RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 KIF24Q5T7B8 1368 aa16.9■□□□□ 0.3
HLA-DMA-208ENST00000477541 FCHSD2O94868 740 aa16.9■□□□□ 0.3
HLA-DMA-208ENST00000477541 GLIPR1L2Q4G1C9 344 aa16.89■□□□□ 0.29
HLA-DMA-208ENST00000477541 CFAP65Q6ZU64 1925 aaKnown RBP16.88■□□□□ 0.29
HLA-DMA-208ENST00000477541 FAM135BQ49AJ0 1406 aa16.88■□□□□ 0.29
HLA-DMA-208ENST00000477541 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
HLA-DMA-208ENST00000477541 TMEM132EQ6IEE7 984 aa16.88■□□□□ 0.29
HLA-DMA-208ENST00000477541 LRRC7Q96NW7 1537 aa16.88■□□□□ 0.29
HLA-DMA-208ENST00000477541 DIAPH1O60610 1272 aaKnown RBP16.87■□□□□ 0.29
HLA-DMA-208ENST00000477541 RIPK4P57078 832 aa16.87■□□□□ 0.29
HLA-DMA-208ENST00000477541 CD163L1Q9NR16 1453 aa16.87■□□□□ 0.29
HLA-DMA-208ENST00000477541 AGLP35573 1532 aa16.87■□□□□ 0.29
HLA-DMA-208ENST00000477541 GOLGA6L22H0YM25 854 aa16.87■□□□□ 0.29
HLA-DMA-208ENST00000477541 U2SURPO15042 1029 aaKnown RBP16.87■□□□□ 0.29
HLA-DMA-208ENST00000477541 TNPO1Q92973 898 aaKnown RBP16.87■□□□□ 0.29
HLA-DMA-208ENST00000477541 ZNF335Q9H4Z2 1342 aaPredicted RBP16.86■□□□□ 0.29
HLA-DMA-208ENST00000477541 DIP2CQ9Y2E4 1556 aa16.86■□□□□ 0.29
HLA-DMA-208ENST00000477541 ESPNB1AK53 854 aa16.85■□□□□ 0.29
HLA-DMA-208ENST00000477541 K7ELQ4 463 aaPredicted RBP16.85■□□□□ 0.29
HLA-DMA-208ENST00000477541 SLC52A1Q9NWF4 448 aa16.85■□□□□ 0.29
HLA-DMA-208ENST00000477541 HDGFL2Q7Z4V5 671 aaPredicted RBP16.84■□□□□ 0.29
HLA-DMA-208ENST00000477541 SPRYD3Q8NCJ5 442 aa16.84■□□□□ 0.29
HLA-DMA-208ENST00000477541 PANK2Q9BZ23 570 aa16.84■□□□□ 0.29
HLA-DMA-208ENST00000477541 GZF1Q9H116 711 aaPredicted RBP16.84■□□□□ 0.29
HLA-DMA-208ENST00000477541 ATP7BP35670 1465 aa16.84■□□□□ 0.29
HLA-DMA-208ENST00000477541 RRP9O43818 475 aaKnown RBP16.84■□□□□ 0.29
HLA-DMA-208ENST00000477541 TRIM44Q96DX7 344 aaPredicted RBP16.84■□□□□ 0.29
HLA-DMA-208ENST00000477541 CABP2Q9NPB3 220 aa16.84■□□□□ 0.29
HLA-DMA-208ENST00000477541 DLC1Q96QB1 1528 aa16.83■□□□□ 0.29
HLA-DMA-208ENST00000477541 FYB1O15117 783 aa16.83■□□□□ 0.28
HLA-DMA-208ENST00000477541 TMEM131LA2VDJ0 1609 aa16.82■□□□□ 0.28
HLA-DMA-208ENST00000477541 CCDC173Q0VFZ6 552 aa16.82■□□□□ 0.28
HLA-DMA-208ENST00000477541 NAP1L5Q96NT1 182 aaPredicted RBP16.82■□□□□ 0.28
HLA-DMA-208ENST00000477541 ABCC4O15439 1325 aa16.82■□□□□ 0.28
HLA-DMA-208ENST00000477541 ZBTB7BO15156 539 aaPredicted RBP16.82■□□□□ 0.28
HLA-DMA-208ENST00000477541 HSPA1LP34931 641 aa16.82■□□□□ 0.28
HLA-DMA-208ENST00000477541 KIF2CQ99661 725 aa16.82■□□□□ 0.28
HLA-DMA-208ENST00000477541 ESF1Q9H501 851 aaKnown RBP16.82■□□□□ 0.28
HLA-DMA-208ENST00000477541 CDC45O75419 566 aa16.81■□□□□ 0.28
HLA-DMA-208ENST00000477541 HSP90AA1P07900 732 aaKnown RBP16.81■□□□□ 0.28
HLA-DMA-208ENST00000477541 GNAI1P63096 354 aa16.81■□□□□ 0.28
HLA-DMA-208ENST00000477541 SRPK2P78362 688 aaKnown RBP16.81■□□□□ 0.28
HLA-DMA-208ENST00000477541 LNPKQ9C0E8 428 aa16.81■□□□□ 0.28
HLA-DMA-208ENST00000477541 IFT57Q9NWB7 429 aa16.81■□□□□ 0.28
HLA-DMA-208ENST00000477541 YTHDC2Q9H6S0 1430 aaKnown RBP16.8■□□□□ 0.28
HLA-DMA-208ENST00000477541 TPM2P07951 284 aa16.8■□□□□ 0.28
HLA-DMA-208ENST00000477541 LMOD3Q0VAK6 560 aa16.8■□□□□ 0.28
HLA-DMA-208ENST00000477541 PPP1R9BQ96SB3 815 aa16.8■□□□□ 0.28
HLA-DMA-208ENST00000477541 RABEP1Q15276 862 aa16.79■□□□□ 0.28
HLA-DMA-208ENST00000477541 KLHL40Q2TBA0 621 aa16.79■□□□□ 0.28
HLA-DMA-208ENST00000477541 MRPL50Q8N5N7 158 aaKnown RBP16.79■□□□□ 0.28
HLA-DMA-208ENST00000477541 ANP32BQ92688 251 aaKnown RBP16.79■□□□□ 0.28
HLA-DMA-208ENST00000477541 API5Q9BZZ5 524 aaKnown RBP16.79■□□□□ 0.28
HLA-DMA-208ENST00000477541 GGNBP2Q9H3C7 697 aa16.79■□□□□ 0.28
HLA-DMA-208ENST00000477541 HAP1P54257 671 aaPredicted RBP16.79■□□□□ 0.28
HLA-DMA-208ENST00000477541 NFE2L2Q16236 605 aa16.79■□□□□ 0.28
HLA-DMA-208ENST00000477541 GGT6Q6P531 493 aa16.79■□□□□ 0.28
HLA-DMA-208ENST00000477541 NCKAP5LQ9HCH0 1330 aa16.79■□□□□ 0.28
HLA-DMA-208ENST00000477541 CDK12Q9NYV4 1490 aaPredicted RBP16.78■□□□□ 0.28
HLA-DMA-208ENST00000477541 MYO5BQ9ULV0 1848 aa16.78■□□□□ 0.28
HLA-DMA-208ENST00000477541 NUCB2P80303 420 aa16.78■□□□□ 0.28
HLA-DMA-208ENST00000477541 HS1BP3Q53T59 392 aa16.78■□□□□ 0.28
HLA-DMA-208ENST00000477541 TBC1D9Q6ZT07 1266 aa16.78■□□□□ 0.28
HLA-DMA-208ENST00000477541 ANKRD45Q5TZF3 282 aa16.77■□□□□ 0.28
HLA-DMA-208ENST00000477541 VAMP4O75379 141 aa16.76■□□□□ 0.27
HLA-DMA-208ENST00000477541 TERF1P54274 439 aa16.76■□□□□ 0.27
HLA-DMA-208ENST00000477541 CPSF1Q10570 1443 aaKnown RBP16.76■□□□□ 0.27
HLA-DMA-208ENST00000477541 ZNF853P0CG23 659 aa16.76■□□□□ 0.27
HLA-DMA-208ENST00000477541 CWC22Q9HCG8 908 aaKnown RBP16.76■□□□□ 0.27
HLA-DMA-208ENST00000477541 MAP2P11137 1827 aaKnown RBP16.75■□□□□ 0.27
HLA-DMA-208ENST00000477541 ALKQ9UM73 1620 aa16.75■□□□□ 0.27
HLA-DMA-208ENST00000477541 AATKQ6ZMQ8 1374 aa16.74■□□□□ 0.27
HLA-DMA-208ENST00000477541 ZNF142P52746 1687 aaPredicted RBP16.74■□□□□ 0.27
HLA-DMA-208ENST00000477541 ZNF445P59923 1031 aa16.74■□□□□ 0.27
HLA-DMA-208ENST00000477541 TOM1O60784 492 aa16.73■□□□□ 0.27
HLA-DMA-208ENST00000477541 PRKAR2BP31323 418 aa16.73■□□□□ 0.27
HLA-DMA-208ENST00000477541 HSP90AA2PQ14568 343 aaPredicted RBP16.73■□□□□ 0.27
HLA-DMA-208ENST00000477541 ARXQ96QS3 562 aa16.73■□□□□ 0.27
HLA-DMA-208ENST00000477541 DLG5Q8TDM6 1919 aa16.72■□□□□ 0.27
HLA-DMA-208ENST00000477541 GAS2L3Q86XJ1 694 aa16.72■□□□□ 0.27
HLA-DMA-208ENST00000477541 BAG4O95429 457 aaKnown RBP16.71■□□□□ 0.27
HLA-DMA-208ENST00000477541 NASPP49321 788 aaPredicted RBP16.71■□□□□ 0.27
HLA-DMA-208ENST00000477541 IDI1Q13907 227 aa16.71■□□□□ 0.27
HLA-DMA-208ENST00000477541 EDC4Q6P2E9 1401 aaKnown RBP16.71■□□□□ 0.27
HLA-DMA-208ENST00000477541 CASC1Q6TDU7 716 aa16.71■□□□□ 0.27
HLA-DMA-208ENST00000477541 ZSCAN30Q86W11 494 aa16.71■□□□□ 0.27
HLA-DMA-208ENST00000477541 DCTPP1Q9H773 170 aa16.71■□□□□ 0.27
HLA-DMA-208ENST00000477541 CPS1P31327 1500 aa16.71■□□□□ 0.27
HLA-DMA-208ENST00000477541 INTS3Q68E01 1043 aaKnown RBP16.7■□□□□ 0.26
HLA-DMA-208ENST00000477541 PRAM1Q96QH2 718 aa16.7■□□□□ 0.26
HLA-DMA-208ENST00000477541 PPP6R1Q9UPN7 881 aa16.7■□□□□ 0.26
HLA-DMA-208ENST00000477541 CYP2E1P05181 493 aaPredicted RBP16.7■□□□□ 0.26
HLA-DMA-208ENST00000477541 PIP4K2BP78356 416 aa16.7■□□□□ 0.26
HLA-DMA-208ENST00000477541 POLKQ9UBT6 870 aa16.7■□□□□ 0.26
HLA-DMA-208ENST00000477541 KNDC1Q76NI1 1749 aa16.7■□□□□ 0.26
HLA-DMA-208ENST00000477541 ERBB4Q15303 1308 aa16.69■□□□□ 0.26
HLA-DMA-208ENST00000477541 TTC22Q5TAA0 569 aa16.69■□□□□ 0.26
HLA-DMA-208ENST00000477541 SIRT2Q8IXJ6 389 aa16.69■□□□□ 0.26
HLA-DMA-208ENST00000477541 RPAP2Q8IXW5 612 aaPredicted RBP16.69■□□□□ 0.26
HLA-DMA-208ENST00000477541 GAS2L2Q8NHY3 880 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms