RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 CTC1Q2NKJ3 1217 aa9.82□□□□□ -0.84
SSR3-206ENST00000476217 AVPP01185 164 aa9.81□□□□□ -0.84
SSR3-206ENST00000476217 SMPD1P17405 629 aa9.81□□□□□ -0.84
SSR3-206ENST00000476217 DHX9Q08211 1270 aaKnown RBP9.81□□□□□ -0.84
SSR3-206ENST00000476217 RNF20Q5VTR2 975 aa9.81□□□□□ -0.84
SSR3-206ENST00000476217 PROSER2Q86WR7 435 aaPredicted RBP9.81□□□□□ -0.84
SSR3-206ENST00000476217 PCDHB9Q9Y5E1 797 aa9.81□□□□□ -0.84
SSR3-206ENST00000476217 POM121Q96HA1 1249 aa9.8□□□□□ -0.84
SSR3-206ENST00000476217 KCTD15Q96SI1 283 aaPredicted RBP9.8□□□□□ -0.84
SSR3-206ENST00000476217 J3QL48 77 aa9.79□□□□□ -0.84
SSR3-206ENST00000476217 FSHRP23945 695 aa9.78□□□□□ -0.84
SSR3-206ENST00000476217 GRM5P41594 1212 aa9.78□□□□□ -0.84
SSR3-206ENST00000476217 VAC14Q08AM6 782 aa9.78□□□□□ -0.84
SSR3-206ENST00000476217 SEMA3FQ13275 785 aa9.78□□□□□ -0.84
SSR3-206ENST00000476217 NNTQ13423 1086 aa9.78□□□□□ -0.84
SSR3-206ENST00000476217 CRIPAKQ8N1N5 446 aa9.78□□□□□ -0.84
SSR3-206ENST00000476217 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
SSR3-206ENST00000476217 ESPNB1AK53 854 aa9.77□□□□□ -0.85
SSR3-206ENST00000476217 SMCPP49901 116 aaPredicted RBP9.77□□□□□ -0.85
SSR3-206ENST00000476217 Q6ZNB5 142 aa9.77□□□□□ -0.85
SSR3-206ENST00000476217 CCDC116Q8IYX3 515 aa9.77□□□□□ -0.85
SSR3-206ENST00000476217 EMILIN1Q9Y6C2 1016 aa9.77□□□□□ -0.85
SSR3-206ENST00000476217 FNBP4Q8N3X1 1017 aaPredicted RBP9.76□□□□□ -0.85
SSR3-206ENST00000476217 PGPEP1Q9NXJ5 209 aa9.76□□□□□ -0.85
SSR3-206ENST00000476217 ZMYND15Q9H091 742 aa9.75□□□□□ -0.85
SSR3-206ENST00000476217 INTS6LQ5JSJ4 861 aaKnown RBP9.73□□□□□ -0.85
SSR3-206ENST00000476217 CEP126Q9P2H0 1117 aa9.73□□□□□ -0.85
SSR3-206ENST00000476217 AXIN1O15169 862 aa9.72□□□□□ -0.85
SSR3-206ENST00000476217 SLFNL1Q499Z3 407 aa9.72□□□□□ -0.85
SSR3-206ENST00000476217 HPS1Q92902 700 aa9.72□□□□□ -0.85
SSR3-206ENST00000476217 NR3C2P08235 984 aa9.71□□□□□ -0.86
SSR3-206ENST00000476217 MYT1Q01538 1121 aa9.71□□□□□ -0.86
SSR3-206ENST00000476217 ALG2Q9H553 416 aa9.71□□□□□ -0.86
SSR3-206ENST00000476217 TRAK2O60296 914 aa9.7□□□□□ -0.86
SSR3-206ENST00000476217 GIGYF1O75420 1035 aaPredicted RBP9.7□□□□□ -0.86
SSR3-206ENST00000476217 WDR4P57081 412 aaKnown RBP9.7□□□□□ -0.86
SSR3-206ENST00000476217 PPP1R26Q5T8A7 1209 aaPredicted RBP9.7□□□□□ -0.86
SSR3-206ENST00000476217 TRAF7Q6Q0C0 670 aa9.7□□□□□ -0.86
SSR3-206ENST00000476217 C14orf37Q86TY3 774 aa9.7□□□□□ -0.86
SSR3-206ENST00000476217 ZCCHC6Q5VYS8 1495 aaKnown RBP9.7□□□□□ -0.86
SSR3-206ENST00000476217 CAPN5O15484 640 aaPredicted RBP9.69□□□□□ -0.86
SSR3-206ENST00000476217 TIMP2P16035 220 aa9.69□□□□□ -0.86
SSR3-206ENST00000476217 KLF16Q9BXK1 252 aaPredicted RBP9.69□□□□□ -0.86
SSR3-206ENST00000476217 ZIC2O95409 532 aaPredicted RBP9.68□□□□□ -0.86
SSR3-206ENST00000476217 MAP7D1Q3KQU3 841 aa9.68□□□□□ -0.86
SSR3-206ENST00000476217 NFATC2IPQ8NCF5 419 aa9.68□□□□□ -0.86
SSR3-206ENST00000476217 ERVH48-1M5A8F1 160 aa9.67□□□□□ -0.86
SSR3-206ENST00000476217 LZTS3O60299 673 aaPredicted RBP9.67□□□□□ -0.86
SSR3-206ENST00000476217 RNF135Q8IUD6 432 aa9.67□□□□□ -0.86
SSR3-206ENST00000476217 SIRT1Q96EB6 747 aa9.67□□□□□ -0.86
SSR3-206ENST00000476217 ABCC9O60706 1549 aa9.66□□□□□ -0.86
SSR3-206ENST00000476217 ITPKCQ96DU7 683 aa9.66□□□□□ -0.86
SSR3-206ENST00000476217 ESF1Q9H501 851 aaKnown RBP9.66□□□□□ -0.86
SSR3-206ENST00000476217 AAASQ9NRG9 546 aa9.66□□□□□ -0.86
SSR3-206ENST00000476217 UPP2O95045 317 aa9.65□□□□□ -0.86
SSR3-206ENST00000476217 RAB15P59190 212 aa9.65□□□□□ -0.86
SSR3-206ENST00000476217 HDGFL1Q5TGJ6 251 aa9.65□□□□□ -0.86
SSR3-206ENST00000476217 PHTF2Q8N3S3 785 aa9.65□□□□□ -0.86
SSR3-206ENST00000476217 CHIC2Q9UKJ5 165 aa9.65□□□□□ -0.86
SSR3-206ENST00000476217 POM121CA8CG34 1229 aa9.64□□□□□ -0.87
SSR3-206ENST00000476217 GLMNQ92990 594 aa9.64□□□□□ -0.87
SSR3-206ENST00000476217 CALR3Q96L12 384 aaKnown RBP9.64□□□□□ -0.87
SSR3-206ENST00000476217 MYCP01106 439 aaPredicted RBP9.63□□□□□ -0.87
SSR3-206ENST00000476217 USP4Q13107 963 aa9.63□□□□□ -0.87
SSR3-206ENST00000476217 CC2D2BQ6DHV5 1058 aa9.63□□□□□ -0.87
SSR3-206ENST00000476217 Q6ZVU0 165 aa9.63□□□□□ -0.87
SSR3-206ENST00000476217 DOLKQ9UPQ8 538 aa9.63□□□□□ -0.87
SSR3-206ENST00000476217 PCDHB11Q9Y5F2 797 aa9.63□□□□□ -0.87
SSR3-206ENST00000476217 ERVK-9P63128 1117 aa9.62□□□□□ -0.87
SSR3-206ENST00000476217 SCARF1Q14162 830 aa9.62□□□□□ -0.87
SSR3-206ENST00000476217 MEIOBQ8N635 442 aa9.62□□□□□ -0.87
SSR3-206ENST00000476217 ZNF784Q8NCA9 323 aaPredicted RBP9.62□□□□□ -0.87
SSR3-206ENST00000476217 TSEN34Q9BSV6 310 aaKnown RBP9.62□□□□□ -0.87
SSR3-206ENST00000476217 SENP2Q9HC62 589 aa9.62□□□□□ -0.87
SSR3-206ENST00000476217 PLPP7Q8NBV4 271 aa9.61□□□□□ -0.87
SSR3-206ENST00000476217 KIFC2Q96AC6 838 aa9.61□□□□□ -0.87
SSR3-206ENST00000476217 ZFAND3Q9H8U3 227 aa9.61□□□□□ -0.87
SSR3-206ENST00000476217 TMPRSS4Q9NRS4 437 aa9.61□□□□□ -0.87
SSR3-206ENST00000476217 MRPL14Q6P1L8 145 aaKnown RBP9.6□□□□□ -0.87
SSR3-206ENST00000476217 ATP13A2Q9NQ11 1180 aa9.6□□□□□ -0.87
SSR3-206ENST00000476217 ST8SIA5O15466 376 aa9.59□□□□□ -0.87
SSR3-206ENST00000476217 CYP2U1Q7Z449 544 aa9.59□□□□□ -0.87
SSR3-206ENST00000476217 ADAMTS19Q8TE59 1207 aa9.59□□□□□ -0.87
SSR3-206ENST00000476217 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
SSR3-206ENST00000476217 LILRA1O75019 489 aa9.58□□□□□ -0.88
SSR3-206ENST00000476217 ADH1AP07327 375 aa9.58□□□□□ -0.88
SSR3-206ENST00000476217 SKIP12755 728 aa9.58□□□□□ -0.88
SSR3-206ENST00000476217 EML3Q32P44 896 aa9.58□□□□□ -0.88
SSR3-206ENST00000476217 LINC00528Q8N1L1 170 aa9.58□□□□□ -0.88
SSR3-206ENST00000476217 CYLDQ9NQC7 956 aa9.58□□□□□ -0.88
SSR3-206ENST00000476217 ZNF777Q9ULD5 760 aaPredicted RBP9.58□□□□□ -0.88
SSR3-206ENST00000476217 ATP9BO43861 1147 aa9.57□□□□□ -0.88
SSR3-206ENST00000476217 PLEKHM2Q8IWE5 1019 aa9.57□□□□□ -0.88
SSR3-206ENST00000476217 ATP5J2-PTCD1G3V325 749 aa9.56□□□□□ -0.88
SSR3-206ENST00000476217 DCAF1Q9Y4B6 1507 aa9.56□□□□□ -0.88
SSR3-206ENST00000476217 OXLD1Q5BKU9 147 aa9.55□□□□□ -0.88
SSR3-206ENST00000476217 USP17L5A8MUK1 530 aa9.54□□□□□ -0.88
SSR3-206ENST00000476217 LCE2BO14633 110 aa9.54□□□□□ -0.88
SSR3-206ENST00000476217 GNRH1P01148 92 aa9.54□□□□□ -0.88
SSR3-206ENST00000476217 CBLBQ13191 982 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms