEGFBP49765 207 aa7.16□□□□□ -1.26
SF3B6-202ENST00000478050 EHBP1Q8NDI1 1231 aa7.16□□□□□ -1.26
SF3B6-202ENST00000478050 PHLDB1Q86UU1 1377 aa7.16□□□□□ -1.26
SF3B6-202ENST00000478050 RAB3GAP2Q9H2M9 1393 aa7.16□□□□□ -1.26
SF3B6-202ENST00000478050 PTPRMP28827 1452 aa7.16□□□□□ -1.26
SF3B6-202ENST00000478050 TESPA1A2RU30 521 aaPredicted RBP7.15□□□□□ -1.26
SF3B6-202ENST00000478050 NEUROD1Q13562 356 aa7.15□□□□□ -1.26
SF3B6-202ENST00000478050 PRG4Q92954 1404 aaPredicted RBP7.15□□□□□ -1.27
SF3B6-202ENST00000478050 TEX14Q8IWB6 1497 aa7.15□□□□□ -1.27
SF3B6-202ENST00000478050 EHBP1L1Q8N3D4 1523 aa7.15□□□□□ -1.27
SF3B6-202ENST00000478050 ADAMTS12P58397 1594 aa7.15□□□□□ -1.27
SF3B6-202ENST00000478050 H3BM21 787 aa7.14□□□□□ -1.27
SF3B6-202ENST00000478050 HSPA2P54652 639 aa7.14□□□□□ -1.27
SF3B6-202ENST00000478050 USP46P62068 366 aa7.14□□□□□ -1.27
SF3B6-202ENST00000478050 SHROOM2Q13796 1616 aa7.14□□□□□ -1.27
SF3B6-202ENST00000478050 TRIM46Q7Z4K8 759 aa7.14□□□□□ -1.27
SF3B6-202ENST00000478050 COL17A1Q9UMD9 1497 aaPredicted RBP7.14□□□□□ -1.27
SF3B6-202ENST00000478050 HECW1Q76N89 1606 aa7.13□□□□□ -1.27
SF3B6-202ENST00000478050 GRIN2AQ12879 1464 aa7.13□□□□□ -1.27
SF3B6-202ENST00000478050 CCDC18Q5T9S5 1454 aa7.13□□□□□ -1.27
SF3B6-202ENST00000478050 CD46P15529 392 aa7.13□□□□□ -1.27
SF3B6-202ENST00000478050 IQGAP2Q13576 1575 aa7.12□□□□□ -1.27
SF3B6-202ENST00000478050 NUP160Q12769 1436 aa7.12□□□□□ -1.27
SF3B6-202ENST00000478050 FGD6Q6ZV73 1430 aa7.12□□□□□ -1.27
SF3B6-202ENST00000478050 GPR37O15354 613 aa7.12□□□□□ -1.27
SF3B6-202ENST00000478050 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
SF3B6-202ENST00000478050 MTUS2Q5JR59 1369 aa7.11□□□□□ -1.27
SF3B6-202ENST00000478050 ERBB4Q15303 1308 aa7.11□□□□□ -1.27
SF3B6-202ENST00000478050 JUNDP17535 347 aa7.11□□□□□ -1.27
SF3B6-202ENST00000478050 ITGAEP38570 1179 aa7.11□□□□□ -1.27
SF3B6-202ENST00000478050 FAM50AQ14320 339 aaKnown RBP7.11□□□□□ -1.27
SF3B6-202ENST00000478050 ADCY10Q96PN6 1610 aa7.11□□□□□ -1.27
SF3B6-202ENST00000478050 PPRC1Q5VV67 1664 aaKnown RBP7.1□□□□□ -1.27
SF3B6-202ENST00000478050 GCC2Q8IWJ2 1684 aa7.1□□□□□ -1.27
SF3B6-202ENST00000478050 PTPN23Q9H3S7 1636 aa7.1□□□□□ -1.27
SF3B6-202ENST00000478050 SIAH2O43255 324 aa7.1□□□□□ -1.27
SF3B6-202ENST00000478050 HLA-CQ95604 372 aa7.1□□□□□ -1.27
SF3B6-202ENST00000478050 ZFP42Q96MM3 310 aa7.1□□□□□ -1.27
SF3B6-202ENST00000478050 ATP1B4Q9UN42 357 aaPredicted RBP7.1□□□□□ -1.27
SF3B6-202ENST00000478050 UGGT2Q9NYU1 1516 aa7.1□□□□□ -1.27
SF3B6-202ENST00000478050 NCOA2Q15596 1464 aa7.1□□□□□ -1.27
SF3B6-202ENST00000478050 GLI2P10070 1586 aa7.09□□□□□ -1.27
SF3B6-202ENST00000478050 SCARF1Q14162 830 aa7.09□□□□□ -1.27
SF3B6-202ENST00000478050 GPIHBP1Q8IV16 184 aa7.09□□□□□ -1.27
SF3B6-202ENST00000478050 NUDT12Q9BQG2 462 aa7.09□□□□□ -1.27
SF3B6-202ENST00000478050 TIMELESSQ9UNS1 1208 aa7.09□□□□□ -1.27
SF3B6-202ENST00000478050 PLB1Q6P1J6 1458 aa7.09□□□□□ -1.27
SF3B6-202ENST00000478050 MYOM3Q5VTT5 1437 aa7.09□□□□□ -1.28
SF3B6-202ENST00000478050 HOXA2O43364 376 aa7.08□□□□□ -1.28
SF3B6-202ENST00000478050 GTF3C3Q9Y5Q9 886 aa7.08□□□□□ -1.28
SF3B6-202ENST00000478050 TCOF1Q13428 1488 aaKnown RBP7.07□□□□□ -1.28
SF3B6-202ENST00000478050 PTCRAQ6ISU1 281 aaPredicted RBP7.07□□□□□ -1.28
SF3B6-202ENST00000478050 SYMPKQ92797 1274 aaKnown RBP7.07□□□□□ -1.28
SF3B6-202ENST00000478050 HFM1A2PYH4 1435 aa7.07□□□□□ -1.28
SF3B6-202ENST00000478050 MED1Q15648 1581 aaPredicted RBP7.07□□□□□ -1.28
SF3B6-202ENST00000478050 TULP1O00294 542 aaPredicted RBP7.06□□□□□ -1.28
SF3B6-202ENST00000478050 MDM2Q00987 491 aaPredicted RBP7.06□□□□□ -1.28
SF3B6-202ENST00000478050 GUCA2AQ02747 115 aa7.06□□□□□ -1.28
SF3B6-202ENST00000478050 MAGI3Q5TCQ9 1506 aa7.06□□□□□ -1.28
SF3B6-202ENST00000478050 KIAA0556O60303 1618 aa7.05□□□□□ -1.28
SF3B6-202ENST00000478050 IQSEC2Q5JU85 1478 aa7.05□□□□□ -1.28
SF3B6-202ENST00000478050 AKNAQ7Z591 1439 aa7.05□□□□□ -1.28
SF3B6-202ENST00000478050 UACAQ9BZF9 1416 aa7.05□□□□□ -1.28
SF3B6-202ENST00000478050 PLEKHG3A1L390 1219 aa7.05□□□□□ -1.28
SF3B6-202ENST00000478050 SH3BP2P78314 561 aa7.05□□□□□ -1.28
SF3B6-202ENST00000478050 RETREG3Q86VR2 466 aa7.05□□□□□ -1.28
SF3B6-202ENST00000478050 NUTM1Q86Y26 1132 aa7.05□□□□□ -1.28
SF3B6-202ENST00000478050 EPRSP07814 1512 aaKnown RBP7.05□□□□□ -1.28
SF3B6-202ENST00000478050 ASXL2Q76L83 1435 aa7.04□□□□□ -1.28
SF3B6-202ENST00000478050 ADAMTSL3P82987 1691 aa7.04□□□□□ -1.28
SF3B6-202ENST00000478050 MS4A1P11836 297 aa7.04□□□□□ -1.28
SF3B6-202ENST00000478050 MRPL14Q6P1L8 145 aaKnown RBP7.04□□□□□ -1.28
SF3B6-202ENST00000478050 YTHDC1Q96MU7 727 aaKnown RBP7.04□□□□□ -1.28
SF3B6-202ENST00000478050 RAPGEF6Q8TEU7 1601 aa7.04□□□□□ -1.28
SF3B6-202ENST00000478050 ARID4BQ4LE39 1312 aaPredicted RBP7.03□□□□□ -1.28
SF3B6-202ENST00000478050 NAIPQ13075 1403 aa7.03□□□□□ -1.28
SF3B6-202ENST00000478050 MIA2Q96PC5 1412 aa7.03□□□□□ -1.28
SF3B6-202ENST00000478050 KIAA0586Q9BVV6 1533 aa7.03□□□□□ -1.28
SF3B6-202ENST00000478050 UBAP1LF5GYI3 381 aa7.03□□□□□ -1.28
SF3B6-202ENST00000478050 CCNYL3P0C7X3 344 aa7.03□□□□□ -1.28
SF3B6-202ENST00000478050 LINC01559Q495D7 138 aa7.03□□□□□ -1.28
SF3B6-202ENST00000478050 PURBQ96QR8 312 aaKnown RBP7.03□□□□□ -1.28
SF3B6-202ENST00000478050 PTPRKQ15262 1439 aa7.02□□□□□ -1.29
SF3B6-202ENST00000478050 C6orf229H3BNL8 230 aa7.02□□□□□ -1.29
SF3B6-202ENST00000478050 MAP2K5Q13163 448 aa7.02□□□□□ -1.29
SF3B6-202ENST00000478050 NNTQ13423 1086 aa7.02□□□□□ -1.29
SF3B6-202ENST00000478050 KCTD17Q8N5Z5 321 aa7.02□□□□□ -1.29
SF3B6-202ENST00000478050 TLL2Q9Y6L7 1015 aa7.02□□□□□ -1.29
SF3B6-202ENST00000478050 ITSN2Q9NZM3 1697 aa7.02□□□□□ -1.29
SF3B6-202ENST00000478050 YEATS2Q9ULM3 1422 aa7.01□□□□□ -1.29
SF3B6-202ENST00000478050 CDK13Q14004 1512 aaKnown RBP7.01□□□□□ -1.29
SF3B6-202ENST00000478050 SOBPA7XYQ1 873 aa7.01□□□□□ -1.29
SF3B6-202ENST00000478050 VARSP26640 1264 aaKnown RBP7.01□□□□□ -1.29
SF3B6-202ENST00000478050 WDR4P57081 412 aaKnown RBP7.01□□□□□ -1.29
SF3B6-202ENST00000478050 KCNMA1Q12791 1236 aa7.01□□□□□ -1.29
SF3B6-202ENST00000478050 BAP1Q92560 729 aa7.01□□□□□ -1.29
SF3B6-202ENST00000478050 DNMT1P26358 1616 aaKnown RBP7.01□□□□□ -1.29
SF3B6-202ENST00000478050 ADGBQ8N7X0 1667 aa7□□□□□ -1.29
SF3B6-202ENST00000478050 MAN1A2O60476 641 aa7□□□□□ -1.29
SF3B6-202ENST00000478050 ADH1CP00326 375 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms