RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 TOPAZ1Q8N9V7 1692 aa10.56□□□□□ -0.72
PTPRD-209ENST00000477552 SOS1Q07889 1333 aaPredicted RBP10.56□□□□□ -0.72
PTPRD-209ENST00000477552 TTC21BQ7Z4L5 1316 aa10.56□□□□□ -0.72
PTPRD-209ENST00000477552 TTC21AQ8NDW8 1320 aa10.56□□□□□ -0.72
PTPRD-209ENST00000477552 PLEKHG3A1L390 1219 aa10.55□□□□□ -0.72
PTPRD-209ENST00000477552 PTMSP20962 102 aa10.55□□□□□ -0.72
PTPRD-209ENST00000477552 NUDT16Q96DE0 195 aaKnown RBP10.55□□□□□ -0.72
PTPRD-209ENST00000477552 NALCNQ8IZF0 1738 aa10.55□□□□□ -0.72
PTPRD-209ENST00000477552 CACNA1FO60840 1977 aa10.54□□□□□ -0.72
PTPRD-209ENST00000477552 ZNF853P0CG23 659 aa10.54□□□□□ -0.72
PTPRD-209ENST00000477552 RLBP1P12271 317 aa10.54□□□□□ -0.72
PTPRD-209ENST00000477552 PRKAR2BP31323 418 aa10.54□□□□□ -0.72
PTPRD-209ENST00000477552 IL13P35225 146 aa10.54□□□□□ -0.72
PTPRD-209ENST00000477552 ITPRIPQ8IWB1 547 aa10.54□□□□□ -0.72
PTPRD-209ENST00000477552 BCL11AQ9H165 835 aa10.54□□□□□ -0.72
PTPRD-209ENST00000477552 EID1Q9Y6B2 187 aa10.54□□□□□ -0.72
PTPRD-209ENST00000477552 DLG5Q8TDM6 1919 aa10.54□□□□□ -0.72
PTPRD-209ENST00000477552 KIAA0232Q92628 1395 aa10.53□□□□□ -0.72
PTPRD-209ENST00000477552 GSE1Q14687 1217 aa10.53□□□□□ -0.72
PTPRD-209ENST00000477552 NFKBIBQ15653 356 aa10.53□□□□□ -0.72
PTPRD-209ENST00000477552 NOB1Q9ULX3 412 aaKnown RBP10.53□□□□□ -0.72
PTPRD-209ENST00000477552 NUCB1Q02818 461 aa10.52□□□□□ -0.73
PTPRD-209ENST00000477552 SLIT1O75093 1534 aa10.52□□□□□ -0.73
PTPRD-209ENST00000477552 BMP2KLQ5H9B9 411 aa10.51□□□□□ -0.73
PTPRD-209ENST00000477552 TSR2Q969E8 191 aaKnown RBP10.51□□□□□ -0.73
PTPRD-209ENST00000477552 LAS1LQ9Y4W2 734 aaKnown RBP10.51□□□□□ -0.73
PTPRD-209ENST00000477552 ABCC4O15439 1325 aa10.51□□□□□ -0.73
PTPRD-209ENST00000477552 PTPRCP08575 1304 aa10.51□□□□□ -0.73
PTPRD-209ENST00000477552 METP08581 1390 aa10.51□□□□□ -0.73
PTPRD-209ENST00000477552 USP31Q70CQ4 1352 aa10.51□□□□□ -0.73
PTPRD-209ENST00000477552 HTATSF1O43719 755 aaKnown RBP10.5□□□□□ -0.73
PTPRD-209ENST00000477552 VAMP4O75379 141 aa10.5□□□□□ -0.73
PTPRD-209ENST00000477552 WAPLQ7Z5K2 1190 aa10.5□□□□□ -0.73
PTPRD-209ENST00000477552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.5□□□□□ -0.73
PTPRD-209ENST00000477552 BABAM1Q9NWV8 329 aa10.5□□□□□ -0.73
PTPRD-209ENST00000477552 TBX22Q9Y458 520 aa10.5□□□□□ -0.73
PTPRD-209ENST00000477552 USP19O94966 1318 aa10.5□□□□□ -0.73
PTPRD-209ENST00000477552 USP54Q70EL1 1684 aa10.5□□□□□ -0.73
PTPRD-209ENST00000477552 ARHGEF10O15013 1369 aa10.5□□□□□ -0.73
PTPRD-209ENST00000477552 ANKARQ7Z5J8 1434 aa10.5□□□□□ -0.73
PTPRD-209ENST00000477552 TWISTNBQ3B726 338 aaPredicted RBP10.49□□□□□ -0.73
PTPRD-209ENST00000477552 TMEM57Q8N5G2 664 aa10.49□□□□□ -0.73
PTPRD-209ENST00000477552 MRPL50Q8N5N7 158 aaKnown RBP10.49□□□□□ -0.73
PTPRD-209ENST00000477552 BCL2L13Q9BXK5 485 aa10.49□□□□□ -0.73
PTPRD-209ENST00000477552 C22orf23Q9BZE7 217 aa10.49□□□□□ -0.73
PTPRD-209ENST00000477552 ISY1Q9ULR0 285 aaKnown RBP10.49□□□□□ -0.73
PTPRD-209ENST00000477552 CIZ1Q9ULV3 898 aaPredicted RBP10.49□□□□□ -0.73
PTPRD-209ENST00000477552 OVOS2A0A0J9YW53 1432 aa10.49□□□□□ -0.73
PTPRD-209ENST00000477552 USP6P35125 1406 aa10.49□□□□□ -0.73
PTPRD-209ENST00000477552 OVOS2Q6IE36 1432 aa10.49□□□□□ -0.73
PTPRD-209ENST00000477552 ARHGAP23Q9P227 1491 aa10.49□□□□□ -0.73
PTPRD-209ENST00000477552 RGPD1P0DJD0 1748 aa10.48□□□□□ -0.73
PTPRD-209ENST00000477552 FMN2Q9NZ56 1722 aa10.48□□□□□ -0.73
PTPRD-209ENST00000477552 ZBTB7BO15156 539 aaPredicted RBP10.48□□□□□ -0.73
PTPRD-209ENST00000477552 RBM25P49756 843 aaKnown RBP10.48□□□□□ -0.73
PTPRD-209ENST00000477552 L1TD1Q5T7N2 865 aaKnown RBP10.48□□□□□ -0.73
PTPRD-209ENST00000477552 CHD1LQ86WJ1 897 aa10.48□□□□□ -0.73
PTPRD-209ENST00000477552 RPAP2Q8IXW5 612 aaPredicted RBP10.48□□□□□ -0.73
PTPRD-209ENST00000477552 SNX21Q969T3 373 aa10.48□□□□□ -0.73
PTPRD-209ENST00000477552 RTL1A6NKG5 1358 aa10.48□□□□□ -0.73
PTPRD-209ENST00000477552 ADAMTS13Q76LX8 1427 aa10.48□□□□□ -0.73
PTPRD-209ENST00000477552 INTS3Q68E01 1043 aaKnown RBP10.47□□□□□ -0.73
PTPRD-209ENST00000477552 HSCBQ8IWL3 235 aa10.47□□□□□ -0.73
PTPRD-209ENST00000477552 THEMISQ8N1K5 641 aaPredicted RBP10.47□□□□□ -0.73
PTPRD-209ENST00000477552 CHMP5Q9NZZ3 219 aa10.47□□□□□ -0.73
PTPRD-209ENST00000477552 PTPRUQ92729 1446 aa10.47□□□□□ -0.73
PTPRD-209ENST00000477552 CASC1Q6TDU7 716 aa10.46□□□□□ -0.73
PTPRD-209ENST00000477552 TXNDC2Q86VQ3 553 aa10.46□□□□□ -0.73
PTPRD-209ENST00000477552 GAS2L2Q8NHY3 880 aa10.46□□□□□ -0.73
PTPRD-209ENST00000477552 MBIPQ9NS73 344 aa10.46□□□□□ -0.73
PTPRD-209ENST00000477552 SBNO1A3KN83 1393 aa10.46□□□□□ -0.74
PTPRD-209ENST00000477552 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.45□□□□□ -0.74
PTPRD-209ENST00000477552 FLT4P35916 1363 aa10.45□□□□□ -0.74
PTPRD-209ENST00000477552 HMMRO75330 724 aa10.45□□□□□ -0.74
PTPRD-209ENST00000477552 NME9Q86XW9 330 aa10.45□□□□□ -0.74
PTPRD-209ENST00000477552 SSH2Q76I76 1423 aa10.44□□□□□ -0.74
PTPRD-209ENST00000477552 CHL1O00533 1208 aa10.44□□□□□ -0.74
PTPRD-209ENST00000477552 EMILIN1Q9Y6C2 1016 aa10.44□□□□□ -0.74
PTPRD-209ENST00000477552 KDRP35968 1356 aa10.43□□□□□ -0.74
PTPRD-209ENST00000477552 ROBO2Q9HCK4 1378 aa10.43□□□□□ -0.74
PTPRD-209ENST00000477552 ACEP12821 1306 aa10.43□□□□□ -0.74
PTPRD-209ENST00000477552 DDX11L8A8MPP1 907 aa10.43□□□□□ -0.74
PTPRD-209ENST00000477552 MLECQ14165 292 aa10.43□□□□□ -0.74
PTPRD-209ENST00000477552 SKAP1Q86WV1 359 aa10.43□□□□□ -0.74
PTPRD-209ENST00000477552 RTF1Q92541 710 aaKnown RBP10.43□□□□□ -0.74
PTPRD-209ENST00000477552 PHACTR3Q96KR7 559 aa10.43□□□□□ -0.74
PTPRD-209ENST00000477552 ANTXR1Q9H6X2 564 aa10.43□□□□□ -0.74
PTPRD-209ENST00000477552 FER1L4A9Z1Z3 1794 aa10.43□□□□□ -0.74
PTPRD-209ENST00000477552 XRN1Q8IZH2 1706 aaKnown RBP10.42□□□□□ -0.74
PTPRD-209ENST00000477552 HMOX1P09601 288 aa10.42□□□□□ -0.74
PTPRD-209ENST00000477552 CCT4P50991 539 aaKnown RBP10.42□□□□□ -0.74
PTPRD-209ENST00000477552 SKOR2Q2VWA4 1001 aaPredicted RBP10.42□□□□□ -0.74
PTPRD-209ENST00000477552 TBC1D2Q9BYX2 928 aa10.42□□□□□ -0.74
PTPRD-209ENST00000477552 DCTPP1Q9H773 170 aa10.42□□□□□ -0.74
PTPRD-209ENST00000477552 CDC45O75419 566 aa10.41□□□□□ -0.74
PTPRD-209ENST00000477552 EIF4A2Q14240 407 aaKnown RBP10.41□□□□□ -0.74
PTPRD-209ENST00000477552 ANKRD45Q5TZF3 282 aa10.41□□□□□ -0.74
PTPRD-209ENST00000477552 N4BP2Q86UW6 1770 aaPredicted RBP10.41□□□□□ -0.74
PTPRD-209ENST00000477552 PRR36Q9H6K5 1346 aa10.4□□□□□ -0.74
PTPRD-209ENST00000477552 EPB41L2O43491 1005 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms