RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 FMN2Q9NZ56 1722 aa8.64□□□□□ -1.03
CCDC30-209ENST00000477155 IQSEC2Q5JU85 1478 aa8.63□□□□□ -1.03
CCDC30-209ENST00000477155 BCL2L13Q9BXK5 485 aa8.63□□□□□ -1.03
CCDC30-209ENST00000477155 USP31Q70CQ4 1352 aa8.63□□□□□ -1.03
CCDC30-209ENST00000477155 CDK12Q9NYV4 1490 aaPredicted RBP8.63□□□□□ -1.03
CCDC30-209ENST00000477155 CRBNQ96SW2 442 aa8.62□□□□□ -1.03
CCDC30-209ENST00000477155 NRKQ7Z2Y5 1582 aa8.62□□□□□ -1.03
CCDC30-209ENST00000477155 KRT28Q7Z3Y7 464 aa8.62□□□□□ -1.03
CCDC30-209ENST00000477155 MYH16Q9H6N6 1097 aa8.62□□□□□ -1.03
CCDC30-209ENST00000477155 DCTN1Q14203 1278 aa8.62□□□□□ -1.03
CCDC30-209ENST00000477155 NFE2L2Q16236 605 aa8.62□□□□□ -1.03
CCDC30-209ENST00000477155 FRAT1Q92837 279 aaPredicted RBP8.62□□□□□ -1.03
CCDC30-209ENST00000477155 FAM83GA6ND36 823 aa8.61□□□□□ -1.03
CCDC30-209ENST00000477155 LRRC7Q96NW7 1537 aa8.61□□□□□ -1.03
CCDC30-209ENST00000477155 EXOSC9Q06265 439 aaKnown RBP8.61□□□□□ -1.03
CCDC30-209ENST00000477155 ZNF335Q9H4Z2 1342 aaPredicted RBP8.61□□□□□ -1.03
CCDC30-209ENST00000477155 CANXP27824 592 aaKnown RBP8.6□□□□□ -1.03
CCDC30-209ENST00000477155 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.6□□□□□ -1.03
CCDC30-209ENST00000477155 EYA1Q99502 592 aa8.6□□□□□ -1.03
CCDC30-209ENST00000477155 HOXC9P31274 260 aa8.6□□□□□ -1.03
CCDC30-209ENST00000477155 FANCIQ9NVI1 1328 aa8.6□□□□□ -1.03
CCDC30-209ENST00000477155 FLT4P35916 1363 aa8.6□□□□□ -1.03
CCDC30-209ENST00000477155 PIK3C2AO00443 1686 aa8.6□□□□□ -1.03
CCDC30-209ENST00000477155 LMTK3Q96Q04 1460 aa8.6□□□□□ -1.03
CCDC30-209ENST00000477155 SBNO1A3KN83 1393 aa8.6□□□□□ -1.03
CCDC30-209ENST00000477155 RARSP54136 660 aaKnown RBP8.59□□□□□ -1.03
CCDC30-209ENST00000477155 C1orf167Q5SNV9 1468 aa8.59□□□□□ -1.03
CCDC30-209ENST00000477155 ELL2O00472 640 aaPredicted RBP8.59□□□□□ -1.03
CCDC30-209ENST00000477155 NCBP3Q53F19 620 aaKnown RBP8.59□□□□□ -1.03
CCDC30-209ENST00000477155 CADPS2Q86UW7 1296 aa8.59□□□□□ -1.03
CCDC30-209ENST00000477155 USHBP1Q8N6Y0 703 aa8.59□□□□□ -1.03
CCDC30-209ENST00000477155 GCP02774 474 aa8.59□□□□□ -1.03
CCDC30-209ENST00000477155 PEAK1Q9H792 1746 aa8.59□□□□□ -1.04
CCDC30-209ENST00000477155 NWD1Q149M9 1564 aa8.58□□□□□ -1.04
CCDC30-209ENST00000477155 ZC3H6P61129 1189 aaKnown RBP8.58□□□□□ -1.04
CCDC30-209ENST00000477155 MCM10Q7L590 875 aa8.58□□□□□ -1.04
CCDC30-209ENST00000477155 STRCP1A6NGW2 1772 aa8.58□□□□□ -1.04
CCDC30-209ENST00000477155 CLUAP1Q96AJ1 413 aa8.58□□□□□ -1.04
CCDC30-209ENST00000477155 MSH6P52701 1360 aa8.57□□□□□ -1.04
CCDC30-209ENST00000477155 KCNH5Q8NCM2 988 aa8.57□□□□□ -1.04
CCDC30-209ENST00000477155 CABLES1Q8TDN4 633 aa8.57□□□□□ -1.04
CCDC30-209ENST00000477155 PANK1Q8TE04 598 aa8.57□□□□□ -1.04
CCDC30-209ENST00000477155 TNNQ9UQP3 1299 aa8.57□□□□□ -1.04
CCDC30-209ENST00000477155 MTHFSDQ2M296 383 aaKnown RBP8.57□□□□□ -1.04
CCDC30-209ENST00000477155 IL16Q14005 1332 aa8.56□□□□□ -1.04
CCDC30-209ENST00000477155 IP6K1Q92551 441 aa8.56□□□□□ -1.04
CCDC30-209ENST00000477155 COG6Q9Y2V7 657 aa8.56□□□□□ -1.04
CCDC30-209ENST00000477155 TCERG1O14776 1098 aaKnown RBP8.56□□□□□ -1.04
CCDC30-209ENST00000477155 LRRC59Q96AG4 307 aaKnown RBP8.56□□□□□ -1.04
CCDC30-209ENST00000477155 TSHZ2Q9NRE2 1034 aa8.56□□□□□ -1.04
CCDC30-209ENST00000477155 SMC4Q9NTJ3 1288 aa8.56□□□□□ -1.04
CCDC30-209ENST00000477155 MST1RQ04912 1400 aa8.56□□□□□ -1.04
CCDC30-209ENST00000477155 LMOD3Q0VAK6 560 aa8.56□□□□□ -1.04
CCDC30-209ENST00000477155 MBIPQ9NS73 344 aa8.56□□□□□ -1.04
CCDC30-209ENST00000477155 MIS18AQ9NYP9 233 aa8.56□□□□□ -1.04
CCDC30-209ENST00000477155 NBPF6Q5VWK0 638 aa8.55□□□□□ -1.04
CCDC30-209ENST00000477155 SSH1Q8WYL5 1049 aa8.55□□□□□ -1.04
CCDC30-209ENST00000477155 NBPF4Q96M43 638 aa8.55□□□□□ -1.04
CCDC30-209ENST00000477155 IGSF1Q8N6C5 1336 aa8.55□□□□□ -1.04
CCDC30-209ENST00000477155 GNAI1P63096 354 aa8.55□□□□□ -1.04
CCDC30-209ENST00000477155 CALD1Q05682 793 aaKnown RBP8.55□□□□□ -1.04
CCDC30-209ENST00000477155 TSPYL6Q8N831 410 aa8.55□□□□□ -1.04
CCDC30-209ENST00000477155 STRCQ7RTU9 1775 aa8.55□□□□□ -1.04
CCDC30-209ENST00000477155 ARHGEF25Q86VW2 580 aa8.55□□□□□ -1.04
CCDC30-209ENST00000477155 RTF1Q92541 710 aaKnown RBP8.55□□□□□ -1.04
CCDC30-209ENST00000477155 SLAIN2Q9P270 581 aa8.55□□□□□ -1.04
CCDC30-209ENST00000477155 AXIN2Q9Y2T1 843 aa8.55□□□□□ -1.04
CCDC30-209ENST00000477155 NPHP3Q7Z494 1330 aa8.54□□□□□ -1.04
CCDC30-209ENST00000477155 RLBP1P12271 317 aa8.54□□□□□ -1.04
CCDC30-209ENST00000477155 BRINP3Q76B58 766 aa8.54□□□□□ -1.04
CCDC30-209ENST00000477155 CFAP44Q96MT7 982 aa8.54□□□□□ -1.04
CCDC30-209ENST00000477155 IFT57Q9NWB7 429 aa8.54□□□□□ -1.04
CCDC30-209ENST00000477155 ARHGEF10O15013 1369 aa8.54□□□□□ -1.04
CCDC30-209ENST00000477155 KRT24Q2M2I5 525 aa8.53□□□□□ -1.04
CCDC30-209ENST00000477155 C8orf58Q8NAV2 365 aa8.53□□□□□ -1.04
CCDC30-209ENST00000477155 MARF1Q9Y4F3 1742 aaKnown RBP8.53□□□□□ -1.04
CCDC30-209ENST00000477155 ZNF853P0CG23 659 aa8.53□□□□□ -1.04
CCDC30-209ENST00000477155 PDE3AQ14432 1141 aa8.53□□□□□ -1.04
CCDC30-209ENST00000477155 CHRNA2Q15822 529 aa8.53□□□□□ -1.04
CCDC30-209ENST00000477155 NOB1Q9ULX3 412 aaKnown RBP8.53□□□□□ -1.04
CCDC30-209ENST00000477155 SKAP1Q86WV1 359 aa8.52□□□□□ -1.04
CCDC30-209ENST00000477155 ANKRD24Q8TF21 1146 aa8.52□□□□□ -1.04
CCDC30-209ENST00000477155 KIF24Q5T7B8 1368 aa8.52□□□□□ -1.05
CCDC30-209ENST00000477155 NCOA3Q9Y6Q9 1424 aa8.52□□□□□ -1.05
CCDC30-209ENST00000477155 VAMP4O75379 141 aa8.52□□□□□ -1.05
CCDC30-209ENST00000477155 CT47B1P0C2W7 299 aaPredicted RBP8.52□□□□□ -1.05
CCDC30-209ENST00000477155 ZKSCAN2Q63HK3 967 aa8.52□□□□□ -1.05
CCDC30-209ENST00000477155 KDRP35968 1356 aa8.52□□□□□ -1.05
CCDC30-209ENST00000477155 DLG5Q8TDM6 1919 aa8.52□□□□□ -1.05
CCDC30-209ENST00000477155 TWISTNBQ3B726 338 aaPredicted RBP8.52□□□□□ -1.05
CCDC30-209ENST00000477155 FTSJ3Q8IY81 847 aaKnown RBP8.52□□□□□ -1.05
CCDC30-209ENST00000477155 GAS2L2Q8NHY3 880 aa8.52□□□□□ -1.05
CCDC30-209ENST00000477155 DCCP43146 1447 aa8.51□□□□□ -1.05
CCDC30-209ENST00000477155 NFAT5O94916 1531 aa8.51□□□□□ -1.05
CCDC30-209ENST00000477155 GNAT3A8MTJ3 354 aa8.51□□□□□ -1.05
CCDC30-209ENST00000477155 USP19O94966 1318 aa8.51□□□□□ -1.05
CCDC30-209ENST00000477155 TRIM27P14373 513 aa8.5□□□□□ -1.05
CCDC30-209ENST00000477155 DZIP1LQ8IYY4 767 aaKnown RBP8.5□□□□□ -1.05
CCDC30-209ENST00000477155 LTN1O94822 1766 aa8.5□□□□□ -1.05
CCDC30-209ENST00000477155 CHL1O00533 1208 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms