RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 KIF24Q5T7B8 1368 aa29.95■■■□□ 2.38
CCDC7-206ENST00000476558 C19orf44Q9H6X5 657 aa29.94■■■□□ 2.38
CCDC7-206ENST00000476558 FANCIQ9NVI1 1328 aa29.94■■■□□ 2.38
CCDC7-206ENST00000476558 RARSP54136 660 aaKnown RBP29.93■■■□□ 2.38
CCDC7-206ENST00000476558 NCOA3Q9Y6Q9 1424 aa29.93■■■□□ 2.38
CCDC7-206ENST00000476558 SOX12O15370 315 aa29.92■■■□□ 2.38
CCDC7-206ENST00000476558 HSPA2P54652 639 aa29.92■■■□□ 2.38
CCDC7-206ENST00000476558 CT47B1P0C2W7 299 aaPredicted RBP29.92■■■□□ 2.38
CCDC7-206ENST00000476558 DLG5Q8TDM6 1919 aa29.91■■■□□ 2.38
CCDC7-206ENST00000476558 PAK3O75914 559 aaPredicted RBP29.91■■■□□ 2.38
CCDC7-206ENST00000476558 ORAI2Q96SN7 254 aa29.91■■■□□ 2.38
CCDC7-206ENST00000476558 LMTK3Q96Q04 1460 aa29.9■■■□□ 2.38
CCDC7-206ENST00000476558 PSME1Q06323 249 aa29.89■■■□□ 2.38
CCDC7-206ENST00000476558 NUTM2GQ5VZR2 741 aa29.89■■■□□ 2.38
CCDC7-206ENST00000476558 AEBP1Q8IUX7 1158 aa29.89■■■□□ 2.38
CCDC7-206ENST00000476558 TSR2Q969E8 191 aaKnown RBP29.89■■■□□ 2.38
CCDC7-206ENST00000476558 C1orf167Q5SNV9 1468 aa29.89■■■□□ 2.37
CCDC7-206ENST00000476558 ARHGEF10O15013 1369 aa29.88■■■□□ 2.37
CCDC7-206ENST00000476558 SULT6B1Q6IMI4 303 aa29.88■■■□□ 2.37
CCDC7-206ENST00000476558 KIF1AQ12756 1690 aa29.87■■■□□ 2.37
CCDC7-206ENST00000476558 TMEM94Q12767 1356 aa29.86■■■□□ 2.37
CCDC7-206ENST00000476558 DCCP43146 1447 aa29.86■■■□□ 2.37
CCDC7-206ENST00000476558 AMPHP49418 695 aa29.86■■■□□ 2.37
CCDC7-206ENST00000476558 STRCQ7RTU9 1775 aa29.85■■■□□ 2.37
CCDC7-206ENST00000476558 NFAT5O94916 1531 aa29.85■■■□□ 2.37
CCDC7-206ENST00000476558 PDE3AQ14432 1141 aa29.85■■■□□ 2.37
CCDC7-206ENST00000476558 KDRP35968 1356 aa29.84■■■□□ 2.37
CCDC7-206ENST00000476558 TRPM3Q9HCF6 1732 aaPredicted RBP29.84■■■□□ 2.37
CCDC7-206ENST00000476558 HOXC9P31274 260 aa29.83■■■□□ 2.37
CCDC7-206ENST00000476558 EXOSC9Q06265 439 aaKnown RBP29.83■■■□□ 2.37
CCDC7-206ENST00000476558 FOXO3O43524 673 aa29.82■■■□□ 2.36
CCDC7-206ENST00000476558 CALD1Q05682 793 aaKnown RBP29.82■■■□□ 2.36
CCDC7-206ENST00000476558 LMOD3Q0VAK6 560 aa29.82■■■□□ 2.36
CCDC7-206ENST00000476558 MST1RQ04912 1400 aa29.82■■■□□ 2.36
CCDC7-206ENST00000476558 IGSF1Q8N6C5 1336 aa29.82■■■□□ 2.36
CCDC7-206ENST00000476558 RTL1A6NKG5 1358 aa29.81■■■□□ 2.36
CCDC7-206ENST00000476558 LTN1O94822 1766 aa29.8■■■□□ 2.36
CCDC7-206ENST00000476558 ZNF853P0CG23 659 aa29.8■■■□□ 2.36
CCDC7-206ENST00000476558 EYA1Q99502 592 aa29.79■■■□□ 2.36
CCDC7-206ENST00000476558 PHRF1Q9P1Y6 1649 aaKnown RBP29.79■■■□□ 2.36
CCDC7-206ENST00000476558 THUMPD2Q9BTF0 503 aaKnown RBP29.78■■■□□ 2.36
CCDC7-206ENST00000476558 IFT57Q9NWB7 429 aa29.78■■■□□ 2.36
CCDC7-206ENST00000476558 SLIT3O75094 1523 aa29.77■■■□□ 2.36
CCDC7-206ENST00000476558 ATF3P18847 181 aa29.76■■■□□ 2.35
CCDC7-206ENST00000476558 GNAI1P63096 354 aa29.75■■■□□ 2.35
CCDC7-206ENST00000476558 KCNH5Q8NCM2 988 aa29.75■■■□□ 2.35
CCDC7-206ENST00000476558 XIRP1Q702N8 1843 aaKnown RBP29.74■■■□□ 2.35
CCDC7-206ENST00000476558 KRT28Q7Z3Y7 464 aa29.74■■■□□ 2.35
CCDC7-206ENST00000476558 IP6K1Q92551 441 aa29.73■■■□□ 2.35
CCDC7-206ENST00000476558 CFAP44Q96MT7 982 aa29.73■■■□□ 2.35
CCDC7-206ENST00000476558 FAM83GA6ND36 823 aa29.72■■■□□ 2.35
CCDC7-206ENST00000476558 XPCQ01831 940 aaPredicted RBP29.72■■■□□ 2.35
CCDC7-206ENST00000476558 USP19O94966 1318 aa29.71■■■□□ 2.35
CCDC7-206ENST00000476558 BCL2L13Q9BXK5 485 aa29.71■■■□□ 2.35
CCDC7-206ENST00000476558 ALS2Q96Q42 1657 aa29.71■■■□□ 2.35
CCDC7-206ENST00000476558 FRAT1Q92837 279 aaPredicted RBP29.71■■■□□ 2.35
CCDC7-206ENST00000476558 CANXP27824 592 aaKnown RBP29.7■■■□□ 2.34
CCDC7-206ENST00000476558 CADPS2Q86UW7 1296 aa29.7■■■□□ 2.34
CCDC7-206ENST00000476558 PANK1Q8TE04 598 aa29.69■■■□□ 2.34
CCDC7-206ENST00000476558 SSH1Q8WYL5 1049 aa29.69■■■□□ 2.34
CCDC7-206ENST00000476558 ZNF428Q96B54 188 aa29.69■■■□□ 2.34
CCDC7-206ENST00000476558 MBIPQ9NS73 344 aa29.69■■■□□ 2.34
CCDC7-206ENST00000476558 LAS1LQ9Y4W2 734 aaKnown RBP29.68■■■□□ 2.34
CCDC7-206ENST00000476558 KDM2BQ8NHM5 1336 aa29.67■■■□□ 2.34
CCDC7-206ENST00000476558 GCP02774 474 aa29.67■■■□□ 2.34
CCDC7-206ENST00000476558 DCTN1Q14203 1278 aa29.67■■■□□ 2.34
CCDC7-206ENST00000476558 ALDH1L2Q3SY69 923 aa29.67■■■□□ 2.34
CCDC7-206ENST00000476558 MTHFSDQ2M296 383 aaKnown RBP29.66■■■□□ 2.34
CCDC7-206ENST00000476558 MSH6P52701 1360 aa29.66■■■□□ 2.34
CCDC7-206ENST00000476558 ARHGEF25Q86VW2 580 aa29.66■■■□□ 2.34
CCDC7-206ENST00000476558 RLBP1P12271 317 aa29.65■■■□□ 2.34
CCDC7-206ENST00000476558 SMC4Q9NTJ3 1288 aa29.65■■■□□ 2.34
CCDC7-206ENST00000476558 BRPF1P55201 1214 aaPredicted RBP29.64■■■□□ 2.34
CCDC7-206ENST00000476558 ZKSCAN2Q63HK3 967 aa29.64■■■□□ 2.34
CCDC7-206ENST00000476558 TNNQ9UQP3 1299 aa29.64■■■□□ 2.34
CCDC7-206ENST00000476558 COG6Q9Y2V7 657 aa29.64■■■□□ 2.34
CCDC7-206ENST00000476558 VAMP4O75379 141 aa29.64■■■□□ 2.33
CCDC7-206ENST00000476558 CRB1P82279 1406 aa29.62■■■□□ 2.33
CCDC7-206ENST00000476558 AAMPQ13685 434 aa29.61■■■□□ 2.33
CCDC7-206ENST00000476558 CHL1O00533 1208 aa29.61■■■□□ 2.33
CCDC7-206ENST00000476558 GAS2L2Q8NHY3 880 aa29.61■■■□□ 2.33
CCDC7-206ENST00000476558 MCM10Q7L590 875 aa29.6■■■□□ 2.33
CCDC7-206ENST00000476558 LTV1Q96GA3 475 aaPredicted RBP29.6■■■□□ 2.33
CCDC7-206ENST00000476558 TSPYL6Q8N831 410 aa29.59■■■□□ 2.33
CCDC7-206ENST00000476558 MED1Q15648 1581 aaPredicted RBP29.59■■■□□ 2.33
CCDC7-206ENST00000476558 MS4A1P11836 297 aa29.59■■■□□ 2.33
CCDC7-206ENST00000476558 CENPQQ7L2Z9 268 aaPredicted RBP29.59■■■□□ 2.33
CCDC7-206ENST00000476558 RBM19Q9Y4C8 960 aaKnown RBP29.59■■■□□ 2.33
CCDC7-206ENST00000476558 HTATSF1O43719 755 aaKnown RBP29.58■■■□□ 2.33
CCDC7-206ENST00000476558 LMOD2Q6P5Q4 547 aa29.57■■■□□ 2.32
CCDC7-206ENST00000476558 NPHP3Q7Z494 1330 aa29.57■■■□□ 2.32
CCDC7-206ENST00000476558 CLUAP1Q96AJ1 413 aa29.57■■■□□ 2.32
CCDC7-206ENST00000476558 KIF16BQ96L93 1317 aa29.57■■■□□ 2.32
CCDC7-206ENST00000476558 TRIM27P14373 513 aa29.57■■■□□ 2.32
CCDC7-206ENST00000476558 DZIP1LQ8IYY4 767 aaKnown RBP29.57■■■□□ 2.32
CCDC7-206ENST00000476558 NOB1Q9ULX3 412 aaKnown RBP29.57■■■□□ 2.32
CCDC7-206ENST00000476558 PXDNQ92626 1479 aa29.56■■■□□ 2.32
CCDC7-206ENST00000476558 ZNF335Q9H4Z2 1342 aaPredicted RBP29.56■■■□□ 2.32
CCDC7-206ENST00000476558 NBPF6Q5VWK0 638 aa29.56■■■□□ 2.32
CCDC7-206ENST00000476558 ATF7IPQ6VMQ6 1270 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms